CuGenDBv2

Gene ID	Cucsat.G13
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	ctg1:230648..234596
RNA-Seq Expression	Cucsat.G13
Synteny	Cucsat.G13
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596276.1 hypothetical protein SDJN03_09456, partial [Cucurbita argyrosperma subsp. sororia]

2.39e-102

88.57

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IFFIVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

XP_004146176.1 uncharacterized protein LOC101204142 [Cucumis sativus]

2.42e-118

100

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

2.64e-111

93.3

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Query:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        +EME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        SYGLYSQVLL+SKVII+IVLVCWFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Subjt:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

XP_023539852.1 uncharacterized protein LOC111800404 [Cucurbita pepo subsp. pepo]

4.81e-102

88.57

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+KEIK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

XP_038904813.1 uncharacterized protein LOC120091071 [Benincasa hispida]

6.83e-102

87.01

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E I+E++SSIAAPFIF IVIGFQFLAKWLEHLKK GSNSQ+EMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNK++KTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLY +VLL+SKV I+I+LVCWFWR SVATVP HLVQPFGKFLSWR GGTVND VKVGI+PWLILSTRVSKFV RVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

1.17e-118

100

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

A0A1S3BKE1 uncharacterized protein LOC103490650

1.28e-111

93.3

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Query:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        +EME EGIVEH SSIAAPFIFFIVIGFQFLA+WLEHLKK GSNSQVE+ELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        SYGLYSQVLL+SKVII+IVLVCWFWRASVATVPHHLVQPFGKFLSW+AGGTVNDYVKVGIIPWLILSTRVSKFV +VVK
Subjt:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

A0A6J1E9M6 uncharacterized protein LOC111431128

2.04e-101

85.47

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Query:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        +E E EGIVEHRSSIAAP IF +VI FQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  LEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
        SYGLYS+VLL+SKV ++I L+ WFWR SVATVPHHLVQPFG+ LSW+AGG VNDYVKVGIIPWLILSTRVSKFV +VV+
Subjt:  SYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

A0A6J1G1T6 uncharacterized protein LOC111449636

9.46e-102

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRR AAAKEKELANYQESR+K+IK+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGGTVNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

A0A6J1I7A9 uncharacterized protein LOC111470261

1.34e-101

87.43

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E IVEHR+SI AP IF IVI FQFLA WL+HLKKRGSN+QVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV
        GLYS+VLL+SKV+I+IVLVCWFWRASVATVPHHLVQPFG+FLSWRAGG VNDYVKVGIIPWLILSTRVSKFV RV
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRV

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

1.4e-50

59.32

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Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
         +Y + LL SKV+I+++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

9.9e-52

59.32

Show/hide

Query:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY
        ME E ++E R  +AAP  F +V+ FQ L+KWL+ LKK+GS +  E ELR  IKQLL+EAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY
Subjt:  MEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLKEASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSY

Query:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK
         +Y + LL SKV+I+++LV  FWR  +A +   LVQPFG  LSW  GG +  +V VGIIPWLILS RVSK+V R V+
Subjt:  GLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTRVSKFVFRVVK

Sequences

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CDS sequence

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TTTCGTAACTTAGTTCCTTTTTCTAAGATATTTGGAATTGAAAACGCAGCGTTTGGATTCTCCACGAACTGGGCTGGGCTTTTGGGTTTTTTTGGGCCTTGGATTTTGAG
ACCTCTTATTTCAAGCCCCTCCTTTGTTGATATTCAAAATTCTCTGGAAATGGAACCGGAAGGAATCGTAGAGCATCGAAGCTCCATTGCCGCTCCATTCATTTTCTTTA
TCGTTATCGGTTTTCAGTTTCTCGCTAAATGGCTGGAGCACCTGAAGAAGAGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAAG
GAGGCTAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTATCAAGAATCACGTAATAA
GGAGATCAAGACGTCATATGGTTTATATAGTCAAGTACTGTTGGTATCGAAGGTTATTATACATATTGTGCTGGTTTGCTGGTTTTGGAGAGCTTCTGTTGCTACTGTAC
CTCATCACCTTGTGCAGCCATTTGGAAAGTTTTTATCTTGGAGGGCTGGAGGTACCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCCACAAGG
GTTAGCAAGTTTGTATTTCGAGTGGTGAAGTAA

mRNA sequence

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Protein sequence

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FRNLVPFSKIFGIENAAFGFSTNWAGLLGFFGPWILRPLISSPSFVDIQNSLEMEPEGIVEHRSSIAAPFIFFIVIGFQFLAKWLEHLKKRGSNSQVEMELRKSIKQLLK
EASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSQVLLVSKVIIHIVLVCWFWRASVATVPHHLVQPFGKFLSWRAGGTVNDYVKVGIIPWLILSTR
VSKFVFRVVK

Cucsat.G13 (gene) of Cucumber (B10) v3 genome