| GenBank top hits | e value | %identity | Alignment |
|---|
| PPD86023.1 hypothetical protein GOBAR_DD17039 [Gossypium barbadense] | 1.24e-70 | 93.22 | Show/hide |
Query: KAMNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKEL
KAMNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKEL
Subjt: KAMNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKEL
Query: DHLKNAFEV-VERHNYTL
DHLKNAFEV VE+H+ L
Subjt: DHLKNAFEV-VERHNYTL
|
|
| TYH73866.1 hypothetical protein ES332_D05G358000v1 [Gossypium tomentosum] | 2.65e-70 | 92.24 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDEN+LFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| XP_012440803.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Gossypium raimondii] | 9.26e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| XP_016751758.2 DNA-directed RNA polymerases II, IV and V subunit 11 [Gossypium hirsutum] | 3.31e-70 | 93.81 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHN
LKNAFEV +E+H+
Subjt: LKNAFEV-VERHN
|
|
| XP_017643821.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Gossypium arboreum] | 1.15e-70 | 94.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHN
LKNAFEV VE+H+
Subjt: LKNAFEV-VERHN
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0D2S8I8 RNA_pol_L_2 domain-containing protein | 4.49e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| A0A1U8I3N0 DNA-directed RNA polymerases II, IV and V subunit 11 | 4.49e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| A0A5D2CSD3 RNA_pol_L_2 domain-containing protein | 4.49e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| A0A5D2V4D0 RNA_pol_L_2 domain-containing protein | 4.49e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| A0A5J5RLJ3 RNA_pol_L_2 domain-containing protein | 4.49e-71 | 93.1 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAA+FTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKI+VRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV-VERHNYTL
LKNAFEV VE+H+ L
Subjt: LKNAFEV-VERHNYTL
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P52435 DNA-directed RNA polymerase II subunit RPB11-a | 1.3e-26 | 52.34 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV
L+ F V
Subjt: LKNAFEV
|
|
| Q32P79 DNA-directed RNA polymerase II subunit RPB11 | 1.3e-26 | 52.34 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFEV
L+ F V
Subjt: LKNAFEV
|
|
| Q38859 DNA-directed RNA polymerases II, IV and V subunit 11 | 1.9e-51 | 91.51 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFE
LKN FE
Subjt: LKNAFE
|
|
| Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 | 7.4e-27 | 49.52 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDR+E FV+P+G KKV+ RDTKI NA+ FTI +E+HTIGN++RMQL D++++FAGY++PHPL++ + +RI T + ++P++ +++ L +E
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAF
L+N+F
Subjt: LKNAF
|
|
| Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 | 3.7e-26 | 52.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK+ E DTK+ NAA FTI +E+HT+GN++R QL +D NVLFAGYK+PHPL++K ++RI TT+ SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFE
+ F+
Subjt: LKNAFE
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G29540.1 RNApolymerase 14 kDa subunit | 1.0e-07 | 30.38 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
|
|
| AT2G29540.2 RNApolymerase 14 kDa subunit | 1.0e-07 | 30.38 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
|
|
| AT3G52090.1 DNA-directed RNA polymerase, RBP11-like | 1.4e-52 | 91.51 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFE
LKN FE
Subjt: LKNAFE
|
|
| AT3G52090.2 DNA-directed RNA polymerase, RBP11-like | 7.8e-48 | 71.32 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVR
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
Query: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
IHTTSQSSPMQAYNQAINDLDKELD+LKN FE
Subjt: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
|
|
