; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12127 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12127
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosomal protein
Genome locationctg1837:779898..784649
RNA-Seq ExpressionCucsat.G12127
SyntenyCucsat.G12127
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048381.1 Ribosomal protein S21 family protein isoform 1 [Cucumis melo var. makuwa]4.61e-5493.07Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  R
        R
Subjt:  R

XP_004149720.1 uncharacterized protein LOC101216913 [Cucumis sativus]4.07e-61100Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  RGL
        RGL
Subjt:  RGL

XP_008461813.1 PREDICTED: uncharacterized protein LOC103500324 [Cucumis melo]1.34e-5593.14Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  RG
        RG
Subjt:  RG

XP_022934889.1 uncharacterized protein LOC111441929 [Cucurbita moschata]1.59e-5084.26Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI
        MNSL+RN+SCSIRSS+ TNCLQH     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ HHIKNSEKRVLARK LERKI+S+DLARKLKAI
Subjt:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

XP_022982723.1 uncharacterized protein LOC111481507 [Cucurbita maxima]2.26e-5084.26Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI
        MNSL+RN+SCSIRSS+ TNCL+H     QQWRGIRVKVL G LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKI+S+DLARKLKAI
Subjt:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

TrEMBL top hitse value%identityAlignment
A0A0A0LCD1 Uncharacterized protein1.97e-61100Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  RGL
        RGL
Subjt:  RGL

A0A1S3CG17 uncharacterized protein LOC1035003246.50e-5693.14Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  RG
        RG
Subjt:  RG

A0A5A7U491 Ribosomal protein S21 family protein isoform 12.23e-5493.07Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MNSLARNISCSIRSSI TNCLQ+QQWRGIRVKVL+GGLERALTVLQRKMQSSGIERLIKREQ+HHIKNSEKRVLARKTLERKI+S+DLARKLK ILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  R
        R
Subjt:  R

A0A6J1F3V2 uncharacterized protein LOC1114419297.69e-5184.26Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI
        MNSL+RN+SCSIRSS+ TNCLQH     QQWRGIRVKVL G LERALT LQRKM+SSGIERLIKREQ HHIKNSEKRVLARK LERKI+S+DLARKLKAI
Subjt:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

A0A6J1J5L6 uncharacterized protein LOC1114815071.09e-5084.26Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI
        MNSL+RN+SCSIRSS+ TNCL+H     QQWRGIRVKVL G LERALT LQRKMQSSGIERLIKREQ HHIKNSEKRVLARK LERKI+S+DLARKLKAI
Subjt:  MNSLARNISCSIRSSIPTNCLQH-----QQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAI

Query:  LIKKVRGL
        LIKKVRGL
Subjt:  LIKKVRGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein7.9e-2562.14Show/hide
Query:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV
        MN++A+ ++  +  + P+   Q QQ RGIRVKV    L++ALT+LQ+KMQSSG+ERLIK  Q HHIKNSEK+VLARK LER+I+S D ARKL++ILIKKV
Subjt:  MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKV

Query:  RGL
        RGL
Subjt:  RGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCCCACCAATTGTCTACAGCACCAGCAATGGAGGGGGATCCGAGTGAAGGTGTTGAGAGGGGG
TCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGTGGAATCGAGCGACTGATTAAGCGTGAACAAGTTCATCATATCAAGAATTCCGAGAAACGGGTTT
TGGCCAGAAAGACTTTAGAGCGCAAAATTCAATCCAAGGACCTCGCTCGCAAACTCAAAGCCATCCTTATAAAGAAAGTCAGGGGTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCGTTGGCGCGGAACATTTCGTGCTCCATCAGATCTTCGATTCCCACCAATTGTCTACAGCACCAGCAATGGAGGGGGATCCGAGTGAAGGTGTTGAGAGGGGG
TCTAGAGCGGGCACTGACAGTTCTGCAAAGGAAGATGCAATCGAGTGGAATCGAGCGACTGATTAAGCGTGAACAAGTTCATCATATCAAGAATTCCGAGAAACGGGTTT
TGGCCAGAAAGACTTTAGAGCGCAAAATTCAATCCAAGGACCTCGCTCGCAAACTCAAAGCCATCCTTATAAAGAAAGTCAGGGGTCTGTAA
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIPTNCLQHQQWRGIRVKVLRGGLERALTVLQRKMQSSGIERLIKREQVHHIKNSEKRVLARKTLERKIQSKDLARKLKAILIKKVRGL