CuGenDBv2

Gene ID	Cucsat.G12979
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	t-SNARE coiled-coil homology domain-containing protein
Genome location	ctg1838:8309114..8312689
RNA-Seq Expression	Cucsat.G12979
Synteny	Cucsat.G12979
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0015031 - protein transport (biological process) GO:0005634 - nucleus (cellular component) GO:0030173 - integral component of Golgi membrane (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein IPR039899 - BET1, SNARE domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136265.1 bet1-like protein At1g29060 [Cucumis sativus]

9.42e-87

100

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_008466185.1 PREDICTED: bet1-like protein At1g29060 [Cucumis melo]

3.69e-84

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_022940948.1 bet1-like protein At1g29060 [Cucurbita moschata]

4.14e-81

93.38

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_022980898.1 bet1-like protein At1g29060 [Cucurbita maxima]

1.19e-80

92.65

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

XP_038896659.1 bet1-like protein At1g29060 [Benincasa hispida]

1.44e-81

94.85

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYN +AA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SR+
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHL4 t-SNARE coiled-coil homology domain-containing protein

4.56e-87

100

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A1S3CQM7 bet1-like protein At1g29060

1.79e-84

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A5A7TAQ3 Bet1-like protein

1.79e-84

97.06

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MASSSFRGGSSFYNGDAA FRSREGLSTRPAA+SDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHV+QVVVFALICFFIVYMW+KMSRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A6J1FQQ6 bet1-like protein At1g29060

2.00e-81

93.38

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRPAA+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

A0A6J1J0M1 bet1-like protein At1g29060

5.74e-81

92.65

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+S+RGGSSFYNGDAA +RSREGLSTRP+A+SDEIQLQIDPMQGDLDD+IVGLH QVKRLRNIAQ+IGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LNKKIIQNGSNHVVQVVVFALICFFIVYMWSK+SRK
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

SwissProt top hits

e value

%identity

Alignment

Q8L9S0 Bet1-like protein At1g29060

1.3e-43

66.18

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Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSKM ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Q8VXX9 Bet1-like protein At4g14600

3.7e-43

65.22

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Query:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSKM ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Arabidopsis top hits

e value

%identity

Alignment

AT1G29060.1 Target SNARE coiled-coil domain protein

9.1e-45

66.18

Show/hide

Query:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR
        MAS+   GGS +  G A  +RSREGLSTR A+ S+EIQL+IDPM  DLDDEI+GLH QV++L+NIAQ+IG+EAKSQ+DFLD+LQMTLI+AQAGVKNN+R+
Subjt:  MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRR

Query:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        LN  II++G+NH++ VV+FAL+ FFI+YMWSKM ++
Subjt:  LNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

AT4G14600.1 Target SNARE coiled-coil domain protein

2.6e-44

65.22

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Query:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV
        MAS+  R G+  S Y G AA +RSREGLSTR AA S+EIQL+IDPM  DLDDEI GLH QV++L+NIAQ+IG+EAK Q+DFLD+LQMTLI+AQAGVKNN+
Subjt:  MASSSFRGGS--SFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNV

Query:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK
        R+LN  II++G+NH++ VV+FAL+ FF++Y+WSKM ++
Subjt:  RRLNKKIIQNGSNHVVQVVVFALICFFIVYMWSKMSRK

Sequences

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CDS sequence

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ATGGCGTCCAGTTCGTTTCGTGGCGGTAGTTCCTTCTACAATGGCGACGCCGCCCATTTTCGCTCCAGGGAGGGGCTTAGCACAAGACCGGCGGCTTCTTCCGATGAAAT
TCAACTGCAGATCGATCCGATGCAAGGGGACTTGGACGACGAGATCGTTGGTCTCCACAGCCAAGTTAAAAGGCTTAGAAACATTGCTCAAGACATTGGGACAGAAGCAA
AGTCTCAGCAAGATTTTCTAGATCAGTTGCAAATGACATTGATAAAAGCTCAAGCGGGGGTGAAGAACAATGTAAGAAGATTGAACAAAAAGATCATACAGAATGGATCA
AATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATACATGTGGTCGAAAATGTCCAGAAAATGA

mRNA sequence

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Protein sequence

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MASSSFRGGSSFYNGDAAHFRSREGLSTRPAASSDEIQLQIDPMQGDLDDEIVGLHSQVKRLRNIAQDIGTEAKSQQDFLDQLQMTLIKAQAGVKNNVRRLNKKIIQNGS
NHVVQVVVFALICFFIVYMWSKMSRK

Cucsat.G12979 (gene) of Cucumber (B10) v3 genome