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Cucsat.G12806 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12806
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSWIM-type domain-containing protein
Genome locationctg1838:4677971..4680689
RNA-Seq ExpressionCucsat.G12806
SyntenyCucsat.G12806
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032265.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.21e-4986Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+S LEAIREFLQ+ FYERRK ASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
KAA0036930.1 uncharacterized protein E6C27_scaffold86G00020 [Cucumis melo var. makuwa]1.03e-4785Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLL+AIREFLQ+ FYERRK AS  KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
KAA0042333.1 uncharacterized protein E6C27_scaffold795G00290 [Cucumis melo var. makuwa]3.62e-4885Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLLEAIREFLQ+ FYERRK  SC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+ GKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
TYK03234.1 uncharacterized protein E5676_scaffold298G00470 [Cucumis melo var. makuwa]5.47e-5087Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLLEAIREFLQ+ FYERRK ASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
TYK15459.1 uncharacterized protein E5676_scaffold477G00290 [Cucumis melo var. makuwa]2.21e-4986Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESL SKLKIDRDL V+SLLEAIREFLQ+ FYERRKTASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS +CLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
TrEMBL top hitse value%identityAlignment
A0A5A7SST5 MuDRA-like transposase1.07e-4986Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+S LEAIREFLQ+ FYERRK ASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
A0A5A7TGH6 SWIM-type domain-containing protein1.75e-4885Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLLEAIREFLQ+ FYERRK  SC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+ GKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
A0A5D3BEQ2 SWIM-type domain-containing protein5.00e-4885Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLL+AIREFLQ+ FYERRK AS  KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
A0A5D3BVP4 SWIM-type domain-containing protein2.65e-5087Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESLNSKLKIDRDL V+SLLEAIREFLQ+ FYERRK ASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS SCLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
A0A5D3CZ48 SWIM-type domain-containing protein1.07e-4986Show/hide
Query:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
        M TNICESL SKLKIDRDL V+SLLEAIREFLQ+ FYERRKTASC KSVLSSWAEG IRKLVDESRSFIVN VSE EFQ+V+GGKNFLVKLNCNS +CLF
Subjt:  MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACAAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACTTGTTTCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACAACGATTTTA
TGAGAGAAGAAAAACAGCCTCATGTTCAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACCAATAAGAAAGCTAGTTGATGAATCACGAAGCTTCATTGTTAATCTTGTGA
GTGAAGATGAATTTCAAATAGTTAACGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTATAGTTGTCTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAACAAATATTTGTGAAAGCTTGAATTCTAAGTTGAAGATTGATAGAGACTTACTTGTTTCATCCTTGCTTGAGGCCATTAGAGAGTTTCTTCAACAACGATTTTA
TGAGAGAAGAAAAACAGCCTCATGTTCAAAGAGTGTTTTGAGTTCTTGGGCTGAAGGACCAATAAGAAAGCTAGTTGATGAATCACGAAGCTTCATTGTTAATCTTGTGA
GTGAAGATGAATTTCAAATAGTTAACGGAGGCAAGAATTTTTTAGTAAAGTTGAATTGTAATAGCTATAGTTGTCTTTTTTAG
Protein sequenceShow/hide protein sequence
MRTNICESLNSKLKIDRDLLVSSLLEAIREFLQQRFYERRKTASCSKSVLSSWAEGPIRKLVDESRSFIVNLVSEDEFQIVNGGKNFLVKLNCNSYSCLF