; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12650 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12650
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionribosome production factor 1-like
Genome locationctg1838:1782754..1787021
RNA-Seq ExpressionCucsat.G12650
SyntenyCucsat.G12650
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]2.55e-19597.59Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]6.62e-18291.75Show/hide
Query:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP
          LPK+LITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQ
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]4.66e-18292.1Show/hide
Query:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP
          LPK+LITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SK  KGEKVP+QKVIARLQ
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]2.80e-199100Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]7.73e-19094.48Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEE KN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPK+LITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
         HQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein1.35e-199100Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

A0A1S3B854 ribosome production factor 1 isoform X11.23e-19597.59Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

A0A5A7UHC7 Ribosome production factor 1 isoform X11.23e-19597.59Show/hide
Query:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQ
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

A0A6J1DPH5 ribosome production factor 1-like2.26e-18292.1Show/hide
Query:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP
          LPK+LITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKKEADSK  SK  KGEKVP+QKVIARLQ
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

A0A6J1DT48 ribosome production factor 1-like3.21e-18291.75Show/hide
Query:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  I+PS IKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNKV-IVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP
          LPK+LITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNP
Subjt:  DILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKKEADSK  SK  KGEKVPQQKVIARLQ
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQ

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 13.7e-5547.2Show/hide
Query:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF
        S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PKILITT   
Subjt:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF
                  +L +VIPN+H Y R    LKKI+    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRKEIK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE

Q6IQU6 Ribosome production factor 11.3e-5547.6Show/hide
Query:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PK+LITT   
Subjt:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK++    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRKE+K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF++++
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE

Q7TND5 Ribosome production factor 18.2e-5546.8Show/hide
Query:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF
        S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R   PKILITT   
Subjt:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF
                  +L +VIP++H Y R    LKKI+    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRKEIK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF+S++
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE

Q8AVP1 Ribosome production factor 18.7e-5747.64Show/hide
Query:  STIKNKEKRAEVHANLKHQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    +   PKILIT
Subjt:  STIKNKEKRAEVHANLKHQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELV
        T          F  +L S+IPN+  Y R    LKKI+    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRKE+K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F+S++
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE

Q9H9Y2 Ribosome production factor 18.2e-5546.8Show/hide
Query:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF
        S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PKILITT   
Subjt:  STIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF
                  +L +VIPN+H Y R    LKKI+    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRKEIK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHG-NPTGHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE
        TTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S++
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKE

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein1.0e-2836.49Show/hide
Query:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEY
        ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + D  PKIL+TT R  S     F  EL  V PN+    RG+  + +I+E 
Subjt:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEY

Query:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEI---KNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R +I   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ
Subjt:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEI---KNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ

Query:  RDFIFFRHHRY
         D+I FR+H Y
Subjt:  RDFIFFRHHRY

AT4G01560.1 Ribosomal RNA processing Brix domain protein8.8e-11375Show/hide
Query:  GEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI
        G EK+N VI+PS IKNK+KR++V+A  KH+KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R+I
Subjt:  GEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI

Query:  LPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPTG
         PK+L+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKIVEYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRK+IKNHGNPT 
Subjt:  LPKILITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPTG

Query:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK
        HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIFE+KE+K +   ++  K
Subjt:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGGAGAAGAAGAACAAGGTTATAGTCCCATCAACGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGCATCAGAAGAAGCTAGAGAAACG
CAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGAAAGATTCCTCGCACCATTGAGAACACTAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGACGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCTATCATAAAGCGCGACATTTTGCCAAAAATTCTAATTACTACTTGT
CGTTTTAATTCTACGATTGGTCCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGGACTAACGATTTGAAGAAGATTGTAGAATA
TGCAAATGCCAAAGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGACTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TTTCAAATGTCGTCTTACGTAAGGAAATTAAGAATCATGGAAATCCAACGGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAATCATTATTCCCTCAAGATCCCAATTTTCGCGGTCGGCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACAGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCTGACTCAAAAAAGAAGTCCAAGGGTACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGTCGATATTA
ACCTACTACTCATAAAACGTTGTTTTATGATATCTATAGTGGTTTATTTTGCAACTTGGAGACTTCAATATTGTTTACTTGTTTTCATCTTGTCTCTCTTTCTGCAACTC
AGTTTTTTTTCTTCCTCTAATTTTTTTGGGGGTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGGAGAAGAAGAACAAGGTTATAGTCCCATCAACGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGCATCAGAAGAAGCTAGAGAAACG
CAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGAAAGATTCCTCGCACCATTGAGAACACTAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGACGAAGAGCTATTTGCTGGAAATGATGCCGATGAATTTAGTTCTATCATAAAGCGCGACATTTTGCCAAAAATTCTAATTACTACTTGT
CGTTTTAATTCTACGATTGGTCCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGGACTAACGATTTGAAGAAGATTGTAGAATA
TGCAAATGCCAAAGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGACTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TTTCAAATGTCGTCTTACGTAAGGAAATTAAGAATCATGGAAATCCAACGGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGA
AGATTAATACAATCATTATTCCCTCAAGATCCCAATTTTCGCGGTCGGCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACAGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGAGGCTGACTCAAAAAAGAAGTCCAAGGGTACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGTCGATATTA
ACCTACTACTCATAAAACGTTGTTTTATGATATCTATAGTGGTTTATTTTGCAACTTGGAGACTTCAATATTGTTTACTTGTTTTCATCTTGTCTCTCTTTCTGCAACTC
AGTTTTTTTTCTTCCTCTAATTTTTTTGGGGGTGATGATTAA
Protein sequenceShow/hide protein sequence
MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQVDINLLLIKRCFMISIVVYFATWRLQYCLLVFILSLFLQL
SFFSSSNFFGGDD