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Cucsat.G1286 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1286
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDynein light chain
Genome locationctg1:10904981..10908450
RNA-Seq ExpressionCucsat.G1286
SyntenyCucsat.G1286
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134221.1 dynein light chain 1, cytoplasmic [Cucumis sativus]6.24e-82100Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_016898981.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]7.89e-7694.17Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]7.68e-6280.83Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R  ++P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]2.49e-6080Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R     P  +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]1.38e-6486.67Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQ+S R  ++PPP +VK ES DDRKPSS A +SKKIVIKSADMF+DMQKEAID AIAAFEKHSVEKDIAEQIKK+FDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAM1 Dynein light chain3.02e-82100Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A1S4DSP2 Dynein light chain3.82e-7694.17Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN +SRR TNHPPP IVK ESTDDRKPSSP+PLSKKIVIKSADMFTDMQKEAID AIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKAILLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1C8U0 Dynein light chain8.40e-5977.5Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MNQD++R   +P   +VK ES +DRKPSS  PL++K+VIKSADMF DMQKEA+D AIAAFEK++VEKD+AEQIK+EFDK HGPTWHCIVGRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1G0U9 Dynein light chain3.72e-6280.83Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R  ++P P +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

A0A6J1IC60 Dynein light chain1.20e-6080Show/hide
Query:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE
        MN DS+R     P  +VK ES +DRKPSS AP+ KKIVIKSADMF DMQKEA+D AIAAFEKHSVEKD+AEQIKKEFDK HGPTWHC++GRNFGSYVTHE
Subjt:  MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHE

Query:  TNHFVYFYLDQKAILLFKSG
        TNHFVYFYLDQKA+LLFKSG
Subjt:  TNHFVYFYLDQKAILLFKSG

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic8.4e-3171.59Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        + +K VIK+ADM  DMQ++AID A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q3MHR3 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q78P75 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q96FJ2 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Q9D0M5 Dynein light chain 2, cytoplasmic1.4e-3072.09Show/hide
Query:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG
        +K VIK+ADM  DMQ++A+D A  A EK+++EKDIA  IKKEFDK + PTWHCIVGRNFGSYVTHET HF+YFYL Q AILLFKSG
Subjt:  KKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.1e-1341.67Show/hide
Query:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        ++++DM    Q  A   +   + A    +  K +A  +KK+FD  +GP WHCIVG +FGSYVTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS

AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.2e-1240.91Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K +++ +DM   MQ +A+  A  A +   V   K IA  IKKEFD+ +G  W C+VG NFG + TH    F+YF L+    L+FK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVE--KDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT4G15930.1 Dynein light chain type 1 family protein2.3e-3977.67Show/hide
Query:  DDRKPSSP-----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF
        DDR+ S P      P  K+ VIKSADM  DMQKEAI+ AI+AFEK+SVEKDIAE IKKEFDK HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLF
Subjt:  DDRKPSSP-----APLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLF

Query:  KSG
        KSG
Subjt:  KSG

AT4G27360.1 Dynein light chain type 1 family protein1.5e-1142.05Show/hide
Query:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK
        L  K V+   DM   M+++A+  A  A +   V +   IA  IKKEFD+++G  W CIVG +FGS+VTH +  F++F +    ILLFK
Subjt:  LSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEK--DIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFK

AT5G20110.1 Dynein light chain type 1 family protein8.7e-1550Show/hide
Query:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS
        I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FGS+VTH T  F+YF +D+  +LLFK+
Subjt:  IKSADMFTDMQKEAIDTA---IAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGATTCTCGCCGCCCCACCAATCATCCTCCACCTCCAATTGTCAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAAT
CGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAA
AGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGATCTTATGTAACACACGAAACAAACCATTTTGTTTACTTCTACCTCGAT
CAAAAAGCAATTCTACTTTTCAAATCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAAGATTCTCGCCGCCCCACCAATCATCCTCCACCTCCAATTGTCAAGCTTGAATCTACAGATGATCGCAAACCCTCATCTCCCGCTCCCCTCTCCAAGAAAAT
CGTCATCAAGAGCGCCGATATGTTCACTGACATGCAGAAGGAGGCTATTGACACTGCCATAGCCGCATTTGAGAAACATTCCGTTGAGAAGGATATTGCCGAACAGATAA
AGAAAGAGTTTGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGATCTTATGTAACACACGAAACAAACCATTTTGTTTACTTCTACCTCGAT
CAAAAAGCAATTCTACTTTTCAAATCTGGTTGA
Protein sequenceShow/hide protein sequence
MNQDSRRPTNHPPPPIVKLESTDDRKPSSPAPLSKKIVIKSADMFTDMQKEAIDTAIAAFEKHSVEKDIAEQIKKEFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLD
QKAILLFKSG