; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12750 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12750
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRNase H domain-containing protein
Genome locationctg1838:3550658..3555987
RNA-Seq ExpressionCucsat.G12750
SyntenyCucsat.G12750
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17758.1 RNase H domain-containing family protein [Cucumis melo var. makuwa]4.59e-13783.27Show/hide
Query:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI
        DP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY KAERQERVL+NTEY                    
Subjt:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI

Query:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA
           TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIKHI VQGDSKLVCMQVQGLWKLKN NMA+ CKVA
Subjt:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA

Query:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        KELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

XP_004147444.1 uncharacterized protein LOC101219107 [Cucumis sativus]2.86e-17891.73Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
        MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK

Query:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
        AERQERVLENTEY                       TYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
Subjt:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK

Query:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
Subjt:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

XP_008443477.1 PREDICTED: uncharacterized protein LOC103487060 isoform X1 [Cucumis melo]5.36e-16083.45Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
        MEGDKDAYYVV KGDVFGFYR+AKEL+T  GRFDP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY K
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK

Query:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
        AERQERVL+NTEY                       TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIK
Subjt:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK

Query:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        HI VQGDSKLVCMQVQGLWKLKN NMA+ CKVAKELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

XP_008443478.1 PREDICTED: uncharacterized protein Mb2253c isoform X2 [Cucumis melo]7.99e-13883.27Show/hide
Query:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI
        DP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY KAERQERVL+NTEY                    
Subjt:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI

Query:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA
           TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIKHI VQGDSKLVCMQVQGLWKLKN NMA+ CKVA
Subjt:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA

Query:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        KELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

XP_022928161.1 uncharacterized protein LOC111435064 [Cucurbita moschata]7.81e-13773.01Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY
        MEGDKDAYYVV KGDVFGFYR+ KEL    G   FDP+ATIYKGYHLSKE+E+YL +HGL+SATYSISAANVT DLFGK+L C PYEQPS+TRG+MAEEY
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY

Query:  SKAERQERVLENTE--YKGQRCPQDSCGCCLLSSDLIGK-------RTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVIL
         KA+RQ R +ENTE  + G            ++ D + +       R YFLEFDGASKGNPGLAGAGAVLRANDG+T+C+LQEGVGIAT NVAEYRAVIL
Subjt:  SKAERQERVLENTE--YKGQRCPQDSCGCCLLSSDLIGK-------RTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVIL

Query:  GLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        GLKHALK+G KHI V+GDSKLVCMQVQGLWKLKN NMA  CKVAK+LKDKFVSFEI+H PR+QNSDADALAN AI L+DG+VVEDC HK
Subjt:  GLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

TrEMBL top hitse value%identityAlignment
A0A0A0LHV8 RNase H domain-containing protein1.38e-17891.73Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
        MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK

Query:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
        AERQERVLENTEY                       TYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
Subjt:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK

Query:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
Subjt:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

A0A1S3B7N6 uncharacterized protein LOC103487060 isoform X12.59e-16083.45Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK
        MEGDKDAYYVV KGDVFGFYR+AKEL+T  GRFDP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY K
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSK

Query:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK
        AERQERVL+NTEY                       TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIK
Subjt:  AERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIK

Query:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        HI VQGDSKLVCMQVQGLWKLKN NMA+ CKVAKELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  HIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

A0A1S3B845 uncharacterized protein Mb2253c isoform X23.87e-13883.27Show/hide
Query:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI
        DP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY KAERQERVL+NTEY                    
Subjt:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI

Query:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA
           TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIKHI VQGDSKLVCMQVQGLWKLKN NMA+ CKVA
Subjt:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA

Query:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        KELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

A0A5D3D2K9 RNase H domain-containing family protein2.22e-13783.27Show/hide
Query:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI
        DP+ATIYKGYHLSKEAEEYLV+HGLQSATYSISAANVTKDLFGKILPCFPYEQPS TRGKMAEEY KAERQERVL+NTEY                    
Subjt:  DPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLI

Query:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA
           TYFLEFDGASKGNPGLAGAGA+LRANDGSTVC+LQEGVGIATCNVAEYRA+ILGLKHALKNGIKHI VQGDSKLVCMQVQGLWKLKN NMA+ CKVA
Subjt:  GKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVA

Query:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        KELKDKFVSFEISH PR +NSDADALAN AI LQDGVVVEDC+HK
Subjt:  KELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

A0A6J1EJI9 uncharacterized protein LOC1114350643.78e-13773.01Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY
        MEGDKDAYYVV KGDVFGFYR+ KEL    G   FDP+ATIYKGYHLSKE+E+YL +HGL+SATYSISAANVT DLFGK+L C PYEQPS+TRG+MAEEY
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY

Query:  SKAERQERVLENTE--YKGQRCPQDSCGCCLLSSDLIGK-------RTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVIL
         KA+RQ R +ENTE  + G            ++ D + +       R YFLEFDGASKGNPGLAGAGAVLRANDG+T+C+LQEGVGIAT NVAEYRAVIL
Subjt:  SKAERQERVLENTE--YKGQRCPQDSCGCCLLSSDLIGK-------RTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVIL

Query:  GLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK
        GLKHALK+G KHI V+GDSKLVCMQVQGLWKLKN NMA  CKVAK+LKDKFVSFEI+H PR+QNSDADALAN AI L+DG+VVEDC HK
Subjt:  GLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVVVEDCMHK

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI7.0e-0632.59Show/hide
Query:  FDG--ASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIA--------TCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCK
        FDG    K   G+A  G V+  ++     +  EG G+A        T NVAEY  +I  ++  L+ GI    ++GDS+LV  Q+ G +K+K   +    +
Subjt:  FDG--ASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIA--------TCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCK

Query:  VAKELKDKFVSFEISHFPRKQNSDADALANCAIRL
         A ELK K ++  +   PR++N +AD L+  A  L
Subjt:  VAKELKDKFVSFEISHFPRKQNSDADALANCAIRL

P64956 Uncharacterized protein Mb2253c4.2e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD
        +E DG S+GNPG AG GAV+   D STV  + ++ +G AT NVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+P++ K    A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD

Query:  KFVSFEISHFPRKQNSDADALANCAI
        +F        PR +N+ AD LAN A+
Subjt:  KFVSFEISHFPRKQNSDADALANCAI

P9WLH4 Uncharacterized protein MT22874.2e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD
        +E DG S+GNPG AG GAV+   D STV  + ++ +G AT NVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+P++ K    A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD

Query:  KFVSFEISHFPRKQNSDADALANCAI
        +F        PR +N+ AD LAN A+
Subjt:  KFVSFEISHFPRKQNSDADALANCAI

P9WLH5 Bifunctional protein Rv2228c4.2e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD
        +E DG S+GNPG AG GAV+   D STV  + ++ +G AT NVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+P++ K    A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVLRANDGSTV-CKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKD

Query:  KFVSFEISHFPRKQNSDADALANCAI
        +F        PR +N+ AD LAN A+
Subjt:  KFVSFEISHFPRKQNSDADALANCAI

Q9HSF6 Ribonuclease HI4.7e-1843.9Show/hide
Query:  FDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFV
        FDGAS+GNPG A  G VL + DG  V +  + +G AT N AEY A+I  L+ A   G   I ++GDS+LV  Q+ G W   +P++ +    A+EL   F 
Subjt:  FDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFV

Query:  SFEISHFPRKQNSDADALANCAI
         + I+H PR  N  ADALAN A+
Subjt:  SFEISHFPRKQNSDADALANCAI

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein4.6e-6144.64Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY
        ++ +KDA++VV KGDV G Y+   +     G   FD   ++YKGY L K+ EEYL + GL+   YS+ A+++  D+FG + PC  +++P+    K++E+ 
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY

Query:  SKAERQERVLENTEYKGQRCPQDSCGCCLLS-------SDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGL
        + +E + +     + K  + P  S     L        S  I   T F+EFDGASKGNPGL+GA AVL+  DGS +C++++G+GIAT N AEY A+ILGL
Subjt:  SKAERQERVLENTEYKGQRCPQDSCGCCLLS-------SDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGL

Query:  KHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV
        K+A++ G K+I+V+GDSKLVCMQ++G WK+ +  +AK  K AK L +K VSFEISH  R  N+DAD  AN A+RL +G V
Subjt:  KHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.5e-6145.26Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY
        ME +KDA+Y+V KGD+ G YR+  E     G     P  ++YKGY   K AE+ L + G+++A +S++A++V  D FGK++PC P +QPS+++G+   + 
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY

Query:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGK-------RTYF-------LEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEY
        S ++R + +   +   G   P        + +D++ +       RT         +EFDGASKGNPG AGAGAVLRA+D S +  L+EGVG AT NVAEY
Subjt:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGK-------RTYF-------LEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEY

Query:  RAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDG
        RA++LGL+ AL  G K++ V GDS LVCMQVQG WK  +P MA+ CK AKEL + F +F+I H  R++NS+AD  AN AI L DG
Subjt:  RAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDG

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.5e-6145.26Show/hide
Query:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY
        ME +KDA+Y+V KGD+ G YR+  E     G     P  ++YKGY   K AE+ L + G+++A +S++A++V  D FGK++PC P +QPS+++G+   + 
Subjt:  MEGDKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEY

Query:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGK-------RTYF-------LEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEY
        S ++R + +   +   G   P        + +D++ +       RT         +EFDGASKGNPG AGAGAVLRA+D S +  L+EGVG AT NVAEY
Subjt:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGK-------RTYF-------LEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEY

Query:  RAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDG
        RA++LGL+ AL  G K++ V GDS LVCMQVQG WK  +P MA+ CK AKEL + F +F+I H  R++NS+AD  AN AI L DG
Subjt:  RAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDG

AT5G51080.1 RNase H family protein7.1e-5443.59Show/hide
Query:  DKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPC-FPYEQPSATRG--KMAEEY
        +KDA++VV KGD+ G Y+   +     G   +DP  ++YKGY L K+ EE L   GL+   Y   A ++ +D+FG + PC F  + PSA+    K+AE  
Subjt:  DKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPC-FPYEQPSATRG--KMAEEY

Query:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNG
          A+        T Y+                      T  +EFDGASKGNPGL+GA AVL+  DGS + K+++G+GIAT N AEY  +ILGLKHA++ G
Subjt:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNG

Query:  IKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV
           I+V+ DSKLVCMQ++G WK+ +  ++K  K AK+L DK +SFEISH  R  NSDAD  AN A RL +G V
Subjt:  IKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV

AT5G51080.2 RNase H family protein7.1e-5443.59Show/hide
Query:  DKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPC-FPYEQPSATRG--KMAEEY
        +KDA++VV KGD+ G Y+   +     G   +DP  ++YKGY L K+ EE L   GL+   Y   A ++ +D+FG + PC F  + PSA+    K+AE  
Subjt:  DKDAYYVVHKGDVFGFYRTAKELLTHPGR--FDPDATIYKGYHLSKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPC-FPYEQPSATRG--KMAEEY

Query:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNG
          A+        T Y+                      T  +EFDGASKGNPGL+GA AVL+  DGS + K+++G+GIAT N AEY  +ILGLKHA++ G
Subjt:  SKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGAGAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNG

Query:  IKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV
           I+V+ DSKLVCMQ++G WK+ +  ++K  K AK+L DK +SFEISH  R  NSDAD  AN A RL +G V
Subjt:  IKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIRLQDGVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTTTCGCGGGTCAGCACACAATTTCTCCGCTATTACCGCTCATTCCACTTCTTCACACTACGCTAACTTTTTCCTTTCTCTCTATTATTCGCTTGGGTTCTATCATCT
TCTACTTCTACGCCACGATCAGATTGACTTCTTTTCTTCTTCTTTCTCTTTTCTGACATTTGAATGTGGGTATTACTTATTGAAGATGGAGGGAGATAAAGATGCATATT
ACGTTGTACACAAAGGGGATGTTTTTGGATTTTATAGGACTGCTAAGGAGTTGCTGACTCATCCTGGACGTTTTGATCCCGATGCAACGATCTACAAAGGGTATCACTTA
TCTAAAGAAGCAGAAGAATATCTTGTAGCGCACGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACCAAGGATCTATTTGGAAAAATACTTCCTTGTTT
CCCTTATGAGCAACCATCTGCTACTAGAGGAAAAATGGCTGAAGAATACTCCAAAGCTGAGAGACAAGAACGAGTCCTTGAGAATACTGAATATAAAGGTCAAAGGTGTC
CCCAGGATTCATGTGGCTGTTGTTTGCTGTCTTCAGATTTGATTGGGAAAAGGACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCT
GGAGCTGTTTTACGTGCTAACGATGGATCTACGGTCTGTAAGTTGCAAGAAGGGGTTGGGATTGCTACATGTAATGTTGCTGAATATCGTGCTGTAATTTTAGGACTGAA
ACATGCTCTAAAGAATGGCATTAAACACATTCGTGTCCAAGGAGACTCTAAGCTTGTTTGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCCAAATATGGCTAAAT
TTTGTAAAGTGGCTAAGGAGCTCAAGGATAAGTTTGTGTCATTTGAGATCAGCCATTTCCCTAGGAAACAAAATTCTGATGCCGATGCTCTAGCGAACTGCGCTATACGT
CTACAAGATGGAGTCGTAGTAGAAGACTGCATGCATAAATGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTCGCGGGTCAGCACACAATTTCTCCGCTATTACCGCTCATTCCACTTCTTCACACTACGCTAACTTTTTCCTTTCTCTCTATTATTCGCTTGGGTTCTATCATCT
TCTACTTCTACGCCACGATCAGATTGACTTCTTTTCTTCTTCTTTCTCTTTTCTGACATTTGAATGTGGGTATTACTTATTGAAGATGGAGGGAGATAAAGATGCATATT
ACGTTGTACACAAAGGGGATGTTTTTGGATTTTATAGGACTGCTAAGGAGTTGCTGACTCATCCTGGACGTTTTGATCCCGATGCAACGATCTACAAAGGGTATCACTTA
TCTAAAGAAGCAGAAGAATATCTTGTAGCGCACGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACCAAGGATCTATTTGGAAAAATACTTCCTTGTTT
CCCTTATGAGCAACCATCTGCTACTAGAGGAAAAATGGCTGAAGAATACTCCAAAGCTGAGAGACAAGAACGAGTCCTTGAGAATACTGAATATAAAGGTCAAAGGTGTC
CCCAGGATTCATGTGGCTGTTGTTTGCTGTCTTCAGATTTGATTGGGAAAAGGACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCT
GGAGCTGTTTTACGTGCTAACGATGGATCTACGGTCTGTAAGTTGCAAGAAGGGGTTGGGATTGCTACATGTAATGTTGCTGAATATCGTGCTGTAATTTTAGGACTGAA
ACATGCTCTAAAGAATGGCATTAAACACATTCGTGTCCAAGGAGACTCTAAGCTTGTTTGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCCAAATATGGCTAAAT
TTTGTAAAGTGGCTAAGGAGCTCAAGGATAAGTTTGTGTCATTTGAGATCAGCCATTTCCCTAGGAAACAAAATTCTGATGCCGATGCTCTAGCGAACTGCGCTATACGT
CTACAAGATGGAGTCGTAGTAGAAGACTGCATGCATAAATGA
Protein sequenceShow/hide protein sequence
LFRGSAHNFSAITAHSTSSHYANFFLSLYYSLGFYHLLLLRHDQIDFFSSSFSFLTFECGYYLLKMEGDKDAYYVVHKGDVFGFYRTAKELLTHPGRFDPDATIYKGYHL
SKEAEEYLVAHGLQSATYSISAANVTKDLFGKILPCFPYEQPSATRGKMAEEYSKAERQERVLENTEYKGQRCPQDSCGCCLLSSDLIGKRTYFLEFDGASKGNPGLAGA
GAVLRANDGSTVCKLQEGVGIATCNVAEYRAVILGLKHALKNGIKHIRVQGDSKLVCMQVQGLWKLKNPNMAKFCKVAKELKDKFVSFEISHFPRKQNSDADALANCAIR
LQDGVVVEDCMHK