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Cucsat.G1283 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1283
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionIsoleucyl-tRNA synthetase
Genome locationctg1:10828155..10829332
RNA-Seq ExpressionCucsat.G1283
SyntenyCucsat.G1283
Gene Ontology termsGO:0006428 - isoleucyl-tRNA aminoacylation (biological process)
GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0002161 - aminoacyl-tRNA editing activity (molecular function)
GO:0004822 - isoleucine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018610.1 Isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.63e-4064.46Show/hide
Query:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML-------------------------SEDVFVLTGNKKKRPGNIPKKGKR
        STLRGILQEAY  FLDW RKVHLQA CYKNF +TCAWPYGLQLLGLFQPML                         SEDV  L+GNKKKRPGNI  +  R
Subjt:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML-------------------------SEDVFVLTGNKKKRPGNIPKKGKR

Query:  TFLLVATDLVPTSEAKWGVKL
         FL+VA+DLVPT EAKWGVKL
Subjt:  TFLLVATDLVPTSEAKWGVKL

XP_011651056.2 isoleucine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus]1.07e-2385.25Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SEDV VLTGNKKKRPGNI K+GKR FL+VA+DLVPT EAKWGVKLVVKKKLLGSELENC +
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

XP_011651057.1 uncharacterized protein LOC105434843 isoform X1 [Cucumis sativus]1.49e-5783.65Show/hide
Query:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKK
        ST RGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVL GNKKKRPGNIPK+GKRTFLLVATDLVPT  +K G +   ++
Subjt:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKK

Query:  KLLG
        +++G
Subjt:  KLLG

XP_011651059.1 uncharacterized protein LOC105434843 isoform X2 [Cucumis sativus]7.48e-4673.08Show/hide
Query:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKK
        ST RGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML            KRPGNIPK+GKRTFLLVATDLVPT  +K G +   ++
Subjt:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKK

Query:  KLLG
        +++G
Subjt:  KLLG

XP_011651060.1 uncharacterized protein LOC105434843 isoform X3 [Cucumis sativus]1.78e-2991.07Show/hide
Query:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVF
        ST RGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML   +F
Subjt:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVF

TrEMBL top hitse value%identityAlignment
A0A0A0L7W8 Uncharacterized protein4.77e-5267.44Show/hide
Query:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML-------------------------SEDVFVLTGNKKKRPGNIPKKGKR
        ST RGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML                         SEDVFVL GNKKKRPGNIPK+GKR
Subjt:  STLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPML-------------------------SEDVFVLTGNKKKRPGNIPKKGKR

Query:  TFLLVATDLVPTSEAKWGVKLVVKKKLLG
        TFLLVATDLVPT  +K G +   +++++G
Subjt:  TFLLVATDLVPTSEAKWGVKLVVKKKLLG

A0A1S3AY52 Isoleucyl-tRNA synthetase8.40e-2380.33Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED  VLTGNKKK+PGNI K+GKR FL+VA+DLVPT EAKWGVK+VVKKKLLGSELENC +
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

A0A5A7U5N1 Isoleucyl-tRNA synthetase7.37e-2278.69Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED  VLTGNKKK+PGNI K+GKR FL+VA+DLVPT EAKW VK+VVKKKLLGSELENC +
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

A0A5D3D0J5 Isoleucyl-tRNA synthetase6.00e-2278.69Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED  VLTGNKKK+PGNI K+GKR FL+VA+DLVPT EAKW VK+VVKKKLLGSELENC +
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

A0A6J1GYE1 Isoleucyl-tRNA synthetase3.47e-2178.69Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SEDV  L+GNKKKRPGNI  +  R FL+VA+DLVPT EAKWGVKLVVKKKLLGSELENCR+
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

SwissProt top hitse value%identityAlignment
Q8RXK8 Isoleucine--tRNA ligase, chloroplastic/mitochondrial2.2e-1459.02Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED   +T NKKK PG + K  ++ F++VATDLVP  EAKWGVKL + K  LGS+LENCR+
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

Arabidopsis top hitse value%identityAlignment
AT5G49030.1 tRNA synthetase class I (I, L, M and V) family protein1.6e-1559.02Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED   +T NKKK PG + K  ++ F++VATDLVP  EAKWGVKL + K  LGS+LENCR+
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

AT5G49030.2 tRNA synthetase class I (I, L, M and V) family protein1.6e-1559.02Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED   +T NKKK PG + K  ++ F++VATDLVP  EAKWGVKL + K  LGS+LENCR+
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF

AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein1.6e-1559.02Show/hide
Query:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF
        SED   +T NKKK PG + K  ++ F++VATDLVP  EAKWGVKL + K  LGS+LENCR+
Subjt:  SEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLVPTSEAKWGVKLVVKKKLLGSELENCRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGATTCCTGTCATTTGCTCAAATTTGGTTATATCATTTTTTTCCTGCCCTACCTGTTTGATAATTGCATTCAGTACCCTGAGGGGCATACTTCAAGAAGCATATAC
GCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGAATTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTTGGACTATTCCAGC
CAATGCTGTCTGAAGATGTCTTTGTTTTGACTGGAAATAAAAAGAAAAGGCCTGGTAATATTCCGAAGAAGGGAAAGAGGACTTTCCTTCTAGTAGCAACAGATCTTGTG
CCAACTTCGGAAGCAAAATGGGGTGTGAAGCTTGTTGTCAAGAAGAAATTGTTGGGTTCAGAACTTGAAAACTGCAGGTTTTATTTCTTTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGATTCCTGTCATTTGCTCAAATTTGGTTATATCATTTTTTTCCTGCCCTACCTGTTTGATAATTGCATTCAGTACCCTGAGGGGCATACTTCAAGAAGCATATAC
GCCATTTTTAGATTGGTTAAGGAAGGTCCATCTTCAGGCGGTGTGCTACAAGAATTTTTCCGAGACTTGTGCTTGGCCATATGGACTACAACTCCTTGGACTATTCCAGC
CAATGCTGTCTGAAGATGTCTTTGTTTTGACTGGAAATAAAAAGAAAAGGCCTGGTAATATTCCGAAGAAGGGAAAGAGGACTTTCCTTCTAGTAGCAACAGATCTTGTG
CCAACTTCGGAAGCAAAATGGGGTGTGAAGCTTGTTGTCAAGAAGAAATTGTTGGGTTCAGAACTTGAAAACTGCAGGTTTTATTTCTTTCCCTAA
Protein sequenceShow/hide protein sequence
MLIPVICSNLVISFFSCPTCLIIAFSTLRGILQEAYTPFLDWLRKVHLQAVCYKNFSETCAWPYGLQLLGLFQPMLSEDVFVLTGNKKKRPGNIPKKGKRTFLLVATDLV
PTSEAKWGVKLVVKKKLLGSELENCRFYFFP