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Cucsat.G122 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G122
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionProtein YABBY 4-like
Genome locationctg1:2464435..2469107
RNA-Seq ExpressionCucsat.G122
SyntenyCucsat.G122
Gene Ontology termsGO:0009944 - polarity specification of adaxial/abaxial axis (biological process)
GO:0010154 - fruit development (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:1902183 - regulation of shoot apical meristem development (biological process)
GO:2000024 - regulation of leaf development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19491.1 protein YABBY 4-like [Cucumis melo var. makuwa]6.66e-3883.33Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS
        MSSSS PTTFSQLPPP SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPV+MCGGMLLP  S+   + HS   FS
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS

XP_004150647.1 protein YABBY 4 isoform X2 [Cucumis sativus]3.07e-4288.89Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH
        MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP   S S  H   H
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH

XP_011650422.1 protein YABBY 4 isoform X1 [Cucumis sativus]4.77e-4288.89Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH
        MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP   S S  H   H
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH

XP_038876835.1 protein YABBY 4-like isoform X1 [Benincasa hispida]5.56e-3880Show/hide
Query:  MSSSSHPTTFSQLPPP-PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSI-SWLHSLNHFS
        MSSSS PTTFSQLPPP PSD++CYVHCNICDT+LAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM LP S     + HS   FS
Subjt:  MSSSSHPTTFSQLPPP-PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSI-SWLHSLNHFS

XP_038876836.1 protein YABBY 4-like isoform X2 [Benincasa hispida]5.10e-3880Show/hide
Query:  MSSSSHPTTFSQLPPP-PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSI-SWLHSLNHFS
        MSSSS PTTFSQLPPP PSD++CYVHCNICDT+LAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM LP S     + HS   FS
Subjt:  MSSSSHPTTFSQLPPP-PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSI-SWLHSLNHFS

TrEMBL top hitse value%identityAlignment
A0A0A0L1N8 Uncharacterized protein1.49e-4288.89Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH
        MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP   S S  H   H
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNH

A0A1S4DXY3 protein YABBY 4-like1.45e-3783.33Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS
        MSSSS PTTFSQLPPP SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPV+MCGGMLLP  S+   + HS   FS
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS

A0A5D3D7E7 Protein YABBY 4-like3.23e-3883.33Show/hide
Query:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS
        MSSSS PTTFSQLPPP SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPV+MCGGMLLP  S+   + HS   FS
Subjt:  MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPF-SKSISWLHSLNHFS

A0A6J1KXR1 protein YABBY 4-like isoform X22.08e-3084.29Show/hide
Query:  MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP
        MSS S PTTFSQ PPPP  SD LCYVHCNICDTVLAVSVP  SLFK VTVRCG+CANLLPVNM GGMLLP
Subjt:  MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP

A0A6J1KZK7 protein YABBY 4-like isoform X12.13e-3084.29Show/hide
Query:  MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP
        MSS S PTTFSQ PPPP  SD LCYVHCNICDTVLAVSVP  SLFK VTVRCG+CANLLPVNM GGMLLP
Subjt:  MSSSSHPTTFSQLPPPP--SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP

SwissProt top hitse value%identityAlignment
A2X7Q3 Protein YABBY 41.8e-1662.5Show/hide
Query:  MSSSSHPTTFSQL----PPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP
        MSSSS  +    L     P P++QLCYVHCN CDT+LAV VP +SLFK VTVRCG+CANLL VN+  G+LLP
Subjt:  MSSSSHPTTFSQL----PPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP

Q01JG2 Protein YABBY 58.2e-1760Show/hide
Query:  SSHPTTFS---------QLPPP--PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKS
        SS P TFS         Q PPP    +QLCYVHCN CDT+LAV VP +SLFK VTVRCG+CANLL VN+  G+LLP + S
Subjt:  SSHPTTFS---------QLPPP--PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKS

Q0JBF0 Protein YABBY 58.2e-1760Show/hide
Query:  SSHPTTFS---------QLPPP--PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKS
        SS P TFS         Q PPP    +QLCYVHCN CDT+LAV VP +SLFK VTVRCG+CANLL VN+  G+LLP + S
Subjt:  SSHPTTFS---------QLPPP--PSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKS

Q6H668 Protein YABBY 41.8e-1662.5Show/hide
Query:  MSSSSHPTTFSQL----PPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP
        MSSSS  +    L     P P++QLCYVHCN CDT+LAV VP +SLFK VTVRCG+CANLL VN+  G+LLP
Subjt:  MSSSSHPTTFSQL----PPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLP

Q9XFB1 Axial regulator YABBY 35.0e-1461.11Show/hide
Query:  MSSSSHPTTFSQLPP---PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM-CGGMLLP
        MSSSS P      PP     +DQLCYVHC+ CDTVLAVSVP +SLFK VTVRCG+C+NLL V +    +LLP
Subjt:  MSSSSHPTTFSQLPP---PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM-CGGMLLP

Arabidopsis top hitse value%identityAlignment
AT1G08465.1 Plant-specific transcription factor YABBY family protein8.1e-1263.64Show/hide
Query:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM
        S+++CYVHC+ C T+LAVSVP  SLF  VTVRCG+C NLL +N+
Subjt:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM

AT2G26580.1 plant-specific transcription factor YABBY family protein3.1e-1156.25Show/hide
Query:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM
        ++QLCY+ CN C+ +LAV+VP +SLF  VTVRCG+C NL  VNM   +
Subjt:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM

AT2G26580.2 plant-specific transcription factor YABBY family protein3.1e-1156.25Show/hide
Query:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM
        ++QLCY+ CN C+ +LAV+VP +SLF  VTVRCG+C NL  VNM   +
Subjt:  SDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGM

AT2G45190.1 Plant-specific transcription factor YABBY family protein7.9e-1545.05Show/hide
Query:  MSSSSHPTTFSQLPP--PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNHFSLSQYSQFLGRDLKSK
        MSS S P++    P    PSD LCYV CN C T+LAV+VP TSLFK VTVRCG C NLL VNM    +LP S  +          L  +S F  +D+  +
Subjt:  MSSSSHPTTFSQLPP--PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNHFSLSQYSQFLGRDLKSK

Query:  SKFFDEPNRRN
         +  D P+  N
Subjt:  SKFFDEPNRRN

AT4G00180.1 Plant-specific transcription factor YABBY family protein3.5e-1561.11Show/hide
Query:  MSSSSHPTTFSQLPP---PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM-CGGMLLP
        MSSSS P      PP     +DQLCYVHC+ CDTVLAVSVP +SLFK VTVRCG+C+NLL V +    +LLP
Subjt:  MSSSSHPTTFSQLPP---PPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNM-CGGMLLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTCTTCCCATCCTACTACTTTCTCTCAACTTCCTCCTCCTCCTTCCGACCAGCTTTGCTACGTTCATTGTAACATTTGCGACACGGTTTTAGCGGTGAGTGT
TCCTTCTACTAGTTTGTTCAAAAGGGTTACTGTTCGTTGTGGCTATTGTGCCAATCTTCTGCCAGTAAACATGTGTGGTGGAATGCTTCTCCCCTTCTCCAAGTCAATTT
CATGGCTTCACTCACTCAACCACTTTTCTCTCTCCCAATACTCACAATTTCTTGGAAGAGATCTCAAATCCAAATCCAAATTTTTTGATGAACCAAACAGAAGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTCTTCCCATCCTACTACTTTCTCTCAACTTCCTCCTCCTCCTTCCGACCAGCTTTGCTACGTTCATTGTAACATTTGCGACACGGTTTTAGCGGTGAGTGT
TCCTTCTACTAGTTTGTTCAAAAGGGTTACTGTTCGTTGTGGCTATTGTGCCAATCTTCTGCCAGTAAACATGTGTGGTGGAATGCTTCTCCCCTTCTCCAAGTCAATTT
CATGGCTTCACTCACTCAACCACTTTTCTCTCTCCCAATACTCACAATTTCTTGGAAGAGATCTCAAATCCAAATCCAAATTTTTTGATGAACCAAACAGAAGGAATTGA
Protein sequenceShow/hide protein sequence
MSSSSHPTTFSQLPPPPSDQLCYVHCNICDTVLAVSVPSTSLFKRVTVRCGYCANLLPVNMCGGMLLPFSKSISWLHSLNHFSLSQYSQFLGRDLKSKSKFFDEPNRRN