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Cucsat.G13158 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13158
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description11 kDa late embryogenesis abundant protein-like
Genome locationctg1838:1296424..1297601
RNA-Seq ExpressionCucsat.G13158
SyntenyCucsat.G13158
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25405.1 18 kDa seed maturation protein [Cucumis melo var. makuwa]6.26e-4691.4Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT
        MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQEA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT

XP_022940345.1 11 kDa late embryogenesis abundant protein-like [Cucurbita moschata]8.10e-4075Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL------GTGTH
        MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+  AELDKQQAR EHA ERQ  +  G  TGL      GTGT 
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL------GTGTH

Query:  TYDPTVGG
         YDPTVGG
Subjt:  TYDPTVGG

XP_022971427.1 11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]4.33e-4178.85Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDP
        MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+  AELDKQQAR EHAAERQ  +  G  TGL  GTGT  YDP
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDP

Query:  TVGG
        TVGG
Subjt:  TVGG

XP_031737964.1 11 kDa late embryogenesis abundant protein-like [Cucumis sativus]2.75e-59100Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV
        MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV

Query:  GGR
        GGR
Subjt:  GGR

XP_038905932.1 11 kDa late embryogenesis abundant protein-like [Benincasa hispida]1.30e-4986.92Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT------H
        MQSGRNAAEA KESAANVGASAKAGMEK KA+AQEKVDKMRAHDP EKDMARERK+ERIQEAELDKQQAR EHAA+RQTGTGPGTR GLGTGT      H
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT------H

Query:  TYDPTVG
        TYDPTVG
Subjt:  TYDPTVG

TrEMBL top hitse value%identityAlignment
A0A0A0LBV1 Uncharacterized protein1.33e-59100Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV
        MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTV

Query:  GGR
        GGR
Subjt:  GGR

A0A5D3DPJ3 18 kDa seed maturation protein3.03e-4691.4Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT
        MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQEA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGT

A0A6J1DVT9 11 kDa late embryogenesis abundant protein-like6.64e-3575.49Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHT-YDPT
        MQSGRNAAE+ KESAANVGA+A+AGM+KTKATAQEKVDKMRAHDP EKDMA  RK+ERI EAE++KQQAR  HAAERQ GTG  T  GL TGT T   PT
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHT-YDPT

Query:  VG
         G
Subjt:  VG

A0A6J1FQA5 11 kDa late embryogenesis abundant protein-like3.92e-4075Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL------GTGTH
        MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+  AELDKQQAR EHA ERQ  +  G  TGL      GTGT 
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL------GTGTH

Query:  TYDPTVGG
         YDPTVGG
Subjt:  TYDPTVGG

A0A6J1I1X4 11 kDa late embryogenesis abundant protein-like2.10e-4178.85Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDP
        MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+  AELDKQQAR EHAAERQ  +  G  TGL  GTGT  YDP
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDP

Query:  TVGG
        TVGG
Subjt:  TVGG

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1132.4e-1050.56Show/hide
Query:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG
        +S  +  ASAKAGMEK KA+ QEKVD+M+  DP EK+MARERK+ER ++AEL KQ+AR  +A     G G    TG  T  +    T G
Subjt:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG

P46515 11 kDa late embryogenesis abundant protein1.8e-2161.62Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT
        MQSG+NAA + KE+AANV ASAKAGMEKTKA+ QEK +KM AHDP +K+MARE+K+ER  EAE +KQ A+  +AA++QT       TG+GTGTH+Y  T
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT

Q00747 Protein LE256.3e-1148.98Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQ--TGTGPGTRTGLG-TGTHT
        MQ+G++AA A           AKAGMEKTKA  QEK ++M   DP +K+MA E+K++R+  AE+ K+ A+ +HAAE+Q    TG GT TG G TG HT
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQ--TGTGPGTRTGLG-TGTHT

Q01417 18 kDa seed maturation protein1.6e-1751.43Show/hide
Query:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPG------TRTGLGTGTH
        MQ G+ A E++KE+A N+GASAKAGMEKTKAT QEK ++M A DP +K++A ++K+ ++ +AELDKQ AR  + A +Q+ T  G        TG GTGT 
Subjt:  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPG------TRTGLGTGTH

Query:  TYDPT
        TY  T
Subjt:  TYDPT

Q9FG31 Late embryogenesis abundant protein 462.3e-1347.31Show/hide
Query:  EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG
        ++MKE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K MA + K+++I +AE+ K++ R +H A  +   G GT  GLGT TH+    VG
Subjt:  EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-51.7e-1447.31Show/hide
Query:  EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG
        ++MKE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K MA + K+++I +AE+ K++ R +H A  +   G GT  GLGT TH+    VG
Subjt:  EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGT
GGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACG
CAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACCGTGGGGGGCCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGT
GGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACG
CAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACCGTGGGGGGCCGCTAA
Protein sequenceShow/hide protein sequence
MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR