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Cucsat.G12900 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12900
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionGibberellin regulated protein
Genome locationctg1838:6808517..6809401
RNA-Seq ExpressionCucsat.G12900
SyntenyCucsat.G12900
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591269.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]5.48e-4689.19Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVD+PLP +IDCGE+CDARC+LSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

XP_004136384.1 gibberellin-regulated protein 1 [Cucumis sativus]1.22e-51100Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

XP_008466485.1 PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo]3.91e-4891.89Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +ITTQVDNPLPQ+IDCG+ACDARCRLSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

XP_022975660.1 snakin-2-like [Cucurbita maxima]3.86e-4689.19Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVD+PLP +IDCGE CDARC+LSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

XP_038900123.1 gibberellin-regulated protein 1-like [Benincasa hispida]2.72e-4690.54Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVDNPLP +IDC +ACDARCRLSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LGH8 Gibberellin-regulated protein 15.92e-52100Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

A0A1S3CRE3 gibberellin-regulated protein 1-like1.89e-4891.89Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +ITTQVDNPLPQ+IDCG+ACDARCRLSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

A0A5A7V5C1 Gibberellin-regulated protein 1-like1.89e-4891.89Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +ITTQVDNPLPQ+IDCG+ACDARCRLSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

A0A6J1F9F4 gibberellin-regulated protein 1-like7.60e-4689.19Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        V TTQVD+PLP +IDCGEACDARC+LSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

A0A6J1IHC1 snakin-2-like1.87e-4689.19Show/hide
Query:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        VITTQVD+PLP +IDCGE CDARC+LSSRQKIC+RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Subjt:  VITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 112.5e-2270.49Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        IDC   C  RC LSSR  +C RACGTCC+RC CV PGTSGNYD CPCY ++TTHGGR KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

P46688 Gibberellin-regulated protein 21.1e-2070.49Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        IDCG  C  RC  SSR K+C RAC +CCSRC CVPPGTSGN   CPCYA++TTHGGR KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

P46689 Gibberellin-regulated protein 19.3e-2560.24Show/hide
Query:  MVFQVITTQVDNPLPQD-----IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +V Q++   V+N   ++     IDCG AC ARCRLS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  MVFQVITTQVDNPLPQD-----IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

Q8GWK5 Gibberellin-regulated protein 99.0e-2063.93Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        I+CG AC  RC  +SR+K+C RACG+CC++CQCVPPGTSGN   CPCYA++ THG + KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

Q93X17 Snakin-21.3e-2373.77Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        IDCG AC ARCRLSSR ++C RACGTCC+RC CVPPGTSGN + CPCYA++TTHG + KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

Arabidopsis top hitse value%identityAlignment
AT1G22690.1 Gibberellin-regulated family protein6.4e-2163.93Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        I+CG AC  RC  +SR+K+C RACG+CC++CQCVPPGTSGN   CPCYA++ THG + KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

AT1G75750.1 GAST1 protein homolog 16.6e-2660.24Show/hide
Query:  MVFQVITTQVDNPLPQD-----IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +V Q++   V+N   ++     IDCG AC ARCRLS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  MVFQVITTQVDNPLPQD-----IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

AT1G75750.2 GAST1 protein homolog 11.5e-2567.61Show/hide
Query:  TQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        +Q  N   + IDCG AC ARCRLS R ++C RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Subjt:  TQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

AT2G18420.1 Gibberellin-regulated family protein1.8e-2370.49Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        IDC   C  RC LSSR  +C RACGTCC+RC CV PGTSGNYD CPCY ++TTHGGR KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP

AT4G09610.1 GAST1 protein homolog 27.5e-2270.49Show/hide
Query:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP
        IDCG  C  RC  SSR K+C RAC +CCSRC CVPPGTSGN   CPCYA++TTHGGR KCP
Subjt:  IDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGTCTTATGTTTGTTCTGCTTCTCATTGCTTTTGCTATGCTCCTTATGGAATCAGGCCAAATGGTAATCCTTCTTCCATTTGTTTTCTCTGTTCAGTTTCGATACTTTC
AACTTTTTGGCCTTACCATTTACACGGCATGGTCTTTCAGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCAAGACATAGATTGTGGCGAAGCTTGTGATGCGAGGT
GCCGATTATCGTCGAGGCAGAAGATCTGTGAGAGGGCATGTGGAACCTGTTGCAGTCGCTGTCAATGCGTTCCGCCAGGCACTTCAGGCAACTATGATTTTTGTCCCTGC
TATGCTAATATGACCACACATGGTGGCAGGCACAAGTGTCCCTAG
mRNA sequenceShow/hide mRNA sequence
AGGTCTTATGTTTGTTCTGCTTCTCATTGCTTTTGCTATGCTCCTTATGGAATCAGGCCAAATGGTAATCCTTCTTCCATTTGTTTTCTCTGTTCAGTTTCGATACTTTC
AACTTTTTGGCCTTACCATTTACACGGCATGGTCTTTCAGGTTATCACAACTCAGGTGGATAACCCTCTTCCTCAAGACATAGATTGTGGCGAAGCTTGTGATGCGAGGT
GCCGATTATCGTCGAGGCAGAAGATCTGTGAGAGGGCATGTGGAACCTGTTGCAGTCGCTGTCAATGCGTTCCGCCAGGCACTTCAGGCAACTATGATTTTTGTCCCTGC
TATGCTAATATGACCACACATGGTGGCAGGCACAAGTGTCCCTAG
Protein sequenceShow/hide protein sequence
RSYVCSASHCFCYAPYGIRPNGNPSSICFLCSVSILSTFWPYHLHGMVFQVITTQVDNPLPQDIDCGEACDARCRLSSRQKICERACGTCCSRCQCVPPGTSGNYDFCPC
YANMTTHGGRHKCP