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Cucsat.G12760 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12760
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionF-box domain-containing protein
Genome locationctg1838:3740318..3741676
RNA-Seq ExpressionCucsat.G12760
SyntenyCucsat.G12760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59658.1 hypothetical protein Csa_001357 [Cucumis sativus]1.12e-71100Show/hide
Query:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI
        MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI
Subjt:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI

Query:  DSLNFDSLAKTLGVN
        DSLNFDSLAKTLGVN
Subjt:  DSLNFDSLAKTLGVN

KGN59660.1 hypothetical protein Csa_001105 [Cucumis sativus]2.99e-3660.94Show/hide
Query:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN
        +G FHVWK+MEE YSW KLEQ+F I + I +H+S + ++ YIR        D+   C   HFQLIKVFEDE MLFLIS++ALILYDSK +QFE  +++LN
Subjt:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN

Query:  QDQDGKLCIHEID-SLNFDSLAKTLGVN
        QDQDGKL I++ID SLN DSL KTLGVN
Subjt:  QDQDGKLCIHEID-SLNFDSLAKTLGVN

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]3.83e-0536.36Show/hide
Query:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS
         +HVWKM +ED+SW K E   A+ ++I       + S  R + I  + QL+K  ED ++L L +   LI+YD K  Q E + D+  + ++G +  H+I+S
Subjt:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS

Query:  LNFDSLAKTL
         +F+SL  TL
Subjt:  LNFDSLAKTL

XP_011652871.1 F-box/kelch-repeat protein At3g06240 [Cucumis sativus]3.01e-3760.94Show/hide
Query:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN
        +G FHVWK+MEE YSW KLEQ+F I + I +H+S + ++ YIR        D+   C   HFQLIKVFEDE MLFLIS++ALILYDSK +QFE  +++LN
Subjt:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN

Query:  QDQDGKLCIHEID-SLNFDSLAKTLGVN
        QDQDGKL I++ID SLN DSL KTLGVN
Subjt:  QDQDGKLCIHEID-SLNFDSLAKTLGVN

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]5.21e-0537.84Show/hide
Query:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAV-HDELNQDQDGKLCIHEID
        ++HVWKM EED+SW K      ++  I  H   +  S +         QLI+  +D  +L LIS   LILY+SK  + E++ +  LN  +     +H ID
Subjt:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAV-HDELNQDQDGKLCIHEID

Query:  SLNFDSLAKTL
        S NFDSL K L
Subjt:  SLNFDSLAKTL

TrEMBL top hitse value%identityAlignment
A0A0A0LCB8 F-box domain-containing protein1.45e-3660.94Show/hide
Query:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN
        +G FHVWK+MEE YSW KLEQ+F I + I +H+S + ++ YIR        D+   C   HFQLIKVFEDE MLFLIS++ALILYDSK +QFE  +++LN
Subjt:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLM-MVSYIR--------DYMIRC---HFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELN

Query:  QDQDGKLCIHEID-SLNFDSLAKTLGVN
        QDQDGKL I++ID SLN DSL KTLGVN
Subjt:  QDQDGKLCIHEID-SLNFDSLAKTLGVN

A0A0A0LCZ3 F-box domain-containing protein5.41e-72100Show/hide
Query:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI
        MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI
Subjt:  MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEI

Query:  DSLNFDSLAKTLGVN
        DSLNFDSLAKTLGVN
Subjt:  DSLNFDSLAKTLGVN

A0A1S3BQV8 putative F-box protein At3g211201.85e-0536.36Show/hide
Query:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS
         +HVWKM +ED+SW K E   A+ ++I       + S  R + I  + QL+K  ED ++L L +   LI+YD K  Q E + D+  + ++G +  H+I+S
Subjt:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS

Query:  LNFDSLAKTL
         +F+SL  TL
Subjt:  LNFDSLAKTL

A0A5D3CIX9 Putative F-box protein1.85e-0536.36Show/hide
Query:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS
         +HVWKM +ED+SW K E   A+ ++I       + S  R + I  + QL+K  ED ++L L +   LI+YD K  Q E + D+  + ++G +  H+I+S
Subjt:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDS

Query:  LNFDSLAKTL
         +F+SL  TL
Subjt:  LNFDSLAKTL

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like2.52e-0537.84Show/hide
Query:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAV-HDELNQDQDGKLCIHEID
        ++HVWKM EED+SW K      ++  I  H   +  S +         QLI+  +D  +L LIS   LILY+SK  + E++ +  LN  +     +H ID
Subjt:  SFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAV-HDELNQDQDGKLCIHEID

Query:  SLNFDSLAKTL
        S NFDSL K L
Subjt:  SLNFDSLAKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGCTTTCATGTGTGGAAGATGATGGAAGAAGATTATTCATGGGTTAAATTAGAACAAAAATTTGCTATTATGAAATCCATCAAAGACCATTTCTCATTGATGAT
GGTTTCTTATATAAGAGATTACATGATTAGATGTCATTTCCAACTCATCAAAGTTTTTGAAGATGAAACGATGTTGTTTCTTATTTCTCAAAGGGCTTTAATTTTGTATG
ACTCCAAGATCGACCAGTTTGAGGCCGTGCATGATGAACTGAATCAAGATCAGGATGGAAAATTATGTATTCATGAAATTGATTCATTAAATTTTGATTCTCTCGCAAAG
ACTCTGGGAGTAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGCTTTCATGTGTGGAAGATGATGGAAGAAGATTATTCATGGGTTAAATTAGAACAAAAATTTGCTATTATGAAATCCATCAAAGACCATTTCTCATTGATGAT
GGTTTCTTATATAAGAGATTACATGATTAGATGTCATTTCCAACTCATCAAAGTTTTTGAAGATGAAACGATGTTGTTTCTTATTTCTCAAAGGGCTTTAATTTTGTATG
ACTCCAAGATCGACCAGTTTGAGGCCGTGCATGATGAACTGAATCAAGATCAGGATGGAAAATTATGTATTCATGAAATTGATTCATTAAATTTTGATTCTCTCGCAAAG
ACTCTGGGAGTAAATTGA
Protein sequenceShow/hide protein sequence
MGSFHVWKMMEEDYSWVKLEQKFAIMKSIKDHFSLMMVSYIRDYMIRCHFQLIKVFEDETMLFLISQRALILYDSKIDQFEAVHDELNQDQDGKLCIHEIDSLNFDSLAK
TLGVN