; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1317 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1317
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionsignal recognition particle 19 kDa protein
Genome locationctg1:11456305..11459373
RNA-Seq ExpressionCucsat.G1317
SyntenyCucsat.G1317
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]2.07e-89100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]1.20e-8898.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_022955603.1 signal recognition particle 19 kDa protein [Cucurbita moschata]9.48e-8696.27Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_022979984.1 signal recognition particle 19 kDa protein [Cucurbita maxima]6.68e-8697.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]9.87e-8898.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein9.75e-89100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein5.81e-8998.51Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDG LSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein9.59e-8696.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK
        AELVPRHPGRTKKQEPASSSTAGPSK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSK-GKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein4.59e-8696.27Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein3.23e-8697.01Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSTAGPSKGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein1.1e-2350.38Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

P49964 Signal recognition particle 19 kDa protein8.2e-5174.22Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPR
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRVQLKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSTAGPSKGKGGRKKK
        H GRTKKQEPA+SSTAG SKGKGG+KKK
Subjt:  HPGRTKKQEPASSSTAGPSKGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein1.1e-2350.38Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSST---AGPSKGKGGRKK
        +   RT+K   A  S     G  KGKG +KK
Subjt:  RHPGRTKKQEPASSST---AGPSKGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein1.2e-4969.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein5.0e-2449.62Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRVQLK+EDG+L      SRK +ML +AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK
        +   RT+K    +P      G  KGKG +KK
Subjt:  RHPGRTKKQ---EPASSSTAGPSKGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative8.4e-5169.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRVQLK+EDG L NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRTKKQE---------PASSSTAGPS--KGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATTAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTG
TGAGAATCCTACGTGTGCTGAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCAGCTGAAGAAGGAGGATGGAGCTCTCTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ACTAAGAAGCAGGAGCCAGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTGTTGTATCCCATTTATATTAATTCAAAGAAAACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCTTG
TGAGAATCCTACGTGTGCTGAGATTGGAGATTGCTGCAGTCATCTCAAACTTCCCTTTGCCATTGAGATTGATAAAGCATATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCAGCTGAAGAAGGAGGATGGAGCTCTCTCCAATCCAGCTATTACTTCCAGAAAACAACTTATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ACTAAGAAGCAGGAGCCAGCATCCTCATCAACAGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAG
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVQLKKEDGALSNPAITSRKQLMLRIAELVPRHPGR
TKKQEPASSSTAGPSKGKGGRKKK