CuGenDBv2

Gene ID	Cucsat.G12447
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	RING-type E3 ubiquitin transferase
Genome location	ctg1837:2461905..2463628
RNA-Seq Expression	Cucsat.G12447
Synteny	Cucsat.G12447
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137792.1 uncharacterized protein LOC101209846 [Cucumis sativus]

7.48e-88

99.26

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISSTEPIKQSPAVAPFPPSNH IKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

XP_008442527.1 PREDICTED: uncharacterized protein LOC103486375 [Cucumis melo]

1.02e-85

96.3

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISSTEPIKQSPA APFPPSNHPI+PSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPI FSRKDLCPEC+GAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS SALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

XP_022935020.1 uncharacterized protein LOC111442008 [Cucurbita moschata]

4.49e-80

88.89

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

XP_023528629.1 uncharacterized protein LOC111791489 [Cucurbita pepo subsp. pepo]

3.24e-79

88.89

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

XP_038905250.1 uncharacterized protein LOC120091333 [Benincasa hispida]

7.45e-79

89.63

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISSTEPIKQ P  APFP SNHPI+PS LSLRQ S  HKRIS VVAAVGDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDN8 Uncharacterized protein

3.62e-88

99.26

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISSTEPIKQSPAVAPFPPSNH IKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

A0A1S3B5E7 uncharacterized protein LOC103486375

4.95e-86

96.3

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISSTEPIKQSPA APFPPSNHPI+PSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPI FSRKDLCPEC+GAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS SALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

A0A6J1F9E5 uncharacterized protein LOC111442008

2.17e-80

88.89

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H+RISTVVAA+GDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

A0A6J1I3R1 uncharacterized protein LOC111470276

6.48e-75

85.19

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLCSFPRISS +PIK  PA APFPPSNHP +PS LSLRQSSRN KR ST+VAA+GDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCP CDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        R+S +ALRANAARKDQ QIVC+RCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

A0A6J1J3Y5 uncharacterized protein LOC111482446

7.28e-79

88.89

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Query:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV
        MASLC+FPRISSTEPIKQ+PA APFPPSN P++PS LSLRQSS  H R STVVAAVGDVS+DGTTYLIAGA+AVALVGTAFPILFSRKDLCPECDGAGFV
Subjt:  MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFV

Query:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK
        RRS +ALRANAARKDQTQIVCARCNGLGKLNQVDK
Subjt:  RRSESALRANAARKDQTQIVCARCNGLGKLNQVDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G02160.1 unknown protein

2.5e-34

66.67

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Query:  ISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRA
        +SST  +K S +    P  N+ I P   + R SS      S VVAAVGDVSSDGT YLI GAIAVALVGTAFPILF RKD CPECDGAGFVR+    LRA
Subjt:  ISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRA

Query:  NAARKDQTQIVCARCNGLGKLNQVDK
        NAARKD  QIVCA CNGLGKLNQ+DK
Subjt:  NAARKDQTQIVCARCNGLGKLNQVDK

Sequences

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CDS sequence

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ATGGCATCTCTGTGTTCATTTCCGCGCATTTCCTCCACAGAACCCATCAAACAATCGCCCGCCGTCGCCCCTTTTCCGCCCTCCAACCACCCAATAAAACCGTCCACCCT
ATCCCTCCGCCAAAGCAGCCGCAATCACAAGAGAATTTCCACAGTGGTCGCCGCCGTTGGAGACGTCTCCTCCGACGGCACCACATACTTGATCGCCGGCGCCATTGCTG
TGGCTCTCGTCGGTACCGCCTTCCCCATCCTCTTCTCTCGCAAAGACCTGTGTCCGGAATGCGACGGTGCAGGGTTTGTCCGGCGATCGGAGTCGGCGCTGAGGGCAAAT
GCGGCTCGCAAAGATCAAACTCAGATCGTTTGTGCTCGTTGTAATGGGCTTGGCAAGCTCAACCAAGTGGACAAATAG

mRNA sequence

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Protein sequence

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MASLCSFPRISSTEPIKQSPAVAPFPPSNHPIKPSTLSLRQSSRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRRSESALRAN
AARKDQTQIVCARCNGLGKLNQVDK

Cucsat.G12447 (gene) of Cucumber (B10) v3 genome