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Cucsat.G12184 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12184
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSel1-like protein
Genome locationctg1837:1819480..1822766
RNA-Seq ExpressionCucsat.G12184
SyntenyCucsat.G12184
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]4.12e-6498Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]2.48e-65100Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]6.85e-6396Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]1.38e-6295Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]3.27e-6193Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TEALNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
TrEMBL top hitse value%identityAlignment
A0A0A0LCP0 Uncharacterized protein1.20e-65100Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A1S3B5I4 uncharacterized protein LOC1034862542.00e-6498Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A5D3DNP0 Sel1-like protein2.00e-6498Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A6J1DSS4 uncharacterized protein LOC1110240623.32e-6396Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
A0A6J1J881 uncharacterized protein LOC1114821716.70e-6395Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)9.7e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
AT5G05360.1 unknown protein4.8e-3568.48Show/hide
Query:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
        +  ++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS++
Subjt:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
AT5G05360.2 unknown protein5.5e-3166.67Show/hide
Query:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        +  ++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTCAAGGACACTTTGAAGGAAGCCAAAGCTGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCCGTCTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCCAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTCAAGGACACTTTGAAGGAAGCCAAAGCTGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCCGTCTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCCAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA
Protein sequenceShow/hide protein sequence
MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS