; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12361 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12361
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionIntegrase catalytic domain-containing protein
Genome locationctg1837:1126166..1130144
RNA-Seq ExpressionCucsat.G12361
SyntenyCucsat.G12361
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2600999.1 hypothetical protein D8674_002004 [Pyrus ussuriensis x Pyrus communis]8.96e-2854.9Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG C+K  S   L +  ++++DW GD +D+ STT F+VFLG N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+LKDL +  T+ P L  DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
        A+
Subjt:  AI

KAB2601856.1 dynamin-related protein 4C-like [Pyrus ussuriensis x Pyrus communis]1.48e-2756.31Show/hide
Query:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN
        TLG CFK  +   L +  +S++DW GD +D+ STT FVVFLG N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+L+DL +  T+ P L  DN 
Subjt:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN

Query:  SAI
        SA+
Subjt:  SAI

KAB2603470.1 hypothetical protein D8674_004475 [Pyrus ussuriensis x Pyrus communis]4.52e-2855.88Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG C+K  S   L L  ++++DW GD +D+ STT F+VFLG+N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+LKDL +  +  P LL DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
        A+
Subjt:  AI

KAB2607928.1 hypothetical protein D8674_011096 [Pyrus ussuriensis x Pyrus communis]1.48e-2756.31Show/hide
Query:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN
        TLG CFK  +   L +  +S++DW GD +D+ STT FVVFLG N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+L+DL +  T+ P L  DN 
Subjt:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN

Query:  SAI
        SA+
Subjt:  SAI

XP_022152156.1 uncharacterized protein LOC111019945 [Momordica charantia]1.09e-3061.76Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG  F++     LQL  FS+SDW GD  D+ STT  V+FLGSN ISWGAKKQTTVSRSSTEAEYRA   T AE+ WLRQ+LKDL +F    P L  DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
         I
Subjt:  AI

TrEMBL top hitse value%identityAlignment
A0A2N9EPG4 Uncharacterized protein5.32e-2860Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI
        + L+ FS++DWVGD +DK ST+  +VFLG N I+W AKKQ TVSRSSTEAEYRA     AE+CWLR ++KDL IF ++PP L  DN SA+
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI

A0A2N9EVF1 Uncharacterized protein2.71e-2957.78Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI
        LQL+ ++++DW GD DD+HST+ ++V+LGSN I+W AKKQ TVSRSSTE+EYRA  I  AE+CW+R +LKDL I+ +  P L  DN SA+
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI

A0A5N5FD07 Uncharacterized protein4.34e-2854.9Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG C+K  S   L +  ++++DW GD +D+ STT F+VFLG N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+LKDL +  T+ P L  DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
        A+
Subjt:  AI

A0A5N5FQ45 Uncharacterized protein2.19e-2855.88Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG C+K  S   L L  ++++DW GD +D+ STT F+VFLG+N ISW +KKQ TVSRSSTEAEYRA   T AE+ WL+Q+LKDL +  +  P LL DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
        A+
Subjt:  AI

A0A6J1DGS4 uncharacterized protein LOC1110199455.26e-3161.76Show/hide
Query:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS
        LG  F++     LQL  FS+SDW GD  D+ STT  V+FLGSN ISWGAKKQTTVSRSSTEAEYRA   T AE+ WLRQ+LKDL +F    P L  DN S
Subjt:  LGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNS

Query:  AI
         I
Subjt:  AI

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.3e-1036.36Show/hide
Query:  FKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVV-FLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI
        FKK      ++  + +SDW G   D+ STT ++      NLI W  K+Q +V+ SSTEAEY A      E  WL+ +L  + I   NP ++  DN   I
Subjt:  FKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVV-FLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI

P0CV72 Secreted RxLR effector protein 1614.4e-0740.62Show/hide
Query:  QLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWL
        +L  +S++DW GD + + ST+ ++  L    +SW +KKQ TV+ SSTE EY A      E  WL
Subjt:  QLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWL

P92519 Uncharacterized mitochondrial protein AtMg008101.1e-1356.25Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICW
        L +  F +SDW G    + STT F  FLG N+ISW AK+Q TVSRSSTE EYRA  +T AE+ W
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.0e-1647.19Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSA
        L L  +S++DW GD+DD  ST  ++V+LG + ISW +KKQ  V RSSTEAEYR+   T +E+ W+  +L +L I  T PP +  DN  A
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSA

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-1546.07Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSA
        L L  +S++DW GD DD  ST  ++V+LG + ISW +KKQ  V RSSTEAEYR+   T +E+ W+  +L +L I  ++PP +  DN  A
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSA

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.1e-1640.78Show/hide
Query:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN
        T+G     +S   +QL  FS++ +   +D + ST  + +FLG++LISW +KKQ  VS+SS EAEYRA      E+ WL Q  ++LQ+  + P  L  DN 
Subjt:  TLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNN

Query:  SAI
        +AI
Subjt:  SAI

ATMG00810.1 DNA/RNA polymerases superfamily protein7.7e-1556.25Show/hide
Query:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICW
        L +  F +SDW G    + STT F  FLG N+ISW AK+Q TVSRSSTE EYRA  +T AE+ W
Subjt:  LQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTTCAACTCTGGGCTCCTGTTTCAAAAAAACATCAATCAAACATCTTCAATTAACTACATTCTCTAATTCTGATTGGGTAGGAGATCGTGATGATAAACACTC
TACTACTGAATTTGTAGTATTTTTAGGCTCCAATCTAATATCTTGGGGAGCTAAGAAACAAACCACAGTGTCACGTAGCTCAACTGAAGCTGAATACAGAGCTTCAGTCA
TTACCGATGCTGAGATCTGCTGGTTAAGACAAGTCCTAAAGGATTTACAAATTTTTGGGACTAACCCACCCCAACTACTCTATGACAACAACTCTGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTTCAACTCTGGGCTCCTGTTTCAAAAAAACATCAATCAAACATCTTCAATTAACTACATTCTCTAATTCTGATTGGGTAGGAGATCGTGATGATAAACACTC
TACTACTGAATTTGTAGTATTTTTAGGCTCCAATCTAATATCTTGGGGAGCTAAGAAACAAACCACAGTGTCACGTAGCTCAACTGAAGCTGAATACAGAGCTTCAGTCA
TTACCGATGCTGAGATCTGCTGGTTAAGACAAGTCCTAAAGGATTTACAAATTTTTGGGACTAACCCACCCCAACTACTCTATGACAACAACTCTGCAATTTAA
Protein sequenceShow/hide protein sequence
MELSTLGSCFKKTSIKHLQLTTFSNSDWVGDRDDKHSTTEFVVFLGSNLISWGAKKQTTVSRSSTEAEYRASVITDAEICWLRQVLKDLQIFGTNPPQLLYDNNSAI