; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12133 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12133
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionpolygalacturonase-like
Genome locationctg1837:828683..830342
RNA-Seq ExpressionCucsat.G12133
SyntenyCucsat.G12133
Gene Ontology termsGO:0009901 - anther dehiscence (biological process)
GO:0010047 - fruit dehiscence (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048359.1 polygalacturonase-like [Cucumis melo var. makuwa]1.14e-18283.91Show/hide
Query:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
         +YLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
Subjt:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY

Query:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD
        LKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ L       AVTFYQCINLVVSNLMFKD
Subjt:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD

Query:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG--------------------------DDCISIVSGSRNVQAMDITCGPG
        AQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG                          DDCISIVSGSRNV+AMDITCGPG
Subjt:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG--------------------------DDCISIVSGSRNVQAMDITCGPG

Query:  HGISIGSLGADNSEAEV
        HGISIGSLGA+NSEAEV
Subjt:  HGISIGSLGADNSEAEV

TYK01108.1 polygalacturonase-like [Cucumis melo var. makuwa]4.11e-19793.81Show/hide
Query:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
         +YLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
Subjt:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY

Query:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD
        LKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ LPCKRAPTAVTFYQCINLVVSNLMFKD
Subjt:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD

Query:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        AQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNV+AMDITCGPGHGISIGSLGA+NSEAEV
Subjt:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV

XP_008461801.1 PREDICTED: polygalacturonase-like [Cucumis melo]3.65e-21794.9Show/hide
Query:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
        MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFE
Subjt:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE

Query:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK
        LAWKEACSSRKATLLVPKGRTYYLKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ LPCK
Subjt:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK

Query:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
        RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNV+AMDITCGPGHGI
Subjt:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI

Query:  SIGSLGADNSEAEV
        SIGSLGA+NSEAEV
Subjt:  SIGSLGADNSEAEV

XP_011651773.1 polygalacturonase [Cucumis sativus]6.66e-23299.36Show/hide
Query:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
        MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
Subjt:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE

Query:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK
        LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVN+GLPCK
Subjt:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK

Query:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
        RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
Subjt:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI

Query:  SIGSLGADNSEAEV
        SIGSLGADNSEAEV
Subjt:  SIGSLGADNSEAEV

XP_038905664.1 polygalacturonase-like [Benincasa hispida]4.93e-19487.82Show/hide
Query:  MHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELA
        MHQQN LFIFFIAFSLFSLCFG+YLEDP PVSQYHDQI+S YP         NTDFHS M TK R  RGSS SGSTKVVNVDDFGAKGNG DD+KAFELA
Subjt:  MHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELA

Query:  WKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRA
        W+EACSSRKATLLVPKGRTYYLKPI FSGPCRSPLTLKINGMIKAS R+SDY+ND RRHWLKF  VDNFVVEGNGII+GNGRKWWQNSCKVN+ LPC+RA
Subjt:  WKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRA

Query:  PTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISI
        PTAVTFYQCINLVV+NLMFK+AQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISI
Subjt:  PTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISI

Query:  GSLGADNSEAEV
        GSLGA NSEAEV
Subjt:  GSLGADNSEAEV

TrEMBL top hitse value%identityAlignment
A0A0A0LD18 Uncharacterized protein3.22e-23299.36Show/hide
Query:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
        MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
Subjt:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE

Query:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK
        LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVN+GLPCK
Subjt:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK

Query:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
        RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
Subjt:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI

Query:  SIGSLGADNSEAEV
        SIGSLGADNSEAEV
Subjt:  SIGSLGADNSEAEV

A0A1S3CG06 polygalacturonase-like1.77e-21794.9Show/hide
Query:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE
        MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFE
Subjt:  MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFE

Query:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK
        LAWKEACSSRKATLLVPKGRTYYLKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ LPCK
Subjt:  LAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCK

Query:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI
        RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNV+AMDITCGPGHGI
Subjt:  RAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGI

Query:  SIGSLGADNSEAEV
        SIGSLGA+NSEAEV
Subjt:  SIGSLGADNSEAEV

A0A5A7U4J0 Polygalacturonase-like5.51e-18383.91Show/hide
Query:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
         +YLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
Subjt:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY

Query:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD
        LKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ L       AVTFYQCINLVVSNLMFKD
Subjt:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD

Query:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG--------------------------DDCISIVSGSRNVQAMDITCGPG
        AQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG                          DDCISIVSGSRNV+AMDITCGPG
Subjt:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTG--------------------------DDCISIVSGSRNVQAMDITCGPG

Query:  HGISIGSLGADNSEAEV
        HGISIGSLGA+NSEAEV
Subjt:  HGISIGSLGADNSEAEV

A0A5D3BPX8 Polygalacturonase-like1.99e-19793.81Show/hide
Query:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
         +YLEDPFPVSQYHDQIY+ YPTPASLYT RNTDFHSS  TKKR DRGSSFS STKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY
Subjt:  GSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYY

Query:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD
        LKPI FSGPCRSPLTLKINGMIKASTRISDYEND RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ LPCKRAPTAVTFYQCINLVVSNLMFKD
Subjt:  LKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKD

Query:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        AQQMHLTFQKCT VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNV+AMDITCGPGHGISIGSLGA+NSEAEV
Subjt:  AQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV

A0A6J1J4X9 polygalacturonase3.50e-17479.23Show/hide
Query:  MHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFH-SSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFEL
        MHQ     IFFI+F LFSLCFGS+ E P PVSQYHD IY  YP P       NT F+ S+M T  R +R SS SGS K+VNVDDFGAKGNGQDD+KAFEL
Subjt:  MHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFH-SSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFEL

Query:  AWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKR
        AWKEACSS KA +LVPKGRTYYLKPI FSGPC SPLTLKI+GMIKAS R+SDY++D RRHWLKF  VDNFVVEGNGIINGNGRKWWQNSCKVN+ LPC+ 
Subjt:  AWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKR

Query:  APTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGIS
        APTAVTFYQCINLVV+NL  ++AQQMHLTFQKCT VKALNLRVVAP NSPNTDGIH+TETQN IIRNCVIGTGDDCISIVSGSRNV+A+DITCGPGHGIS
Subjt:  APTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGIS

Query:  IGSLGADNSEAEV
        IGSLGA NSEAEV
Subjt:  IGSLGADNSEAEV

SwissProt top hitse value%identityAlignment
P05117 Polygalacturonase-21.8e-7749.52Show/hide
Query:  QQNRLFIFFIAF-SLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQD-DTKAFELA
        Q+N + +  I F S  S C  + ++D      Y + +  ++      Y S  +    S     + D+        KV+NV  FGAKG+G+  D  AFE A
Subjt:  QQNRLFIFFIAF-SLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQD-DTKAFELA

Query:  WKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKR
        W EACSSR     +VPK + Y LK I FSGPCRS +++KI G ++AS++ISDY++  RR W+ F  V N VV G G INGNG+ WW +SCK+N+ LPC+ 
Subjt:  WKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKR

Query:  APTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGIS
        APTA+TF+ C NL V+NL  K+AQQ+H+ F+ CT V A NL + A   SPNTDG+H++ TQ   I + +IGTGDDCISIVSGS+NVQA +ITCGPGHGIS
Subjt:  APTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGIS

Query:  IGSLGADNSEAEV
        IGSLG+ NSEA V
Subjt:  IGSLGADNSEAEV

P35336 Polygalacturonase9.7e-8755.38Show/hide
Query:  MHQQNRLFIFFIAFSL---FSLCFGSYLEDPFPVSQYHDQIYS-DYPT-PASLYTSRNTDFHSSMMTK------KRPDRG-SSFSGSTKVVNVDDFGAKG
        M  Q R F F I   L   F L + S + +  P   YH + Y  D+   P+ + T  + DF SSM  +      ++ D G      ++K VNVDDFGAKG
Subjt:  MHQQNRLFIFFIAFSL---FSLCFGSYLEDPFPVSQYHDQIYS-DYPT-PASLYTSRNTDFHSSMMTK------KRPDRG-SSFSGSTKVVNVDDFGAKG

Query:  NGQDDTKAFELAWKEACSS-RKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQN
        +G+DDTKAFE AWK ACSS   A LLVPK + Y ++PI FSGPC+S LT++I G I+AS   SDY  DG RHWL F  V N  VEG G INGNG+ WWQN
Subjt:  NGQDDTKAFELAWKEACSS-RKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQN

Query:  SCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQA
        SCK N+ LPCK APTA+TFY+  +++V NL  ++AQQ+H++F  C  V+A NL V AP NSPNTDGIH+T TQN  I +CVIGTGDDCISIV+GSR V+ 
Subjt:  SCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQA

Query:  MDITCGPGHGISIGSLGADNSEAEV
         DITCGPGHGISIGSLG  NSEA V
Subjt:  MDITCGPGHGISIGSLGADNSEAEV

P48978 Polygalacturonase1.3e-7550.47Show/hide
Query:  IFFIAFSLFSLCFGSYLEDPFPVSQYHDQI------YSDYPTPASLYTSR----------NTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQD
        +F ++FS  S C GS  ++   +  Y D +      Y+    P+   T             T   SS          ++ S   K ++VDDFGAKGNG D
Subjt:  IFFIAFSLFSLCFGSYLEDPFPVSQYHDQI------YSDYPTPASLYTSR----------NTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQD

Query:  DTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVN
        DT+AF  AWK ACSS  A +LV   + Y ++PI FSGPC+S LTL+I G I+AS   S Y++    HWL F  V N +V G G INGNG  WW+NSCK+ 
Subjt:  DTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVN

Query:  RGLPC-KRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDIT
           PC   APTAVTF +C NLVV NL  +DAQQ+H+ FQ C  V+A  L V AP +SPNTDGIH+T TQN  I + VIGTGDDCISIVSGS+ VQA DIT
Subjt:  RGLPC-KRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDIT

Query:  CGPGHGISIGSLGADNSEAEV
        CGPGHGISIGSLG D SE  V
Subjt:  CGPGHGISIGSLGADNSEAEV

Q02096 Polygalacturonase1.3e-7854.09Show/hide
Query:  YHDQIYSDYPTPASLYTSRNTDFHSSMMTKKR--PDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPC
        +  + Y  Y  P     S    F  S+++ +R  P  G   S  T  ++VDDFGA+G+G DDTKAFE AWK+ACSS  + L+VP+ + Y LK I FSGPC
Subjt:  YHDQIYSDYPTPASLYTSRNTDFHSSMMTKKR--PDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPC

Query:  RSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQK
        +S L +KI G I+AS+  SD+    R+ W++F ++ N  +EG G  NGNG  WW +SCK  + LPCK APTA+TF  C NL+VS+L  KD+Q+MHL+F K
Subjt:  RSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQK

Query:  CTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        C  V A NL V AP +SPNTDGIHIT TQ   + N VIGTGDDCISI SGS+ V A +ITCGPGHGISIGSLG  NSEA V
Subjt:  CTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV

Q9SFB7 Polygalacturonase QRT29.1e-7751.13Show/hide
Query:  LFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDF---HSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKE
        L +F + F     CF SY   PF    + D ++      +++Y   N      H++  +  +   G +   S +  NV+ FGAK NG DD+KAF  AW+ 
Subjt:  LFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDF---HSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKE

Query:  ACSSRKATLLV-PKGRTYYLKPIIFSGPCRSPLTL-KINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAP
        ACSS     +V PK R Y LK + FSGPC+S L + KI G I+A    SDY+   RRHW+ F  V+N  VEG G I+GNG  WW  SCK+N  LPC  AP
Subjt:  ACSSRKATLLV-PKGRTYYLKPIIFSGPCRSPLTL-KINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAP

Query:  TAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIG
        TAVTF +C NL VSN+  ++AQQMHLTFQ C  VKALNL V +P +SPNTDGIH++ TQN +I++ ++ TGDDCISIVSGS NV+A  ITCGPGHGISIG
Subjt:  TAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIG

Query:  SLGADNSEAEV
        SLG DNSEA V
Subjt:  SLGADNSEAEV

Arabidopsis top hitse value%identityAlignment
AT1G23460.1 Pectin lyase-like superfamily protein3.4e-6347.54Show/hide
Query:  PDRGSSFSGSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFH
        P   S  SG   +VNVD FGA G+G  DDT+AF  AW +ACS+ K+  LVP+GR Y +    F+GPC   L ++I+G I A    S++++  +R WL+F 
Subjt:  PDRGSSFSGSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACSSRKATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFH

Query:  EVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAII
        ++   V +G G+I+G+G KWW  SCK N+  PCK APTA+T      + VS L  +++QQM+    +   V+   + V +PG+SPNTDGIHIT + N I+
Subjt:  EVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAII

Query:  RNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNS
        ++C IGTGDDC+SIV+ S N++  +I CGPGHGISIGSLG DN+
Subjt:  RNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNS

AT1G80170.1 Pectin lyase-like superfamily protein7.9e-6847.96Show/hide
Query:  ASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMI
        +SL  + N +   S++   R    S+   S ++++V +FGAKGNG  DDTKAF  AWK ACSS+ K  +LVP+  T  L+PI  SGPC++ LTL+I+G I
Subjt:  ASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMI

Query:  KASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVV
         A      +E   RR WL FH +    VEG G +NG G++WW+ SCK N   PC+ APTA+TF++C N+ V NL   D+QQMH+    C +V    L+V+
Subjt:  KASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVV

Query:  APGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        AP  SPNTDGIHI+ ++  +I N  + TGDDCISIV  S  +   +I CGPGHGISIGSLG   S  EV
Subjt:  APGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV

AT2G41850.1 polygalacturonase abscission zone A. thaliana9.7e-7452.52Show/hide
Query:  SLYTSRNTDFHSSMMTKKRPD--------RGSSFSGSTKVVNVDDFGAKGNGQ-DDTKAFELAWKEACSSRKA-TLLVPKGRTYYLKPIIFSGPCRSPLT
        ++Y      F S  + K+R D        R S  + +T  V+V DFGAKG+G+ DDT+AF  AWK+ACSS  A  LLVPKG TY LK I  +GPC S LT
Subjt:  SLYTSRNTDFHSSMMTKKRPD--------RGSSFSGSTKVVNVDDFGAKGNGQ-DDTKAFELAWKEACSSRKA-TLLVPKGRTYYLKPIIFSGPCRSPLT

Query:  LKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEG--NGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTK
        ++I G + AS + SDY++  +  W+ F  V+N  V+G   G+++GNG  WWQNSCK N+  PC +APTA+TFY   +L+V NL  ++AQQ+ ++ +KC+ 
Subjt:  LKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEG--NGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTK

Query:  VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        V+  N+ V AP +SPNTDGIHIT TQN  +   +IGTGDDCISI SGS+NVQ  DITCGPGHGISIGSLG DNS+A V
Subjt:  VKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV

AT3G07970.1 Pectin lyase-like superfamily protein6.5e-7851.13Show/hide
Query:  LFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDF---HSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKE
        L +F + F     CF SY   PF    + D ++      +++Y   N      H++  +  +   G +   S +  NV+ FGAK NG DD+KAF  AW+ 
Subjt:  LFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDF---HSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKE

Query:  ACSSRKATLLV-PKGRTYYLKPIIFSGPCRSPLTL-KINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAP
        ACSS     +V PK R Y LK + FSGPC+S L + KI G I+A    SDY+   RRHW+ F  V+N  VEG G I+GNG  WW  SCK+N  LPC  AP
Subjt:  ACSSRKATLLV-PKGRTYYLKPIIFSGPCRSPLTL-KINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAP

Query:  TAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIG
        TAVTF +C NL VSN+  ++AQQMHLTFQ C  VKALNL V +P +SPNTDGIH++ TQN +I++ ++ TGDDCISIVSGS NV+A  ITCGPGHGISIG
Subjt:  TAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIG

Query:  SLGADNSEAEV
        SLG DNSEA V
Subjt:  SLGADNSEAEV

AT3G57510.1 Pectin lyase-like superfamily protein1.9e-7451.46Show/hide
Query:  YTSRNTDFHSSMMTKKRPDRGSSFSGS------TKVVNVDDFGAKGNGQ-DDTKAFELAWKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKIN
        Y   +  F S  + K   D   S   S         V+V +FGAKG+G+ DDT+AF+ AWK+ACS+    T LVPKG+TY LK   F GPC+S    +I 
Subjt:  YTSRNTDFHSSMMTKKRPDRGSSFSGS------TKVVNVDDFGAKGNGQ-DDTKAFELAWKEACSSR-KATLLVPKGRTYYLKPIIFSGPCRSPLTLKIN

Query:  GMIKASTRISDYENDGRRHWLKFHEVDNFVVEG--NGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKAL
        G + AST+ SDY++  + HWL   +V+N  ++G   GIINGNG+ WWQNSCK+++  PC +APTA+T Y   NL V NL  K+AQQ+ ++ +KC KV+  
Subjt:  GMIKASTRISDYENDGRRHWLKFHEVDNFVVEG--NGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKAL

Query:  NLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV
        N+ + APG+SPNTDGIHIT TQN  + N  IGTGDDCISI  G++N+Q  D+TCGPGHGISIGSLG DNS+A V
Subjt:  NLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGCATCAACAAAACCGTTTGTTCATCTTTTTCATAGCATTTTCTCTGTTTTCTCTCTGTTTTGGCAGTTACCTTGAGGACCCATTTCCTGTTTCTCAATATCA
TGATCAAATTTATAGTGATTATCCAACACCTGCATCATTATATACTTCTAGGAACACTGATTTTCACAGCTCGATGATGACAAAGAAGAGACCAGATAGAGGAAGCTCGT
TTTCAGGATCGACAAAGGTGGTGAATGTGGATGATTTTGGAGCTAAGGGAAATGGACAAGACGATACTAAGGCATTTGAGCTTGCTTGGAAGGAGGCTTGTTCTTCTAGG
AAGGCAACTCTTTTGGTTCCTAAAGGAAGAACATACTATCTTAAGCCAATCATTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCAATGGAATGATCAAAGC
TTCTACAAGAATATCTGATTATGAAAACGATGGTCGTCGACATTGGCTTAAATTCCACGAAGTTGATAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGGAATGGCA
GAAAATGGTGGCAAAACTCTTGCAAAGTGAACAGAGGACTTCCTTGCAAGAGAGCACCAACGGCTGTAACTTTTTACCAGTGCATCAACTTGGTTGTGTCTAACCTGATG
TTCAAAGATGCACAACAAATGCATCTAACATTTCAGAAATGCACCAAGGTCAAAGCTTTGAATCTTAGAGTGGTCGCCCCAGGAAATAGTCCCAACACGGATGGAATTCA
CATCACAGAAACTCAAAATGCTATAATAAGAAACTGTGTCATTGGAACAGGGGATGACTGTATTTCAATTGTAAGTGGATCAAGAAATGTTCAAGCAATGGATATCACTT
GTGGGCCAGGTCATGGAATCAGCATTGGAAGCTTGGGAGCTGACAACTCAGAAGCTGAAGTT
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGCATCAACAAAACCGTTTGTTCATCTTTTTCATAGCATTTTCTCTGTTTTCTCTCTGTTTTGGCAGTTACCTTGAGGACCCATTTCCTGTTTCTCAATATCA
TGATCAAATTTATAGTGATTATCCAACACCTGCATCATTATATACTTCTAGGAACACTGATTTTCACAGCTCGATGATGACAAAGAAGAGACCAGATAGAGGAAGCTCGT
TTTCAGGATCGACAAAGGTGGTGAATGTGGATGATTTTGGAGCTAAGGGAAATGGACAAGACGATACTAAGGCATTTGAGCTTGCTTGGAAGGAGGCTTGTTCTTCTAGG
AAGGCAACTCTTTTGGTTCCTAAAGGAAGAACATACTATCTTAAGCCAATCATTTTTTCAGGTCCTTGTAGATCTCCTTTAACACTAAAGATCAATGGAATGATCAAAGC
TTCTACAAGAATATCTGATTATGAAAACGATGGTCGTCGACATTGGCTTAAATTCCACGAAGTTGATAACTTTGTTGTAGAAGGCAATGGTATCATCAATGGGAATGGCA
GAAAATGGTGGCAAAACTCTTGCAAAGTGAACAGAGGACTTCCTTGCAAGAGAGCACCAACGGCTGTAACTTTTTACCAGTGCATCAACTTGGTTGTGTCTAACCTGATG
TTCAAAGATGCACAACAAATGCATCTAACATTTCAGAAATGCACCAAGGTCAAAGCTTTGAATCTTAGAGTGGTCGCCCCAGGAAATAGTCCCAACACGGATGGAATTCA
CATCACAGAAACTCAAAATGCTATAATAAGAAACTGTGTCATTGGAACAGGGGATGACTGTATTTCAATTGTAAGTGGATCAAGAAATGTTCAAGCAATGGATATCACTT
GTGGGCCAGGTCATGGAATCAGCATTGGAAGCTTGGGAGCTGACAACTCAGAAGCTGAAGTT
Protein sequenceShow/hide protein sequence
MKMHQQNRLFIFFIAFSLFSLCFGSYLEDPFPVSQYHDQIYSDYPTPASLYTSRNTDFHSSMMTKKRPDRGSSFSGSTKVVNVDDFGAKGNGQDDTKAFELAWKEACSSR
KATLLVPKGRTYYLKPIIFSGPCRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQNSCKVNRGLPCKRAPTAVTFYQCINLVVSNLM
FKDAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSEAEV