; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12928 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12928
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription factor HY5
Genome locationctg1838:7307338..7311010
RNA-Seq ExpressionCucsat.G12928
SyntenyCucsat.G12928
Gene Ontology termsGO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010099 - regulation of photomorphogenesis (biological process)
GO:0010114 - response to red light (biological process)
GO:0010218 - response to far red light (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038802.1 transcription factor HY5 [Cucumis melo var. makuwa]1.22e-7495Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISAPGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRH+
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI

TYK31424.1 transcription factor HY5 [Cucumis melo var. makuwa]1.82e-7696.43Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRH+
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI

XP_004136344.1 transcription factor HY5 [Cucumis sativus]1.71e-90100Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS

XP_008466392.1 PREDICTED: transcription factor HY5 [Cucumis melo]9.07e-8695.51Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK

XP_022981220.1 transcription factor HY5-like isoform X1 [Cucurbita maxima]6.99e-6681.13Show/hide
Query:  MQGRASA-ATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVG-ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQA
        MQ R +A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S  G  SA GKAPASD VRSRGRS+A+KESKRLKRLLRNRVSAQQA
Subjt:  MQGRASA-ATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVG-ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQA

Query:  RERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RERKK YL +LE RA NL K+NSELEE LSTLQNENQMLRHILKNTTTNKRSDGD A +
Subjt:  RERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS

TrEMBL top hitse value%identityAlignment
A0A0A0LJB7 BZIP domain-containing protein8.27e-91100Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS

A0A1S3CSG2 transcription factor HY54.39e-8695.51Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRHILKNTTTNK+SD DA K
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAK

A0A5A7T5P8 Transcription factor HY55.92e-7595Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTVGISAPGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRH+
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI

A0A5D3E623 Transcription factor HY58.80e-7796.43Show/hide
Query:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+AA +SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI
        RKKVYLSELEERATNLEK+NSELEEKLSTLQNENQMLRH+
Subjt:  RKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHI

A0A6J1IYV9 transcription factor HY5-like isoform X13.38e-6681.13Show/hide
Query:  MQGRASA-ATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVG-ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQA
        MQ R +A A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S  G  SA GKAPASD VRSRGRS+A+KESKRLKRLLRNRVSAQQA
Subjt:  MQGRASA-ATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVG-ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQA

Query:  RERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RERKK YL +LE RA NL K+NSELEE LSTLQNENQMLRHILKNTTTNKRSDGD A +
Subjt:  RERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS

SwissProt top hitse value%identityAlignment
A2VD01 Cyclic AMP-responsive element-binding protein 3-like protein 23.9e-0440.98Show/hide
Query:  AAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQML
        A EK  K+++R ++N++SAQ++R +KK Y+  LE+R  N   +NSEL +K+  L++ N+ L
Subjt:  AAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQML

O24646 Transcription factor HY52.6e-3261.31Show/hide
Query:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG----------NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLL
        MQ +A S+   S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G           SGS  G     +A   +S R RGR+ AEKE+KRLKRLL
Subjt:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG----------NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLL

Query:  RNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RNRVSAQQARERKK YLSELE R  +LE KNSELEE+LSTLQNENQMLRHILKNTT NKR  G  + +
Subjt:  RNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS

Q8W191 Transcription factor HY5-like1.1e-1444.9Show/hide
Query:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ
        +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+              +   S + R RGR+  +KE + LKRLLRNRVSAQQ
Subjt:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ

Query:  ARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT
        ARERKKVY+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  ARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT

Q9SM50 Transcription factor HY54.2e-3062.09Show/hide
Query:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV------GISAPGKA-PASDSVRSRGRSAAEKESKRLKRLLRNR
        MQ +A S+   S + SSSERSSSSA   ++KE  G ESD +EI RVP++ G +  T       G+SA G+A P++ + R RGRS A+KE+KRLKRLLRNR
Subjt:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV------GISAPGKA-PASDSVRSRGRSAAEKESKRLKRLLRNR

Query:  VSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTT
        VSAQQARERKK YL +LE R   LE KN+ELEE+LSTLQNENQMLRHILKNTT
Subjt:  VSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTT

Arabidopsis top hitse value%identityAlignment
AT3G17609.1 HY5-homolog5.4e-1765.38Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.2 HY5-homolog7.8e-1644.9Show/hide
Query:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ
        +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+              +   S + R RGR+  +KE + LKRLLRNRVSAQQ
Subjt:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ

Query:  ARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT
        ARERKKVY+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  ARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.3 HY5-homolog5.4e-1765.38Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.4 HY5-homolog5.4e-1765.38Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKKVY+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNT

AT5G11260.1 Basic-leucine zipper (bZIP) transcription factor family protein1.9e-3361.31Show/hide
Query:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG----------NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLL
        MQ +A S+   S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G           SGS  G     +A   +S R RGR+ AEKE+KRLKRLL
Subjt:  MQGRA-SAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG----------NSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLL

Query:  RNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS
        RNRVSAQQARERKK YLSELE R  +LE KNSELEE+LSTLQNENQMLRHILKNTT NKR  G  + +
Subjt:  RNRVSAQQARERKKVYLSELEERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGGACGAGCCTCCGCCGCCACCGTCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAG
TGATGAGGAGGAGATAAGTAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACAGTCGGCATTTCAGCGCCAGGTAAAGCGCCTGCATCAGATAGCGTAAGGAGCAGAG
GACGAAGTGCGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAA
GAAAGGGCAACAAATTTGGAGAAGAAGAATTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAAAATGAGAATCAAATGCTTAGACACATACTAAAGAACACAACAACCAA
CAAGAGAAGTGATGGCGACGCTGCTAAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGGACGAGCCTCCGCCGCCACCGTCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAG
TGATGAGGAGGAGATAAGTAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACAGTCGGCATTTCAGCGCCAGGTAAAGCGCCTGCATCAGATAGCGTAAGGAGCAGAG
GACGAAGTGCGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGTGTACTTAAGCGAGTTGGAA
GAAAGGGCAACAAATTTGGAGAAGAAGAATTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAAAATGAGAATCAAATGCTTAGACACATACTAAAGAACACAACAACCAA
CAAGAGAAGTGATGGCGACGCTGCTAAATCCTAA
Protein sequenceShow/hide protein sequence
MQGRASAATVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVGISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKVYLSELE
ERATNLEKKNSELEEKLSTLQNENQMLRHILKNTTTNKRSDGDAAKS