CuGenDBv2

Gene ID	Cucsat.G13342
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Ribosomal protein L34
Genome location	ctg1838:4802574..4811144
RNA-Seq Expression	Cucsat.G13342
Synteny	Cucsat.G13342
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000271 - Ribosomal protein L34 IPR020939 - Ribosomal protein L34, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7018271.1 hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.05e-72

91.13

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFAR
        LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSTIRRKRNHGFFAR

XP_004141160.2 uncharacterized protein LOC101210601 [Cucumis sativus]

3.27e-141

100

Show/hide

Query:  MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ
        MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ
Subjt:  MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ

Query:  NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR
        NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR

XP_008447614.1 PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo]

6.94e-79

97.58

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFAR
        LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSTIRRKRNHGFFAR

XP_022955351.1 uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata]

1.12e-72

88.46

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF
        LLFPKRTFQPSTIRRKRNHGFFAR  S  F
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF

XP_022955352.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata]

1.67e-72

91.13

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFAR
        LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSTIRRKRNHGFFAR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIB6 Uncharacterized protein

1.58e-141

100

Show/hide

Query:  MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ
        MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ
Subjt:  MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQ

Query:  NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR
        NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  NNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFAR

A0A1S3BHV7 uncharacterized protein LOC103490028

3.36e-79

97.58

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFAR
        LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSTIRRKRNHGFFAR

A0A6J1GTJ1 uncharacterized protein LOC111457406 isoform X1

5.41e-73

88.46

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF
        LLFPKRTFQPSTIRRKRNHGFFAR  S  F
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF

A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X2

8.07e-73

91.13

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFAR
        LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  LLFPKRTFQPSTIRRKRNHGFFAR

A0A6J1IS44 uncharacterized protein LOC111480019 isoform X1

2.53e-71

87.69

Show/hide

Query:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM
        MASKLLIRTG+SLMNRLRLSS  QNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPDGD SSTQEPM
Subjt:  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPM

Query:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF
        LLFPKRTFQPSTIRRKRNHGFFAR  S  F
Subjt:  LLFPKRTFQPSTIRRKRNHGFFARNHSFIF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13882.1 Ribosomal protein L34

1.4e-27

55.12

Show/hide

Query:  MASKLLIRTGSSLMNRL---RLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQ
        MA+K LIR+G+SLMNR      ++  QNN     Q ++   G E+ P  FPS+S  Q++   + NDT SL++L   G  +P GLPSL FFLP+ D SS  
Subjt:  MASKLLIRTGSSLMNRL---RLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQ

Query:  EPMLLFPKRTFQPSTIRRKRNHGFFAR
        EP+LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  EPMLLFPKRTFQPSTIRRKRNHGFFAR

AT3G13882.2 Ribosomal protein L34

1.3e-17

41.22

Show/hide

Query:  GVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLP--------DGDASS-----------------------------------
        G E+ P  FPS+S  Q++   + NDT SL++L   G  +P GLPSL FFLP        D   SS                                   
Subjt:  GVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLP--------DGDASS-----------------------------------

Query:  --TQEPMLLFPKRTFQPSTIRRKRNHGFFAR
          + EP+LLFPKRTFQPSTIRRKRNHGFFAR
Subjt:  --TQEPMLLFPKRTFQPSTIRRKRNHGFFAR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAAGAAAAAGGAAATGTACCCTACGGTTCCTCGCACTTCTGTTCACACCCCACCCCACCTTCGCCACAGCGCACACCGCCGCTAACCCACAGGGAATTTTCTTTCT
TCTCCCTCGATCTCCAGCGGCAGCTACACCAACTTTTCATTTTGCTGCACACTGTCACCAACCTCACTGCCACGCCCACCTTTTATTTCTAAGGGTTAGTGAGCTCGTTC
TTTTGCTAATGGCGTCCAAACTTCTTATTCGTACGGGAAGTTCTTTGATGAATCGATTGCGATTAAGCTCAGCGCATCAGAATAACAGGATTTGGGGTAGCCAAGCTCTG
TCCCATGGCCATGGCGTTGAAGTTACTCCGATGCTTTTTCCTTCAGTTTCTAAGCACCAGACTGCTCATCCTTTGCAGCAGAATGACACCGAATCGTTGAGGCAGCTCCA
ATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCTTCGCTCCGGTTCTTTTTGCCTGACGGAGATGCTTCTTCAACACAAGAACCGATGCTCTTATTTCCTAAAAGGACAT
TTCAACCTAGCACCATCAGGCGAAAAAGGAATCATGGTTTTTTTGCTCGAAATCACTCGTTTATCTTTGAACAGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCG
AAGGATTGCAAAGGGGCGCTCAAGAATAACTGCATAATGTTCATCTCAAGTCAGGTGCAATTGAATCGCCCTACCAATATCTTATTGTGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQAL
SHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHGFFARNHSFIFEQQSNQGRTESYCS
KDCKGALKNNCIMFISSQVQLNRPTNILLC

Cucsat.G13342 (gene) of Cucumber (B10) v3 genome