; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13353 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13353
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionmediator of RNA polymerase II transcription subunit 9-like
Genome locationctg1838:5067586..5070399
RNA-Seq ExpressionCucsat.G13353
SyntenyCucsat.G13353
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR038790 - Mediator of RNA polymerase II transcription subunit 9, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574160.1 Mediator of RNA polymerase II transcription subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.57e-10377.21Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF  GGNWSMIPNIPNL+NSSNLS QES++LQQQQFSLQ QQQQQQQQQQQQQ+FHHQQQQFQPQIQ QQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQLQ QHFPQQQQQQQQQQ  YHFQQQQ                    QQQQQQQQQQQQQQYHQHQSLASHFHL HLVEKLAD IENG RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                      VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEELVKGE
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

KAG7013214.1 Mediator of RNA polymerase II transcription subunit 9, partial [Cucurbita argyrosperma subsp. argyrosperma]5.37e-10276.53Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF  GGNWSMIPNIPNL+NSSNLS QES++LQQQQFSLQ QQQQQQQQQQQQQ+FHHQQQQFQPQIQ QQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQLQ QHFPQQ QQQQQQQ  YHFQQQQ                    QQQQQQQQQQQQQQYHQHQSLASHFHL HLVEKLAD IENG RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                      +NDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEELVKGE
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

XP_011652352.2 mediator of RNA polymerase II transcription subunit 9 [Cucumis sativus]1.02e-12889.8Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQF
        MDFPGGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQF
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQF

Query:  QQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALV
        QQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL 
Subjt:  QQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALV

Query:  AILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP
                                     VNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP
Subjt:  AILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP

XP_022944890.1 mediator of RNA polymerase II transcription subunit 9-like [Cucurbita moschata]1.03e-10477.55Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF  GGNWSMIPNIPNL+NSSNLS QES++LQQQQFSLQ  QQQQQQQQQQQQ+FHHQQQQFQPQIQ QQQFQQQQLSPQFQQQQPSPQ QPQQQPSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQLQ QHFPQQQQQQQQQQQQYHFQQQQQ                   QQQQQQQQQQQQQQYHQHQSLASHFHL HLVEKLAD IENG RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                      VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEELVKGE
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

XP_038903145.1 mediator of RNA polymerase II transcription subunit 9 [Benincasa hispida]4.99e-10680.98Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF GGGNWSMIPNIPNLTNSSNLS QES+F   QQFSLQ   QQQQQ QQQQQ+FHHQQQQFQPQIQPQQQFQQQQ SPQFQQQQPSPQIQPQQQPSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQ----------YHQHQSLASHFHLLHLVEKLADAIEN
        FQQQLQ QHFPQQQQQQQQQQQ YHFQQQQQQ RLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQ          YHQHQSLASHFHLLHLVEKLADAIEN
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQ----------YHQHQSLASHFHLLHLVEKLADAIEN

Query:  GTRDQQSDALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEEL
        GTRDQQSDAL                              VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEEL
Subjt:  GTRDQQSDALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEEL

Query:  VKGEP
        VKG+P
Subjt:  VKGEP

TrEMBL top hitse value%identityAlignment
A0A6J1D301 Mediator of RNA polymerase II transcription subunit 95.38e-9673.65Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF GGGNWSMIPNIP L+NSSNLS QES++LQQQQFSLQ           QQQ FHHQQQQFQPQ+QPQQ FQQQQ SPQFQQQQPSPQIQPQQ PSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQ--RLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSD
        FQQQLQ QHFPQQQQQQQQ    YHFQQQQQQQ  RLLQQ            QQQQQQQQQQQQQQYHQHQSLASHFHL HLVEKLADAIENG RDQQSD
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQ--RLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSD

Query:  ALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
        AL                              VNDLNNHFEKC+QLLNSISGSLSSKAMTV+GQKKKLEEH+QLL+HRRELIGKYKNSVEELVKG+
Subjt:  ALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

A0A6J1FZC2 mediator of RNA polymerase II transcription subunit 9-like4.97e-10577.55Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF  GGNWSMIPNIPNL+NSSNLS QES++LQQQQFSLQ  QQQQQQQQQQQQ+FHHQQQQFQPQIQ QQQFQQQQLSPQFQQQQPSPQ QPQQQPSPQ
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQLQ QHFPQQQQQQQQQQQQYHFQQQQQ                   QQQQQQQQQQQQQQYHQHQSLASHFHL HLVEKLAD IENG RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                      VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEELVKGE
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

A0A6J1GCY0 mediator of RNA polymerase II transcription subunit 9-like1.62e-9874.24Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF GGGNWSMIPNIP L+NSSNLS QES++LQQQQFSLQ    QQQQQQQQQ +FHHQ QQFQPQIQPQQQFQQQQ SPQFQQ QPSPQIQPQQQ S Q
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQ+Q QHFPQQQQQQQQQQQQYHFQQQQQ  RLL                 QQQQQQQ+QQQYHQHQSLASHFHL HLVEKLADAIE G RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP
                                      VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLLS+RRELIGKYK+SVEEL KGEP
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP

A0A6J1HX54 Mediator of RNA polymerase II transcription subunit 91.54e-8766.34Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS----------QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQI
        MDF  GGNWSMIPNIPNL+NSSNLS          QES++LQQQQFSLQ     QQQQQQQQQ+FH QQQQFQPQIQ QQQFQQQQLSPQFQQQQPSPQ 
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS----------QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQI

Query:  QPQQQPSPQFQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENG
                 FQQQLQ QHFPQQQQQQQQQ   YHFQQQQ                              QQQQYHQHQSLASHFHL HLVEKLAD IENG
Subjt:  QPQQQPSPQFQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENG

Query:  TRDQQSDALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELV
         RDQQSDAL                              VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLL+HRRELIGKYKNSVEELV
Subjt:  TRDQQSDALVAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELV

Query:  KGE
        KGE
Subjt:  KGE

A0A6J1K651 mediator of RNA polymerase II transcription subunit 9-like3.26e-9874.58Show/hide
Query:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ
        MDF GGGNWSMIPNIP L+NSSNLS QES++LQQQQFSLQ  QQQQQQQQQQQ +FHHQ QQFQPQIQPQQQFQQQQ SPQFQQ QPSPQIQPQQQ S Q
Subjt:  MDFPGGGNWSMIPNIPNLTNSSNLS-QESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQ

Query:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL
        FQQQ+Q QHFPQQQQQQQQQQ  YHFQQQQQ  RLL                 QQQQQQQ+QQQYHQHQSLASHFHL HLVEKLADAIE G RDQQSDAL
Subjt:  FQQQLQTQHFPQQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDAL

Query:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP
                                      VNDLNNHFEKC+QLLNSISGSLSSKAMTVEGQKKKLEEHEQLLS+RRELIGKYK+SVEELVKGEP
Subjt:  VAILIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP

SwissProt top hitse value%identityAlignment
Q8RWA2 Mediator of RNA polymerase II transcription subunit 95.6e-2049.48Show/hide
Query:  GGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQFQQQL
        GGGNWSMIPN+    N    +        QQ  LQ QQ QQQQQQQQQQ FH QQQQ       Q Q QQQQ  PQ            QQQ   Q+QQ  
Subjt:  GGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQFQQQL

Query:  QTQHFPQQQQQQQQQQ--QQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALVAI
        Q QHF QQQQ QQQQ+  Q    Q Q  Q    QQ      Q      QQQQQ  Q   Q   QHQSLASHFHL  +VEKLAD IENGTRDQ SDAL   
Subjt:  QTQHFPQQQQQQQQQQ--QQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALVAI

Query:  LIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                   VN+LN+HF+KC+QLLNSISGSL SK MTV+GQK+ +EE EQLL  RR+LI +Y+ S+EE+V  E
Subjt:  LIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE

Arabidopsis top hitse value%identityAlignment
AT1G55080.1 MED94.0e-2149.48Show/hide
Query:  GGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQFQQQL
        GGGNWSMIPN+    N    +        QQ  LQ QQ QQQQQQQQQQ FH QQQQ       Q Q QQQQ  PQ            QQQ   Q+QQ  
Subjt:  GGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQFQQQL

Query:  QTQHFPQQQQQQQQQQ--QQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALVAI
        Q QHF QQQQ QQQQ+  Q    Q Q  Q    QQ      Q      QQQQQ  Q   Q   QHQSLASHFHL  +VEKLAD IENGTRDQ SDAL   
Subjt:  QTQHFPQQQQQQQQQQ--QQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALVAI

Query:  LIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE
                                   VN+LN+HF+KC+QLLNSISGSL SK MTV+GQK+ +EE EQLL  RR+LI +Y+ S+EE+V  E
Subjt:  LIVFKKKSLRLIKILFALIICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCCCTGGAGGAGGAAACTGGAGTATGATCCCCAACATCCCTAATCTCACCAATTCCTCTAATCTTTCACAAGAATCCATCTTTCTCCAACAGCAACAATTTTC
TCTTCAACATCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAAGCATTTCACCACCAACAACAGCAATTTCAGCCCCAAATCCAACCCCAACAGCAATTCCAGC
AGCAACAGCTCTCCCCTCAATTTCAACAGCAACAACCCTCCCCTCAAATCCAGCCCCAACAACAACCCTCCCCTCAATTTCAACAGCAATTGCAAACCCAACATTTCCCC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAATATCATTTTCAACAACAACAGCAGCAGCAGCGGCTTCTTCAACAGCAACAGCAGCAACAACAGCAACAGCAACA
GCAGCAGCAACAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAATATCATCAGCACCAATCTCTAGCTTCCCATTTTCATCTACTTCATCTTGTGGAGAAATTAG
CGGATGCAATCGAGAACGGAACTAGAGATCAGCAATCTGATGCATTGGTAGCAATTTTGATTGTTTTTAAAAAAAAATCCTTAAGATTAATTAAAATCTTGTTTGCTCTG
ATAATTTGTTCTTGTAACGTTTGGAAGGTTAATGATCTAAATAACCACTTTGAGAAGTGCCGGCAGCTGTTGAACTCAATATCTGGATCACTCAGCTCGAAAGCTATGAC
AGTAGAGGGGCAGAAGAAAAAGCTAGAAGAACATGAGCAGTTGTTAAGTCATCGAAGGGAATTGATTGGGAAATATAAGAACTCTGTTGAAGAGCTTGTCAAGGGCGAGC
CCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCCCTGGAGGAGGAAACTGGAGTATGATCCCCAACATCCCTAATCTCACCAATTCCTCTAATCTTTCACAAGAATCCATCTTTCTCCAACAGCAACAATTTTC
TCTTCAACATCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAAGCATTTCACCACCAACAACAGCAATTTCAGCCCCAAATCCAACCCCAACAGCAATTCCAGC
AGCAACAGCTCTCCCCTCAATTTCAACAGCAACAACCCTCCCCTCAAATCCAGCCCCAACAACAACCCTCCCCTCAATTTCAACAGCAATTGCAAACCCAACATTTCCCC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAATATCATTTTCAACAACAACAGCAGCAGCAGCGGCTTCTTCAACAGCAACAGCAGCAACAACAGCAACAGCAACA
GCAGCAGCAACAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAATATCATCAGCACCAATCTCTAGCTTCCCATTTTCATCTACTTCATCTTGTGGAGAAATTAG
CGGATGCAATCGAGAACGGAACTAGAGATCAGCAATCTGATGCATTGGTAGCAATTTTGATTGTTTTTAAAAAAAAATCCTTAAGATTAATTAAAATCTTGTTTGCTCTG
ATAATTTGTTCTTGTAACGTTTGGAAGGTTAATGATCTAAATAACCACTTTGAGAAGTGCCGGCAGCTGTTGAACTCAATATCTGGATCACTCAGCTCGAAAGCTATGAC
AGTAGAGGGGCAGAAGAAAAAGCTAGAAGAACATGAGCAGTTGTTAAGTCATCGAAGGGAATTGATTGGGAAATATAAGAACTCTGTTGAAGAGCTTGTCAAGGGCGAGC
CCTAG
Protein sequenceShow/hide protein sequence
MDFPGGGNWSMIPNIPNLTNSSNLSQESIFLQQQQFSLQHQQQQQQQQQQQQQAFHHQQQQFQPQIQPQQQFQQQQLSPQFQQQQPSPQIQPQQQPSPQFQQQLQTQHFP
QQQQQQQQQQQQYHFQQQQQQQRLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHQHQSLASHFHLLHLVEKLADAIENGTRDQQSDALVAILIVFKKKSLRLIKILFAL
IICSCNVWKVNDLNNHFEKCRQLLNSISGSLSSKAMTVEGQKKKLEEHEQLLSHRRELIGKYKNSVEELVKGEP