; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12788 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12788
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionWD repeat-containing protein 55
Genome locationctg1838:4386203..4392965
RNA-Seq ExpressionCucsat.G12788
SyntenyCucsat.G12788
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0009855 - determination of bilateral symmetry (biological process)
GO:0009960 - endosperm development (biological process)
GO:0010197 - polar nucleus fusion (biological process)
GO:0080186 - developmental vegetative growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141133.1 WD repeat-containing protein 55 [Cucumis sativus]3.94e-229100Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASASVNSFTFTDD
        APTTTVEASASVNSFTFTDD
Subjt:  APTTTVEASASVNSFTFTDD

XP_008464963.1 PREDICTED: WD repeat-containing protein 55 [Cucumis melo]2.87e-22498.44Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAH KSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTY SDSTKLLATSGDGSLSVWNLRRNK+HARSEFSEEELLSVVTMKNGRKVICGSQNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASASVNSFTFTDD
        APTT VEASASVNSFTFT+D
Subjt:  APTTTVEASASVNSFTFTDD

XP_022151710.1 WD repeat-containing protein 55 [Momordica charantia]2.66e-19385.05Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY+ANALPQ+L KVRAH++SCRAVRFINDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        IN+TSETIASGDDNG IKVWDTRQRSCC++F+AHEDYISDMT+ SDS KLLATSGDG+LSV NLRRNK+HARSEFSE ELLSVV MKNGRKVICGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APT--TTVEASASVNSFTFTD
        +    TTV+A  S N FTF D
Subjt:  APT--TTVEASASVNSFTFTD

XP_022960342.1 WD repeat-containing protein 55 [Cucurbita moschata]2.14e-18882.66Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQ+L KVRAH++SCRAVRFINDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        +N+TSETIASGDDNG IKVWDTRQRSCC+SF+AHEDYISDMTY SDS KLLATSGDG+LSV NLRRNK+HARSEFSE ELLSVV MKNGRKVICGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--
        LLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASESGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYM+KLWDMDLLQSS  
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--

Query:  -GNAPTTTVE-ASASVNSFTFTD
          N P      ASAS N F F D
Subjt:  -GNAPTTTVE-ASASVNSFTFTD

XP_038905147.1 WD repeat-containing protein 55 [Benincasa hispida]3.63e-20792.21Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAH +SCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        INIT ETIASGDDNG IKVWDTRQRSCCSSFKAH+DYISDMTY SDS KLLATSGDGSLSV NLRRNK+HARSEFSE ELLSVV MKNGRKVICGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWG FQDCSDRFVDASQNPVNALLKLDEDRVI ASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APT--TTVEASASVNSFTFTD
        A     TV+A AS N FTFTD
Subjt:  APT--TTVEASASVNSFTFTD

TrEMBL top hitse value%identityAlignment
A0A1S3CPA6 WD repeat-containing protein 551.39e-22498.44Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAH KSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTY SDSTKLLATSGDGSLSVWNLRRNK+HARSEFSEEELLSVVTMKNGRKVICGSQNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASASVNSFTFTDD
        APTT VEASASVNSFTFT+D
Subjt:  APTTTVEASASVNSFTFTDD

A0A5A7UUH0 WD repeat-containing protein 551.39e-22498.44Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAH KSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTY SDSTKLLATSGDGSLSVWNLRRNK+HARSEFSEEELLSVVTMKNGRKVICGSQNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASASVNSFTFTDD
        APTT VEASASVNSFTFT+D
Subjt:  APTTTVEASASVNSFTFTDD

A0A6J1DBY5 WD repeat-containing protein 551.29e-19385.05Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY+ANALPQ+L KVRAH++SCRAVRFINDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        IN+TSETIASGDDNG IKVWDTRQRSCC++F+AHEDYISDMT+ SDS KLLATSGDG+LSV NLRRNK+HARSEFSE ELLSVV MKNGRKVICGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APT--TTVEASASVNSFTFTD
        +    TTV+A  S N FTF D
Subjt:  APT--TTVEASASVNSFTFTD

A0A6J1H752 WD repeat-containing protein 551.04e-18882.66Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQ+L KVRAH++SCRAVRFINDGRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        +N+TSETIASGDDNG IKVWDTRQRSCC+SF+AHEDYISDMTY SDS KLLATSGDG+LSV NLRRNK+HARSEFSE ELLSVV MKNGRKVICGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--
        LLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASESGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYM+KLWDMDLLQSS  
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--

Query:  -GNAPTTTVE-ASASVNSFTFTD
          N P      ASAS N F F D
Subjt:  -GNAPTTTVE-ASASVNSFTFTD

A0A6J1KPY0 WD repeat-containing protein 555.98e-18882.35Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        ME+NL  IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQ+L KVRAH++SCRAVRFIN GRAILTGS DHSIL+TDVETGSVIARLEDAHD+AV++L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        +N+TSETIASGDDNG IKVWDTRQRSCC+SF+AHEDYISDMTY SDS KLLATSGDG+LSV NLRRNK+HARSEFSE ELLSVV MKNGRKV+CGSQ GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--
        LLLYSWG F+DCSDRFVD SQNPVNALLKLDEDRV+ ASESGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+KFLGSISHDYM+KLWDMDLLQSS  
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS--

Query:  -GNAPTTTVE-ASASVNSFTFTD
          N P      ASAS N F F D
Subjt:  -GNAPTTTVE-ASASVNSFTFTD

SwissProt top hitse value%identityAlignment
B2ZZS9 WD repeat-containing protein 551.1e-5336.24Show/hide
Query:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYD-ANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        +I L  I   +  HPS  ++  G + G+++ Y Y       ++L+    H KSCR VRF  DG  + + S D ++   DVE G +++R+  AH  A++ L
Subjt:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYD-ANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        + +    +A+GDD G +KVWD R+       K H+DYISD+        LL TSGDG++ V+N++R +    SEF   +L SV  MK G+KV+CGS  GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS
        + +++W  F   SDRF   +++ V+ ++ + +  +  AS  G I  + +LPNRVI  I +H   P+E +  S D +FL S +HD +IK W++  LQ +
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSS

O80775 WD repeat-containing protein 556.1e-11364.19Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEI+L    F +DFHPS  LVAAG+I G+LHLYRYD+++   +  KVRAH +SCRAVRFI+DG+ I+T S+D SIL+TDVETG+ +A LE+AH++AV+ L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        IN+T  TIASGDD G +K+WDTRQRSC   F AHEDYIS MT+ SDS KL+ TSGDG+LSV NLR +K+ ++SEFSE+ELLSVV MKNGRKVICG+QNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFF+DCSDRFVD + N V+ALLKLDEDR+I   ++G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+KLW+++ +    N
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASA
          +     +A
Subjt:  APTTTVEASA

Q54SA5 WD repeat-containing protein 55 homolog1.8e-5636.36Show/hide
Query:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLI
        +I+   IPF L+FHP++ L+      G L L++Y  +    KL  +R H   CR   F +DG+ I T SSD S+   D+ TGS++   E+AHD  ++ L+
Subjt:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLI

Query:  NITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTL
        +     + +GDD G IKVWD RQ++    F+ H D+ISD+T + D   + ATSGDG +S++N  R  +   SE S+ ELLS +++ NG+K++CGSQ+G++
Subjt:  NITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTL

Query:  LLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGNA
        L+Y     ++   +F    Q+ V+AL+K++ +     S  G+I  +G+ P +++  + EHS +P+ER+A S D ++LGSISHD+ +K W++        +
Subjt:  LLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGNA

Query:  PTTTVEASASVNSFTFTDD
              A+A+ N     DD
Subjt:  PTTTVEASASVNSFTFTDD

Q58DT8 WD repeat-containing protein 555.0e-5438.68Show/hide
Query:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIAS
        L FHP+  L+AAG + G++ ++ Y       ++L+    H KSCRAV F  DG+ ++T S D +I   DVE G +  R+  AH   ++ L+ +    +A+
Subjt:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIAS

Query:  GDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQ
        GDD G I++WD R+       + HE+YI+DM    D   LL  SGDG L V+N++R +    SE    +L SV  MK GRKV CGS  GT+ L++W  F 
Subjt:  GDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQ

Query:  DCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQS
          SDRF   +++ ++ ++ + E  +   S  G+I  V ILPNRV+  + +H++ PVE LA SH   FL S  HD  +K WDM  L++
Subjt:  DCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQS

Q6DRF9 WD repeat-containing protein 556.5e-5437.97Show/hide
Query:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQK-LFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        +I L  I   + FHP   ++AAG I G+++L+ Y       K L+    H KSCR V F +DG+ + + S D +I   DVE G +  R+  AH   ++ +
Subjt:  EINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQK-LFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        + I     A+GDD G +KVWD R+ +     K HEDYISD+T       LL +SGDG+L V+N++R +    SE    +L SV  MK GRKV+CGS  GT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLL
        + +++W  F   SDRF   +++ V+ ++ + +  +  AS  G+I  + ILPNRV+  I +H    +E +A   D  FL S +HD +IK WD+  L
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLL

Arabidopsis top hitse value%identityAlignment
AT2G34260.1 transducin family protein / WD-40 repeat family protein4.4e-11464.19Show/hide
Query:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL
        MEI+L    F +DFHPS  LVAAG+I G+LHLYRYD+++   +  KVRAH +SCRAVRFI+DG+ I+T S+D SIL+TDVETG+ +A LE+AH++AV+ L
Subjt:  MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL

Query:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT
        IN+T  TIASGDD G +K+WDTRQRSC   F AHEDYIS MT+ SDS KL+ TSGDG+LSV NLR +K+ ++SEFSE+ELLSVV MKNGRKVICG+QNGT
Subjt:  INITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGT

Query:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN
        LLLYSWGFF+DCSDRFVD + N V+ALLKLDEDR+I   ++G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+KLW+++ +    N
Subjt:  LLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGN

Query:  APTTTVEASA
          +     +A
Subjt:  APTTTVEASA

AT2G34260.2 transducin family protein / WD-40 repeat family protein6.8e-9165.31Show/hide
Query:  ILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLR
        I+T S+D SIL+TDVETG+ +A LE+AH++AV+ LIN+T  TIASGDD G +K+WDTRQRSC   F AHEDYIS MT+ SDS KL+ TSGDG+LSV NLR
Subjt:  ILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASGDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLR

Query:  RNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYP
         +K+ ++SEFSE+ELLSVV MKNGRKVICG+QNGTLLLYSWGFF+DCSDRFVD + N V+ALLKLDEDR+I   ++G+ISLVGILPNR+IQPI  H DYP
Subjt:  RNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYP

Query:  VERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGNAPTTTVEASA
        +E LA SHD+KFLGS +HD M+KLW+++ +    N  +     +A
Subjt:  VERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGNAPTTTVEASA

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein5.1e-1421.99Show/hide
Query:  FHPSDQLVAAGVIGGNLHLYRYDA--NALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASG
        F    +L+A+      +  Y  +   + + + + +   H      V F +D R I++ S D ++   DVETGS+I  L    + A     N  S  I SG
Subjt:  FHPSDQLVAAGVIGGNLHLYRYDA--NALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIASG

Query:  DDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMK-NGRKVICGSQNGTLLLY--SWGF
          +  +++WD     C     AH D ++ + +  D + ++++S DG   +W+             E   +S V    NG+ ++ G+ + TL L+  S   
Subjt:  DDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMK-NGRKVICGSQNGTLLLY--SWGF

Query:  FQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLW
        F       V+A     +A    +  R++  SE   + +  +   +++Q +  H++  V  +A       + S S D  +++W
Subjt:  FQDCSDRFVDASQNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLW

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein1.5e-1025.26Show/hide
Query:  FHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL-INITSETIASGD
        F  S+ LVAAG   G + L+  +   + + L     H  +C +V F   G    +GS D ++   D+     I   +  H   V+ L        I SG 
Subjt:  FHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL-INITSETIASGD

Query:  DNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSW
        ++  +KVWD         FK+HE  I  + +      L   S D ++  W+L   +L          +  +    +G+ V+CG Q  +L ++SW
Subjt:  DNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSW

AT5G23430.1 Transducin/WD40 repeat-like superfamily protein5.9e-1024.74Show/hide
Query:  FHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL-INITSETIASGD
        F  S+ LVAAG   G + L+  +   + + L     H  +C +V F   G    +GS D ++   D+     I   +  H   V+ L        + SG 
Subjt:  FHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKL-INITSETIASGD

Query:  DNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSW
        ++  +KVWD       + FK+HE  I  + +      L   S D ++  W+L   +L          +  +    +G+ V+CG Q  +L ++SW
Subjt:  DNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAAACCTTGCAGACATTCCTTTCGACTTGGACTTCCATCCATCCGATCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTTCACTTGTACCGTTATGATGC
AAATGCTTTACCCCAAAAGCTTTTTAAAGTTCGAGCGCATGCCAAATCTTGCAGAGCTGTTAGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCCTCAGACCATT
CCATTCTCTCTACAGACGTGGAGACTGGTTCTGTTATTGCCCGTCTTGAAGATGCACATGATGAAGCAGTCAGTAAACTGATCAACATAACCTCGGAAACGATTGCTTCA
GGGGATGACAATGGTGCCATCAAGGTATGGGATACCAGACAACGTTCTTGCTGCAGTTCTTTCAAAGCCCATGAAGATTATATTTCAGATATGACCTATTTATCTGATTC
CACGAAGCTTTTGGCAACAAGTGGAGATGGGTCTCTATCTGTATGGAATCTTAGGAGAAACAAGCTCCATGCTCGATCTGAGTTTTCAGAAGAAGAGCTACTATCTGTTG
TTACAATGAAGAATGGACGTAAAGTCATCTGTGGATCACAAAATGGAACTCTTTTATTGTATTCATGGGGTTTCTTCCAGGACTGCAGTGATCGCTTTGTTGATGCCTCT
CAAAATCCTGTGAATGCATTGCTAAAGCTTGATGAAGACCGGGTCATTGTTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGTATATTGCCCAATAGAGTAATTCAACC
AATTGCAGAACACTCTGACTACCCTGTGGAGCGTCTTGCTTTCTCTCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGATAAAGCTGTGGGATATGGATT
TATTGCAAAGTTCTGGAAACGCTCCTACTACTACGGTAGAAGCAAGTGCAAGTGTCAATAGTTTTACTTTCACGGACGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAAACCTTGCAGACATTCCTTTCGACTTGGACTTCCATCCATCCGATCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTTCACTTGTACCGTTATGATGC
AAATGCTTTACCCCAAAAGCTTTTTAAAGTTCGAGCGCATGCCAAATCTTGCAGAGCTGTTAGATTCATCAATGACGGACGTGCAATTTTGACTGGTTCCTCAGACCATT
CCATTCTCTCTACAGACGTGGAGACTGGTTCTGTTATTGCCCGTCTTGAAGATGCACATGATGAAGCAGTCAGTAAACTGATCAACATAACCTCGGAAACGATTGCTTCA
GGGGATGACAATGGTGCCATCAAGGTATGGGATACCAGACAACGTTCTTGCTGCAGTTCTTTCAAAGCCCATGAAGATTATATTTCAGATATGACCTATTTATCTGATTC
CACGAAGCTTTTGGCAACAAGTGGAGATGGGTCTCTATCTGTATGGAATCTTAGGAGAAACAAGCTCCATGCTCGATCTGAGTTTTCAGAAGAAGAGCTACTATCTGTTG
TTACAATGAAGAATGGACGTAAAGTCATCTGTGGATCACAAAATGGAACTCTTTTATTGTATTCATGGGGTTTCTTCCAGGACTGCAGTGATCGCTTTGTTGATGCCTCT
CAAAATCCTGTGAATGCATTGCTAAAGCTTGATGAAGACCGGGTCATTGTTGCATCTGAGAGTGGACTCATCAGTCTGGTAGGTATATTGCCCAATAGAGTAATTCAACC
AATTGCAGAACACTCTGACTACCCTGTGGAGCGTCTTGCTTTCTCTCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGATAAAGCTGTGGGATATGGATT
TATTGCAAAGTTCTGGAAACGCTCCTACTACTACGGTAGAAGCAAGTGCAAGTGTCAATAGTTTTACTTTCACGGACGACTAG
Protein sequenceShow/hide protein sequence
MEINLADIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQKLFKVRAHAKSCRAVRFINDGRAILTGSSDHSILSTDVETGSVIARLEDAHDEAVSKLINITSETIAS
GDDNGAIKVWDTRQRSCCSSFKAHEDYISDMTYLSDSTKLLATSGDGSLSVWNLRRNKLHARSEFSEEELLSVVTMKNGRKVICGSQNGTLLLYSWGFFQDCSDRFVDAS
QNPVNALLKLDEDRVIVASESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMIKLWDMDLLQSSGNAPTTTVEASASVNSFTFTDD