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Cucsat.G1297 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1297
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1:11047705..11050415
RNA-Seq ExpressionCucsat.G1297
SyntenyCucsat.G1297
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049530.1 hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa]4.25e-3983.87Show/hide
Query:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
        MNPDNNPNNSRSSAFDPA+TTGGIQP   AEKNPNSKA+TA   ATAASNN+GKALAERAVYG+QQRRTGRRRRNLIHEHGA RLLP  +SR+
Subjt:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
KAG6597562.1 hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia]1.96e-0851.02Show/hide
Query:  SSAFDPAAT---TG--GIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRMPVMGEDDLAES
        S  FDPA T   TG  G QP TK EKNP+SKA        AAS+NVGKALA RAVYG+Q+R TGRRR N +H     RLLP  +S++ +      ++S
Subjt:  SSAFDPAAT---TG--GIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRMPVMGEDDLAES
KGN57150.1 hypothetical protein Csa_011148 [Cucumis sativus]4.55e-4994.62Show/hide
Query:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
        MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLP  +S++
Subjt:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
TrEMBL top hitse value%identityAlignment
A0A0A0L5C0 Uncharacterized protein2.20e-4994.62Show/hide
Query:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
        MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLP  +S++
Subjt:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
A0A5A7U2I2 Uncharacterized protein2.06e-3983.87Show/hide
Query:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
        MNPDNNPNNSRSSAFDPA+TTGGIQP   AEKNPNSKA+TA   ATAASNN+GKALAERAVYG+QQRRTGRRRRNLIHEHGA RLLP  +SR+
Subjt:  MNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMSRM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTCCTACCAACCAACTCCCAGCAAAATTAACAACACCGCACCAAATAATTATAATGAATCCTGACAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGC
CGCCACGACCGGCGGAATTCAACCGCCAACGAAGGCAGAGAAAAACCCAAACTCAAAAGCTTCCACTGCCACTGCCACCGCCACCGCGGCCTCCAATAACGTGGGGAAGG
CTTTGGCAGAGAGAGCAGTTTATGGATCCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGCGCCACTCGGTTGCTTCCAAGAGTAATGTCA
AGGATGCCAGTTATGGGTGAAGACGACTTAGCAGAAAGTCGTGTCATTGTGTAG
mRNA sequenceShow/hide mRNA sequence
CTTCTTCCTACCAACCAACTCCCAGCAAAATTAACAACACCGCACCAAATAATTATAATGAATCCTGACAATAATCCCAATAACTCCAGATCATCAGCTTTTGATCCGGC
CGCCACGACCGGCGGAATTCAACCGCCAACGAAGGCAGAGAAAAACCCAAACTCAAAAGCTTCCACTGCCACTGCCACCGCCACCGCGGCCTCCAATAACGTGGGGAAGG
CTTTGGCAGAGAGAGCAGTTTATGGATCCCAACAGCGGCGGACAGGAAGAAGAAGAAGAAACCTCATCCATGAACATGGCGCCACTCGGTTGCTTCCAAGAGTAATGTCA
AGGATGCCAGTTATGGGTGAAGACGACTTAGCAGAAAGTCGTGTCATTGTGTAG
Protein sequenceShow/hide protein sequence
LLPTNQLPAKLTTPHQIIIMNPDNNPNNSRSSAFDPAATTGGIQPPTKAEKNPNSKASTATATATAASNNVGKALAERAVYGSQQRRTGRRRRNLIHEHGATRLLPRVMS
RMPVMGEDDLAESRVIV