; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G12949 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G12949
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationctg1838:7659692..7664681
RNA-Seq ExpressionCucsat.G12949
SyntenyCucsat.G12949
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]6.32e-16785.66Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS SGFTSSQT DSSSAK+RE+PGL+P TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ        NL G GSTQ Q+SDSIVKTP+QNGS+GY T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_004136317.1 replication protein A 32 kDa subunit A [Cucumis sativus]1.97e-18697.13Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ        NLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_008466326.1 PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]4.25e-18193.91Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDS SGFTSSQTNDSSSAKSRESPGL+PVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ        NLKG+GSTQLQTSDSIVKTPVQNGS+GYHTT
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]9.39e-16986.38Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS SGFTSSQTNDSSSAK+RE+PGL+P TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ        NL G GSTQ Q+SDSIVKTP+QNGS+GY T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]1.77e-17389.96Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFS TQFDSASGFTSSQTNDSSSAKSRESPGL+PVTVKQISEASHSGEEKANFV+NGVDITNV IVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ        NL G+G TQ Q+SDSIVKTPVQNGS+G+ T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein9.53e-18797.13Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ        NLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like2.06e-18193.91Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSSTQFDS SGFTSSQTNDSSSAKSRESPGL+PVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQ        NLKG+GSTQLQTSDSIVKTPVQNGS+GYHTT
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A2.15e-15381.72Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS SGFTSSQ  DS+SAKSRESPGL+PVTVKQISEA HSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QM++IQDGMY+RVNGHLK+FQ N QIFAFSVRPVTN DEITFHFIECIHD+LRNSKLQ         L G  STQ Q+SDS V   VQ+GS+GY T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS + S QHTVDVKK+ D+LVLDYLQLPSSVAKE+GIH+DELSQQLK+P+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like4.55e-16986.38Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS SGFTSSQTNDSSSAK+RE+PGL+P TVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ        NL G GSTQ Q+SDSIVKTP+QNGS+GY T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like1.56e-16585.05Show/hide
Query:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF
        MFSS+QFDS SGFT SQTNDSSSAK+RE+PGL+P TVKQISEASHSGEEKANF INGVDITNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTF
Subjt:  MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTF

Query:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT
        DT QM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ        NL G GSTQ Q+SDSIVKTP+QNGS+GY T 
Subjt:  DTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTT

Query:  SSA--IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SS   +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SSA--IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C2.7e-2439.63Show/hide
Query:  SASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN
        SA+G  ++     S  +     G +P TV  IS +     +  G     F I+GV+ TNV ++G+V     R+TD+ FT+DD TG I   RW+ D  DT 
Subjt:  SASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEA-----SHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN

Query:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQVLVP
            IQ+G+YV+V  +L  FQ+ KQ  A S+RP+ NF+E+  HFIEC+H HL +  SK+Q  +P
Subjt:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRN--SKLQVLVP

Q6H7J5 Replication protein A 32 kDa subunit B3.8e-4236.92Show/hide
Query:  GFTSSQTNDSSSA---------KSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDT
        GF  SQ  +++           KSR +  L+P+TVKQI +AS + ++K+NF +NG++++ V +VG++  K +R TD++FT+DDGTG +   RW ND+ DT
Subjt:  GFTSSQTNDSSSA---------KSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDT

Query:  NQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQT--SDSIV--KTPVQNGSNGYH
         +M +IQ+G YV VNG LK FQ  +Q+ A+SVR +TNF+++T HF+ C+H HL  ++     P + +N      T  QT   DS+   ++P+ N      
Subjt:  NQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQT--SDSIV--KTPVQNGSNGYH

Query:  TTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKS
          +S   + Q+T       D LVL+    P+ +  + G+  D +S++L LP E +   I    D G +Y+TID+ H+KS
Subjt:  TTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A9.3e-4941.81Show/hide
Query:  FSSTQFDSASGFTSSQ---TNDSSSAKSRESPGLIPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRW
        FS     S S FTSSQ    + ++ +KSR +   +P+TVKQISEA  S   GE+ A FV++GV+  NV +VG VS K ERNTD++FT+DDGTG +   RW
Subjt:  FSSTQFDSASGFTSSQ---TNDSSSAKSRESPGLIPVTVKQISEASHS---GEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRW

Query:  VNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKG----NGSTQLQTSDSIVKTPVQ
        VND  D+ +   +Q+GMYV V G LK  Q  K+  AF++RPVT+++E+T HFI+C+  HL N+K Q+  P    +  G    NG +++ T  S+   P  
Subjt:  VNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKG----NGSTQLQTSDSIVKTPVQ

Query:  NGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA
                     P    T   K   +  VL+  + P++V  E G+H DE+ ++ +LP  KI  +I  L D G IYSTIDE H+KSA
Subjt:  NGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA

Q8LFJ8 Replication protein A 32 kDa subunit B2.8e-4538.77Show/hide
Query:  SASGFTSSQT-----NDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN
        +  GF  SQ        SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T 
Subjt:  SASGFTSSQT-----NDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN

Query:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSA
        +ME ++ GMYVR++GHLK+FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+    G  +  +   + + Q   S + TP +    G    S+ 
Subjt:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSA

Query:  IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         P++ +  D      + VL+YL  P  +  E G+H D ++++L++P+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A7.8e-6446.37Show/hide
Query:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S  GF SSQ      + SS+AK+R+  GL+PVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP
        I CKRWV++TFD  +ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q                Q+      V T 
Subjt:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP

Query:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK
         Q GSN    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLK+P  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A25.6e-6546.37Show/hide
Query:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S  GF SSQ      + SS+AK+R+  GL+PVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP
        I CKRWV++TFD  +ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q                Q+      V T 
Subjt:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP

Query:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK
         Q GSN    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLK+P  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A25.6e-6546.37Show/hide
Query:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT
        MFSS+QF+     S  GF SSQ      + SS+AK+R+  GL+PVTVKQI+E   S  EK+  VING+ +TNV++VG V +K E + T++ FT+DDGTG 
Subjt:  MFSSTQFD-----SASGFTSSQ-----TNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAE-RNTDITFTVDDGTGT

Query:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP
        I CKRWV++TFD  +ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH+IECIH + +NS+ Q                Q+      V T 
Subjt:  IGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTP

Query:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK
         Q GSN    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLK+P  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  VQNGSNGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA322.0e-4638.77Show/hide
Query:  SASGFTSSQT-----NDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN
        +  GF  SQ        SSS K+R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T 
Subjt:  SASGFTSSQT-----NDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTN

Query:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSA
        +ME ++ GMYVR++GHLK+FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+    G  +  +   + + Q   S + TP +    G    S+ 
Subjt:  QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSA

Query:  IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
         P++ +  D      + VL+YL  P  +  E G+H D ++++L++P+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  IPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA323.4e-4639.15Show/hide
Query:  SSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLK
        SS ++R+   L+P+T+KQ+S AS +GE  +NF I+GVDI  V IVG++S    R T + F VDDGTG + C RW +   +T +ME ++ GMYVR++GHLK
Subjt:  SSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVNGHLK

Query:  MFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELV
        +FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+    G  +  +   + + Q   S + TP +    G    S+  P++ +  D      + V
Subjt:  MFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELV

Query:  LDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        L+YL  P  +  E G+H D ++++L++P+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  LDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGTACCCAGTTTGATTCCGCCAGCGGATTTACGTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGAGTCGAGAATCCCCGGGCTTGATTCCGGTAACTGT
GAAACAGATCAGCGAAGCTTCACATTCTGGTGAAGAGAAGGCCAACTTTGTAATCAATGGGGTTGATATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACGGATATCACATTCACGGTAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAACCAAATGGAGGAAATACAAGAT
GGAATGTACGTTCGGGTGAATGGGCATTTGAAAATGTTCCAAAGCAATAAGCAAATATTTGCATTCTCCGTAAGGCCTGTTACGAACTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACACGACCACTTGCGGAACTCCAAGTTACAGGTACTAGTTCCTGGAGCTGACTTGAATCTCAAAGGCAATGGATCAACACAGCTCCAAACCTCAGATT
CAATTGTGAAGACTCCAGTGCAGAATGGCTCGAATGGATATCATACAACTTCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTG
GTTCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAAAGATGAACTTTCCCAACAACTGAAACTTCCAATGGAGAAAATACTGGATTCCAT
AAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCCAGTACCCAGTTTGATTCCGCCAGCGGATTTACGTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGAGTCGAGAATCCCCGGGCTTGATTCCGGTAACTGT
GAAACAGATCAGCGAAGCTTCACATTCTGGTGAAGAGAAGGCCAACTTTGTAATCAATGGGGTTGATATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTG
AAAGGAATACGGATATCACATTCACGGTAGATGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAACCAAATGGAGGAAATACAAGAT
GGAATGTACGTTCGGGTGAATGGGCATTTGAAAATGTTCCAAAGCAATAAGCAAATATTTGCATTCTCCGTAAGGCCTGTTACGAACTTTGATGAAATTACCTTCCACTT
TATTGAATGCATACACGACCACTTGCGGAACTCCAAGTTACAGGTACTAGTTCCTGGAGCTGACTTGAATCTCAAAGGCAATGGATCAACACAGCTCCAAACCTCAGATT
CAATTGTGAAGACTCCAGTGCAGAATGGCTCGAATGGATATCATACAACTTCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTG
GTTCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAAAGATGAACTTTCCCAACAACTGAAACTTCCAATGGAGAAAATACTGGATTCCAT
AAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
Protein sequenceShow/hide protein sequence
MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQD
GMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQVLVPGADLNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDEL
VLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA