; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13298 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13298
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationctg1838:4086035..4089232
RNA-Seq ExpressionCucsat.G13298
SyntenyCucsat.G13298
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057248.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa]2.79e-25897.14Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE-DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE-DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE

Query:  MAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        MAGSQVEIKKAEPKKANPPPAPSKR+H+SRPSYSGAYG DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
Subjt:  MAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        YGASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYA SYDMGMGTGYAAGGRGSFYGSRGGGGG   YDGAGSAPSGRYHPYGR
Subjt:  YGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

KGN59707.1 hypothetical protein Csa_002190 [Cucumis sativus]1.36e-270100Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

XP_016903287.1 PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]3.99e-26097.4Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKR+H+SRPSYSGAYG DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYA SYDMGMGTGYAAGGRGSFYGSRGGGGG   YDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]1.31e-25694.1Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-------YDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  AP+TGGYAGSYDMG+GTGY +GGRGSFYGSRGGGGGGGG       YDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-------YDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]1.72e-25694.33Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-----YDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  AP+TGGYAGSYDMG+GTGY +GGRGSFYGSRGGGGGGGG     YDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-----YDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein6.58e-271100Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 11.93e-26097.4Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKR+H+SRPSYSGAYG DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYA SYDMGMGTGYAAGGRGSFYGSRGGGGG   YDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

A0A5A7UQ58 Heterogeneous nuclear ribonucleoprotein 11.35e-25897.14Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE-DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDE-DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE

Query:  MAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
        MAGSQVEIKKAEPKKANPPPAPSKR+H+SRPSYSGAYG DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR
Subjt:  MAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR

Query:  YGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        YGASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYA SYDMGMGTGYAAGGRGSFYGSRGGGGG   YDGAGSAPSGRYHPYGR
Subjt:  YGASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 11.93e-26097.4Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPNDVATNGEH+DAKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKR+H+SRPSYSGAYG DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYG-DAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYA SYDMGMGTGYAAGGRGSFYGSRGGGGG   YDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 16.33e-25794.1Show/hide
Query:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND ATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-------YDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  AP+TGGYAGSYDMG+GTGY +GGRGSFYGSRGGGGGGGG       YDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGG-------YDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A14.6e-3037.28Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF  +G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEF
          +E   RD+F QYG ++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      ++ G  G  +G  
Subjt:  SVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEF

Query:  GGGGYGGSFRAGGPYGAR--GGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPSTGGYAGSY
           G GG+F   G +G    GGGYGG G   N F   G YG GG G        G S  YG S  +GY  +G GYGG   SY +YN+GG    GG +GS 
Subjt:  GGGGYGGSFRAGGPYGAR--GGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPSTGGYAGSY

Query:  DMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSG
        + G G  Y   G  +   S  G   GG + G  S P G
Subjt:  DMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSG

P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog5.4e-3136.75Show/hide
Query:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK
        HG+     K+F+GGL   TT     +HF  +GEI D V+MKD KT   RGFGF+TY+   +VD       H ++G+ VE KR +P+      +     KK
Subjt:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK

Query:  IFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGA
        +FVGGI   ++E++ RD+F QYG V    I+ D  T + RGF F+ F+    VD +  + N  ++ G  +++KKA PK      AP  R    R    G 
Subjt:  IFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRPSYSGA

Query:  YGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGY--------GGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGG
         G  +G  G G +GGS   GG     GGG+GG         GG D  G G  G GG   +     MG   RYG    R     GG+     S   YNSG 
Subjt:  YGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGY--------GGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGG

Query:  APSTGGYAGSYDMGMGTGYAAGGRG---------SFYGSRGGGGGGGGYDG
         P + G+ G Y    G G   G  G         S  GSRGGGGGG G  G
Subjt:  APSTGGYAGSYDMGMGTGYAAGGRG---------SFYGSRGGGGGGGGYDG

P51968 Heterogeneous nuclear ribonucleoprotein A3 homolog 19.2e-3134.96Show/hide
Query:  DGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGSSS-
        D   HDP    +     K+F+GGL  ETT     +HF  +G++TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S+ 
Subjt:  DGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGSSS-

Query:  -SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSK---
               KKIFVGGI    +E   RD+   YG ++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     +  +   
Subjt:  -SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSK---

Query:  ----RFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR-YGASFSRGYDFRGGYGGPDE
             F     +Y G  G  +G  GGGG+G     GG  G  GGGYGG GG+ ++G+G    G  G Y   P  GY  R YG S   G +  GGYGG   
Subjt:  ----RFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSAR-YGASFSRGYDFRGGYGGPDE

Query:  SYGAYNSGGAPSTGGY------------------AGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDG
         Y  YN  G    G Y                   GS+      G  +G  G  YGS GGGGGGG Y G
Subjt:  SYGAYNSGGAPSTGGY------------------AGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDG

P51991 Heterogeneous nuclear ribonucleoprotein A31.5e-2836.04Show/hide
Query:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRP
           KKIFVGGI    +E   RD+F +YG ++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSRP

Query:  SYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYG---------
          SG +    G FGGG  GG+F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG    YG         
Subjt:  SYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYG---------

Query:  ----AYNSGGAPSTGGYA--------GSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRY
             YN GG    G Y         G+Y     + Y     GSF G   G   GGGY   G   SG Y
Subjt:  ----AYNSGGAPSTGGYA--------GSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRY

Q8W034 Heterogeneous nuclear ribonucleoprotein 15.4e-3937.16Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRFHDSRPSYSG-----------AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG
           + +  +  SY G           + G+    +G  GYG    AG   G+ G GYG YGG      GYG   T G GA    P  GY +  G +    
Subjt:  APSKRFHDSRPSYSG-----------AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG

Query:  YD--FRGGYGGPDESYGAYNS-----GGAPST-------------GGYAGSYDMGMGTGYA---AGGRGSFYGSRGGGGGG--GGYDGAGSAPSGRYHPY
        +D     GYG P    GA +S     G AP T             GGY+GS D G G   A    GGR S  GS   G GG  GG  G GS  S     Y
Subjt:  YD--FRGGYGGPDESYGAYNS-----GGAPST-------------GGYAGSYDMGMGTGYA---AGGRGSFYGSRGGGGGG--GGYDGAGSAPSGRYHPY

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-5141.19Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG +GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRFHDSRPSYSGA
        G+P  ++EDE +++F  YG + EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E+   QVEIK+AEPK+     +     +   +D   SYSG 
Subjt:  GIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRFHDSRPSYSGA

Query:  YGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGP--DESYGAYNSGGAPSTG
          + Y  +   GYGG            GGYG Y GN   +  G YG GG                      GY +  GYGG   +  YGA         G
Subjt:  YGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGP--DESYGAYNSGGAPSTG

Query:  GYAGSYDMGMGTGYAAG---GRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPY
        GY+    MG G G AA    G G  +G+   G   G  +G   +   RYHPY
Subjt:  GYAGSYDMGMGTGYAAG---GRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.7e-6967.78Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-8454.4Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRFHDSR

Query:  PSYSGAYGDAYGEFGG--GGYG---GSFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES
         S + +Y    G +GG  GGYG   G  R+ GGP     GGYG   G  G +F  GY  YG G +G YR +P +GYS+R+G  +  G+   G   G + +
Subjt:  PSYSGAYGDAYGEFGG--GGYG---GSFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES

Query:  YGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR
        Y  Y  GG    GGY G    G G  Y +GG G  Y       G GG  G G + S RYHPY R
Subjt:  YGAYNSGGAPSTGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.8e-4037.16Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRFHDSRPSYSG-----------AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG
           + +  +  SY G           + G+    +G  GYG    AG   G+ G GYG YGG      GYG   T G GA    P  GY +  G +    
Subjt:  APSKRFHDSRPSYSG-----------AYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGG--NDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRG

Query:  YD--FRGGYGGPDESYGAYNS-----GGAPST-------------GGYAGSYDMGMGTGYA---AGGRGSFYGSRGGGGGG--GGYDGAGSAPSGRYHPY
        +D     GYG P    GA +S     G AP T             GGY+GS D G G   A    GGR S  GS   G GG  GG  G GS  S     Y
Subjt:  YD--FRGGYGGPDESYGAYNS-----GGAPST-------------GGYAGSYDMGMGTGYA---AGGRGSFYGSRGGGGGG--GGYDGAGSAPSGRYHPY

Query:  G
        G
Subjt:  G

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-10858.96Show/hide
Query:  MDSKPNDVATNGEHEDAKPLNH-KDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    +     E  D KP    +DD  +  P S G   SAGKIFVGGL RETTSA+F+KHFG YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDVATNGEHEDAKPLNH-KDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ
        +D HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+G +KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E++G+Q
Subjt:  EDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQ

Query:  VEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGY---GGSFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY
        VEIKKAEPKK N    PSKRF DSR ++ G YGD YG   GGGY   GG +++GG Y G R GGYGGYGG +F GYG  G  GG+G YR +P++GYS RY
Subjt:  VEIKKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGY---GGSFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGMGAYREDPSMGYSARY

Query:  ---GASFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPSTGGY--AGSYDMGMGTGYAAGGRGSFYGSRGGG-
           G  ++R GY                        GGYGGP  SY         G Y  G G    GGY   G YDMG   G  AGG G+  G  GGG 
Subjt:  ---GASFSR-GYDF---------------------RGGYGGPDESY---------GAYNSG-GAPSTGGY--AGSYDMGMGTGYAAGGRGSFYGSRGGG-

Query:  --GGGGGYDGAGSAPSGRYHPYGR
          GGGGG  G G   SGRYHPYGR
Subjt:  --GGGGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGACGTTGCCACTAATGGTGAACATGAAGACGCCAAGCCCTTGAATCATAAAGATGATGGGAGTAGACATGACCCTCC
ATCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTTGTTGGTGGTTTACCGCGGGAAACGACTTCTGCGCAATTTGTCAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGCAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGATCCTCCAGTTCTCGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGTATTCCTACATCTGTAGATGA
AGACGAGTTCAGAGATTTCTTTATGCAATATGGCGTGGTTAAGGAACACCAGATTATGCGCGACCACTCCACCAGTCGGTCTCGTGGATTTGGTTTTATTACATTTGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGGAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATTAAGAAGGCGGAGCCAAAAAAGGCAAATCCACCTCCAGCC
CCTTCAAAGAGATTCCACGATTCTAGGCCAAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTCGGAGGTGGTGGGTATGGTGGCAGTTTCAGGGCAGGTGGTCC
ATATGGTGCCAGAGGTGGTGGATATGGTGGATATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACCGGGAAGACCCCTCCATGG
GTTACTCTGCTCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAGT
ACTGGTGGGTATGCAGGTAGCTATGATATGGGCATGGGCACTGGATATGCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGAGGAGGATA
CGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGACGTTGCCACTAATGGTGAACATGAAGACGCCAAGCCCTTGAATCATAAAGATGATGGGAGTAGACATGACCCTCC
ATCTCATGGCGACGGGGCCAGTGCTGGGAAAATCTTTGTTGGTGGTTTACCGCGGGAAACGACTTCTGCGCAATTTGTCAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGCAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGATCCTCCAGTTCTCGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGTATTCCTACATCTGTAGATGA
AGACGAGTTCAGAGATTTCTTTATGCAATATGGCGTGGTTAAGGAACACCAGATTATGCGCGACCACTCCACCAGTCGGTCTCGTGGATTTGGTTTTATTACATTTGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGGAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAGATTAAGAAGGCGGAGCCAAAAAAGGCAAATCCACCTCCAGCC
CCTTCAAAGAGATTCCACGATTCTAGGCCAAGTTACAGTGGTGCCTATGGGGATGCATATGGGGAGTTCGGAGGTGGTGGGTATGGTGGCAGTTTCAGGGCAGGTGGTCC
ATATGGTGCCAGAGGTGGTGGATATGGTGGATATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATGGGAGCTTACCGGGAAGACCCCTCCATGG
GTTACTCTGCTCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCTGACGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAGT
ACTGGTGGGTATGCAGGTAGCTATGATATGGGCATGGGCACTGGATATGCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGAGGAGGATA
CGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
Protein sequenceShow/hide protein sequence
MSENSMDSKPNDVATNGEHEDAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA
PSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPS
TGGYAGSYDMGMGTGYAAGGRGSFYGSRGGGGGGGGYDGAGSAPSGRYHPYGR