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Cucsat.G12807 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12807
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUbiquitin-like protein ATG12
Genome locationctg1838:4691653..4694099
RNA-Seq ExpressionCucsat.G12807
SyntenyCucsat.G12807
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000422 - autophagy of mitochondrion (biological process)
GO:0006501 - C-terminal protein lipidation (biological process)
GO:0044804 - autophagy of nucleus (biological process)
GO:0034045 - phagophore assembly site membrane (cellular component)
GO:0034274 - Atg12-Atg5-Atg16 complex (cellular component)
InterPro domainsIPR007242 - Ubiquitin-like protein Atg12
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151012.1 ubiquitin-like protein ATG12 [Cucumis sativus]1.51e-59100Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_008464001.1 PREDICTED: ubiquitin-like protein ATG12 [Cucumis melo]4.33e-5998.95Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_022153405.1 ubiquitin-like protein ATG12 [Momordica charantia]3.99e-5594.74Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_022955552.1 ubiquitin-like protein ATG12 [Cucurbita moschata]2.81e-5593.68Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSSA+KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

XP_038878493.1 ubiquitin-like protein ATG12 [Benincasa hispida]8.74e-5998.95Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

TrEMBL top hitse value%identityAlignment
A0A0A0LIA6 Ubiquitin-like protein ATG127.32e-60100Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A1S3CKI1 Ubiquitin-like protein ATG122.10e-5998.95Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        MTSTESS+SARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1DGR5 Ubiquitin-like protein ATG121.93e-5594.74Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSS RKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETV DLY+NFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1GTZ1 Ubiquitin-like protein ATG121.36e-5593.68Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESSSSA+KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

A0A6J1J054 Ubiquitin-like protein ATG121.12e-5491.58Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M S ESS+S++KVVVLLR+ GDAPILKQ KFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

SwissProt top hitse value%identityAlignment
A2YAG8 Ubiquitin-like protein ATG127.6e-3066.29Show/hide
Query:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE +IDLYNNFGIDG+LVVNYA SMAWG
Subjt:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q1SF86 Ubiquitin-like protein ATG121.4e-3676.84Show/hide
Query:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        M + ES +S RKVVV LRATGDAPILKQ+KFK+ GTDKF KVID++RR + R++LFV+VNSAFSP PDE VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  MTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q69NP0 Ubiquitin-like protein ATG127.6e-3066.29Show/hide
Query:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        ++  +KVVV  R+TG+AP LKQ+KFK+ G +KF+K+ID++RR I +DT+F++VNSAFSP PDE +IDLYNNFGIDG+LVVNYA SMAWG
Subjt:  SSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q8S924 Ubiquitin-like protein ATG12A1.9e-3677.66Show/hide
Query:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        T + S SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Q9LVK3 Ubiquitin-like protein ATG12B3.9e-3473.12Show/hide
Query:  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        +TES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

Arabidopsis top hitse value%identityAlignment
AT1G54210.1 Ubiquitin-like superfamily protein1.3e-3777.66Show/hide
Query:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        T + S SS RKVVV LRATG APILKQ+KFK+PGTDKF KVID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

AT1G54210.2 Ubiquitin-like superfamily protein4.0e-1043.62Show/hide
Query:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        T + S SS RKVVV LRATG APILKQ+KFK                                            NFG DGKLVVNYACSMAWG
Subjt:  TSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG

AT3G13970.1 Ubiquitin-like superfamily protein2.8e-3573.12Show/hide
Query:  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG
        +TES +S +K+VV LRATG APILKQ+KFK+ G+DKF  VID++RR +  D+LFV+VNSAFSP PDE+VIDLYNNFG DGKLVVNYACSMAWG
Subjt:  STESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYNNFGIDGKLVVNYACSMAWG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCACGGACTCCTACGAACTTACCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACTCCACGAGAACGGGGATCCCGTAGTTCACGGCGAAGGAAAACGATGACTTC
TACAGAGTCATCCAGTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCCGGAACAGACAAATTTA
TTAAAGTGATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAAT
AACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA
mRNA sequenceShow/hide mRNA sequence
CCACGGACTCCTACGAACTTACCCAACCAATATCTTTTGATCGAAATCGGAGAACGTACTCCACGAGAACGGGGATCCCGTAGTTCACGGCGAAGGAAAACGATGACTTC
TACAGAGTCATCCAGTTCTGCTCGAAAAGTGGTTGTCCTGTTGAGAGCTACTGGGGATGCTCCCATTCTCAAACAAACTAAGTTTAAGATGCCCGGAACAGACAAATTTA
TTAAAGTGATTGATTATATACGCCGGTCCATTCAACGGGACACCTTGTTTGTGTTTGTCAACAGTGCATTCTCACCGGGTCCAGATGAGACAGTTATTGATCTATATAAT
AACTTTGGAATTGATGGGAAGTTGGTGGTAAATTATGCCTGCTCCATGGCTTGGGGCTAA
Protein sequenceShow/hide protein sequence
PRTPTNLPNQYLLIEIGERTPRERGSRSSRRRKTMTSTESSSSARKVVVLLRATGDAPILKQTKFKMPGTDKFIKVIDYIRRSIQRDTLFVFVNSAFSPGPDETVIDLYN
NFGIDGKLVVNYACSMAWG