; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1290 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1290
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionPectin lyase-like superfamily protein
Genome locationctg1:10955595..10957261
RNA-Seq ExpressionCucsat.G1290
SyntenyCucsat.G1290
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049518.1 exopolygalacturonase-like [Cucumis melo var. makuwa]3.40e-15481.41Show/hide
Query:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
        VGDPWSGLRVFDV+DYG VADGKTN++LALMAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSL
Subjt:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL

Query:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAI-----------------SLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTD
        TAGHLST+DG+GAQTWSSGS CR A+TC MFA                  SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTD
Subjt:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAI-----------------SLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTD

Query:  GFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        G HISQSTNI+ITNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGISIGSLG+YKME DV GI VENCT
Subjt:  GFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

KAE8650398.1 hypothetical protein Csa_010965 [Cucumis sativus]1.25e-157100Show/hide
Query:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
        VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
Subjt:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL

Query:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
        TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
Subjt:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI

Query:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGI
        GVGDDCVSIGPGSVNVLVSNVTCGPGHGI
Subjt:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGI

XP_004134495.1 exopolygalacturonase [Cucumis sativus]3.01e-185100Show/hide
Query:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
        VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
Subjt:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL

Query:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
        TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
Subjt:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI

Query:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
Subjt:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

XP_016898978.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]3.80e-13886.49Show/hide
Query:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRGAQTWSSGSRCRHAMTCAM
        MAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+GAQTWSSGS CR A+TC M
Subjt:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRGAQTWSSGSRCRHAMTCAM

Query:  FAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGIS
        FA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTDG HISQSTNI++TNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGIS
Subjt:  FAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGIS

Query:  IGSLGRYKMENDVRGIWVENCT
        IGSLG+YKME DV GI VENCT
Subjt:  IGSLGRYKMENDVRGIWVENCT

XP_038885913.1 exopolygalacturonase-like [Benincasa hispida]1.01e-13776.98Show/hide
Query:  GDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLT
        GDPW GLRVFDVNDYG +ADGKT NSLA M+AWEDAC + G SM+LIPEGN+FVDQVTFSGPCFND+SPKVLILGTLIAPT+L  D WI F SLRR  LT
Subjt:  GDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLT

Query:  AGHLST-LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
         G  S  LDG+GA TWSSGS CRH MTC  FA SLKLSN+ NG V++I LVDSK FHVSI+ CDNIHLSGFNITAPW SQNTDG HISQSTNISIT S I
Subjt:  AGHLST-LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI

Query:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        GVGDDCVS+GPG VNV +S++ CGPGHGIS+GSLG+YK ENDV GI VENCT
Subjt:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

TrEMBL top hitse value%identityAlignment
A0A0A0L932 Uncharacterized protein1.46e-185100Show/hide
Query:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
        VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
Subjt:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL

Query:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
        TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI
Subjt:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKI

Query:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
Subjt:  GVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

A0A1S4DSN8 exopolygalacturonase-like1.84e-13886.49Show/hide
Query:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRGAQTWSSGSRCRHAMTCAM
        MAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+GAQTWSSGS CR A+TC M
Subjt:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRGAQTWSSGSRCRHAMTCAM

Query:  FAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGIS
        FA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTDG HISQSTNI++TNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGIS
Subjt:  FAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGIS

Query:  IGSLGRYKMENDVRGIWVENCT
        IGSLG+YKME DV GI VENCT
Subjt:  IGSLGRYKMENDVRGIWVENCT

A0A5A7U2P8 Exopolygalacturonase-like1.65e-15481.41Show/hide
Query:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL
        VGDPWSGLRVFDV+DYG VADGKTN++LALMAAWEDACY++G SMLLIPEGNY VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSL
Subjt:  VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSL

Query:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAI-----------------SLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTD
        TAGHLST+DG+GAQTWSSGS CR A+TC MFA                  SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFNITAPW SQNTD
Subjt:  TAGHLSTLDGRGAQTWSSGSRCRHAMTCAMFAI-----------------SLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTD

Query:  GFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        G HISQSTNI+ITNS IGVGDDCVSIGPGSVNV VSNVTCGPGHGISIGSLG+YKME DV GI VENCT
Subjt:  GFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

A0A6J1FMM1 exopolygalacturonase-like1.37e-10970.98Show/hide
Query:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST--LDGRGAQTWSSGSRCRHAMTC
        M AWEDAC ++G S LLIPEG++F+ QV FSGPCF DLSPKV+ILGTLIAPT LTADVWI+F SLR L++T G++ +  LDG+GA+TW  G  CRH ++C
Subjt:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST--LDGRGAQTWSSGSRCRHAMTC

Query:  AMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHG
         +F  SLKLS+V N TVS+I+LV+SK FHV+++ CDNIHLSGFNITAPW SQNTDG HISQSTNI+IT S I VGDDCVSIGPGS+NV VSNV CGPGHG
Subjt:  AMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHG

Query:  ISIGSLGRYKMENDVRGIWVENCT
        IS+GSLGRY+ E DV GI VENCT
Subjt:  ISIGSLGRYKMENDVRGIWVENCT

A0A6J1I855 exopolygalacturonase-like1.12e-10870.09Show/hide
Query:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST--LDGRGAQTWSSGSRCRHAMTC
        M AWEDAC ++G S  LIPEG++F+ QV FSGPCF DLSPKV+ILGTLIAPT LTADVWI+F SLR+L++T G++ +  LDG+GA+TW  G  CRH ++C
Subjt:  MAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST--LDGRGAQTWSSGSRCRHAMTC

Query:  AMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHG
         +F  SLKLS+V N TVS+I+LV+SK FHV+++ CDNIHLSGF ITAPW SQNTDG HISQSTNI+IT S I VGDDCVSIGPGS+NV VSNV CGPGHG
Subjt:  AMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHG

Query:  ISIGSLGRYKMENDVRGIWVENCT
        IS+GSLGRY+ E DV GI VENCT
Subjt:  ISIGSLGRYKMENDVRGIWVENCT

SwissProt top hitse value%identityAlignment
P26216 Exopolygalacturonase1.2e-5043.09Show/hide
Query:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS
        FD+   G   +GKT+++ A+  AW  AC   G   +LIP+G++ V Q+ F+GPC  D++  + + G L+A T+L+       WI    +  L +T     
Subjt:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS

Query:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC
         LDG+G   WS  S C     C +   SL +  V NG VS + L++SK FH+++++C ++ +    +TAP  S NTDG H+  S+ I+ITN+ IGVGDDC
Subjt:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC

Query:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        +SIGPG+  V ++ VTCGPGHGISIGSLGRYK E DV  I V++CT
Subjt:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

P35338 Exopolygalacturonase1.1e-5143.9Show/hide
Query:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS
        FD+   G   +GKT+++ A+  AW  AC   G   +LIP+G++ V Q+ F+GPC  D++  + + G L+A T+L+       WI    +  L +T     
Subjt:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS

Query:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC
         LDG+G   WS  S C     C +   SL +  V NG VS + L++SK FH++++QC N+ +    +TAP  S NTDG H+  S+ I+ITN+ IGVGDDC
Subjt:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC

Query:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        +SIGPG+  V ++ VTCGPGHGISIGSLGRYK E DV  I V++CT
Subjt:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

P35339 Exopolygalacturonase2.0e-5043.09Show/hide
Query:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS
        FD+   G   +GKT+++ A+  AW  AC   G   +LIP+G++ V  + F+GPC  D++  + + G L+A T+L+       WI    +  L +T     
Subjt:  FDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTA----DVWIHFDSLRRLSLTAGHLS

Query:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC
         LDG+G   WS  S C     C +   SL +  V NG VS I L++SK FH+++++C ++ +   N+TAP  S NTDG H+  S+ ++ITN+ IGVGDDC
Subjt:  TLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDC

Query:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        +SIGPG+  V ++ VTCGPGHGISIGSLGRYK E DV  I V++CT
Subjt:  VSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

P49062 Exopolygalacturonase clone GBGE1844.2e-4840.57Show/hide
Query:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN-LTADVWIHFDSLRRLSLTAGHLSTL
        V+D+  +G V DG TN   A +  W   C     + LL+P+G +    V F+GPC + ++  V ++GT+IA T+      W  F+ +  L LT     T 
Subjt:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN-LTADVWIHFDSLRRLSLTAGHLSTL

Query:  DGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVS
         G+G   W +   C   + C +   SLK  N+ N  ++ I+ V++KAFH+ + + +N+++    +TAP  S NTDG H+S + N+SI +S I  GDDCVS
Subjt:  DGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVS

Query:  IGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        +G GS NV V  V CGPGHG+S+GSLG+YK E DV GI V NCT
Subjt:  IGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

Q6H9K0 Exopolygalacturonase (Fragment)3.8e-4942.86Show/hide
Query:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVL--ILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST
        VF+VNDYG  A G  + S A+M AW+ AC  QG S +LIP+GNY + +V   GPC        +  ++     P+   +D W+ F   R   LT     T
Subjt:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVL--ILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLST

Query:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV
        LDG+G   W+  + C     C   A++L+   + +  V  I  ++SK FH+++ +C++I      +TAP  S NTDG H+  S  ++ITN+KI  GDDC+
Subjt:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV

Query:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        SIGPGS NV ++ V CGPGHGISIGSLGRY  E +VRGI V+ CT
Subjt:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

Arabidopsis top hitse value%identityAlignment
AT1G02790.1 polygalacturonase 43.0e-4940.57Show/hide
Query:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN-LTADVWIHFDSLRRLSLTAGHLSTL
        V+D+  +G V DG TN   A +  W   C     + LL+P+G +    V F+GPC + ++  V ++GT+IA T+      W  F+ +  L LT     T 
Subjt:  VFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN-LTADVWIHFDSLRRLSLTAGHLSTL

Query:  DGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVS
         G+G   W +   C   + C +   SLK  N+ N  ++ I+ V++KAFH+ + + +N+++    +TAP  S NTDG H+S + N+SI +S I  GDDCVS
Subjt:  DGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVS

Query:  IGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT
        +G GS NV V  V CGPGHG+S+GSLG+YK E DV GI V NCT
Subjt:  IGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT

AT1G17150.1 Pectin lyase-like superfamily protein3.1e-4640.82Show/hide
Query:  RVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN---LTADVWIHFDSLRRLSLTAGHL
        +VFDV  YG   DGK +N+ A   AW+DAC   G S + IP G +++  VTF GPC   +S   +I GTL+AP N   +  ++WI+F  +  L++     
Subjt:  RVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN---LTADVWIHFDSLRRLSLTAGHL

Query:  STLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDD
         TLDG+G ++WS    C+    C   AI++    V N +++ I  ++SKA H +    D+  ++  NI AP  S NTDG  I+ S+N+ I+N+ I  GDD
Subjt:  STLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDD

Query:  CVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVEN
        C+++  G+ N  + NV CGPGHGISIGSLG+ K E +V G+ V N
Subjt:  CVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVEN

AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein3.6e-4739.43Show/hide
Query:  RVFDVNDYGGVADGKTNNSLALMAAWEDAC-YHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN---LTADVWIHFDSLRRLSLTAGH
        ++FDV +YG  AD + +N+ A   AW +AC +  G S + IP G +++ QVTFSGPC + ++    I GTL+AP N   +  + WI F  +  L++T G 
Subjt:  RVFDVNDYGGVADGKTNNSLALMAAWEDAC-YHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTN---LTADVWIHFDSLRRLSLTAGH

Query:  LSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGD
        L  LDG+G+ +W     C     C   A+++  + V +  ++ +  ++SK  H ++   ++ +++G  ITAP  S NTDG  I +S+++ I N  IG GD
Subjt:  LSTLDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGD

Query:  DCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVEN
        DC++I  G+ N+ +S+V CGPGHGIS+GSLGRYK E +V+G+ V N
Subjt:  DCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVEN

AT3G07850.1 Pectin lyase-like superfamily protein1.8e-4639.75Show/hide
Query:  DVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADV----WIHFDSLRRLSLTAGHLST
        DV   G   D KT++S A  AAW++AC    GS + +P+G Y V+ + F GPC   ++  + + G   AP  +        WI F+++   +L  G+ + 
Subjt:  DVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADV----WIHFDSLRRLSLTAGHLST

Query:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV
         DG+G+  W +   C     C    I+++ + + N  ++SI   +SK FH++I  C NI LS   I AP  S NTDG HI +S  +++  +KI  GDDCV
Subjt:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV

Query:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENC
        SIG G+ N++V NV CGPGHGISIGSLGRY  E  V+G+ V  C
Subjt:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENC

AT3G14040.1 Pectin lyase-like superfamily protein4.7e-4740.16Show/hide
Query:  DVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADV----WIHFDSLRRLSLTAGHLST
        DV   G   DGKT++S A  AAW++AC    GS + +P+G Y V+ + F GPC   ++  + + G   AP  +        WI F++L   +L  G+ + 
Subjt:  DVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADV----WIHFDSLRRLSLTAGHLST

Query:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV
         DG+G+  W +   C     C    I+++ + + N  ++SI   +SK FH++I  C NI L+   I AP  S NTDG HI +S  +++  +KI  GDDCV
Subjt:  LDGRGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCV

Query:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENC
        SIG G+ N++V NV CGPGHGISIGSLGRY  E  V+G+ V  C
Subjt:  SIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGGAGATCCTTGGAGTGGATTGCGTGTTTTTGATGTAAATGATTATGGGGGAGTTGCTGATGGGAAGACGAACAACAGCTTGGCATTGATGGCGGCGTGGGAAGATGC
ATGTTATCACCAAGGAGGGTCGATGCTGTTAATACCGGAGGGGAATTACTTCGTTGACCAAGTTACATTTTCAGGGCCATGTTTCAATGACCTCTCTCCTAAAGTCCTCA
TTTTAGGCACTTTGATTGCTCCCACCAATCTCACCGCCGACGTTTGGATCCACTTCGATTCCCTCCGCCGCCTCTCCCTCACTGCCGGCCACTTATCCACCCTCGACGGC
CGGGGCGCCCAAACCTGGTCCTCCGGTTCCCGCTGTCGTCATGCAATGACTTGTGCCATGTTTGCCATTTCTTTGAAGCTAAGCAATGTGTTGAATGGGACAGTGAGTAG
TATAAACCTAGTGGACAGCAAGGCGTTTCATGTCTCCATCCATCAGTGTGACAATATTCATCTTTCTGGATTCAATATCACAGCTCCTTGGTATAGTCAAAACACTGATG
GATTCCATATCAGCCAATCTACCAACATCAGCATCACAAACTCAAAAATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGCGTGAACGTGTTGGTTTCTAAT
GTTACATGTGGCCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAGGTACAAAATGGAGAATGATGTGAGAGGAATATGGGTGGAGAATTGTACC
mRNA sequenceShow/hide mRNA sequence
GTGGGAGATCCTTGGAGTGGATTGCGTGTTTTTGATGTAAATGATTATGGGGGAGTTGCTGATGGGAAGACGAACAACAGCTTGGCATTGATGGCGGCGTGGGAAGATGC
ATGTTATCACCAAGGAGGGTCGATGCTGTTAATACCGGAGGGGAATTACTTCGTTGACCAAGTTACATTTTCAGGGCCATGTTTCAATGACCTCTCTCCTAAAGTCCTCA
TTTTAGGCACTTTGATTGCTCCCACCAATCTCACCGCCGACGTTTGGATCCACTTCGATTCCCTCCGCCGCCTCTCCCTCACTGCCGGCCACTTATCCACCCTCGACGGC
CGGGGCGCCCAAACCTGGTCCTCCGGTTCCCGCTGTCGTCATGCAATGACTTGTGCCATGTTTGCCATTTCTTTGAAGCTAAGCAATGTGTTGAATGGGACAGTGAGTAG
TATAAACCTAGTGGACAGCAAGGCGTTTCATGTCTCCATCCATCAGTGTGACAATATTCATCTTTCTGGATTCAATATCACAGCTCCTTGGTATAGTCAAAACACTGATG
GATTCCATATCAGCCAATCTACCAACATCAGCATCACAAACTCAAAAATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGCGTGAACGTGTTGGTTTCTAAT
GTTACATGTGGCCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAGGTACAAAATGGAGAATGATGTGAGAGGAATATGGGTGGAGAATTGTACC
Protein sequenceShow/hide protein sequence
VGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGNYFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDG
RGAQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSN
VTCGPGHGISIGSLGRYKMENDVRGIWVENCT