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Cucsat.G13362 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13362
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription factor bHLH87-like
Genome locationctg1838:5316854..5318243
RNA-Seq ExpressionCucsat.G13362
SyntenyCucsat.G13362
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146860.1 transcription factor bHLH87 [Cucumis sativus]5.10e-9399.34Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        RVGKLAEDSKVLFE EKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

XP_008447580.1 PREDICTED: transcription factor bHLH87-like [Cucumis melo]1.83e-7183.55Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        RV KLA+DS V FEREKS P+EVTTGGVLFEVLEND+GIA KGGFLDI ENQK +QQN IIE  PSSTNSTT SPSPS SSS IEEIEQ VD+D+ VSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        K+WIYYAAVF+PVNLGLETVEKKRR+NVK+SKEPQTVAARKRREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

XP_022148257.1 transcription factor bHLH87-like [Momordica charantia]6.81e-4161.33Show/hide
Query:  DSKVLFEREKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQKPNQQNTIIENQPSSTNSTTL----SPSPSPSSSNIEEIEQAVDRDQVVSQMKE
        D K+L +R  SWP   ++GG+L E LENDKG  A + G  DI EN KP QQN I E QPSS N        + SPSPSSSN  ++E A  R+  +++MK 
Subjt:  DSKVLFEREKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQKPNQQNTIIENQPSSTNSTTL----SPSPSPSSSNIEEIEQAVDRDQVVSQMKE

Query:  WIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
         +Y+AA FRPVNLGLETVEKKRR+NVK SKEPQTVAARKRREKISEKIRV
Subjt:  WIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

XP_023528594.1 transcription factor bHLH87-like [Cucurbita pepo subsp. pepo]3.71e-3361.6Show/hide
Query:  GVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRK
        G   E LENDKGIA KGG LDI ENQKP QQN+                    SSSN ++++   +RD+ +SQMKE +YYAAVFRPV+ G ETVEKKRR+
Subjt:  GVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRK

Query:  NVKMSKEPQTVAARKRREKISEKIR
        NVK SKEPQTVAARKRREKISEKIR
Subjt:  NVKMSKEPQTVAARKRREKISEKIR

XP_038902463.1 transcription factor bHLH87-like [Benincasa hispida]3.85e-6877.63Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        +V KLA+DSKVLFEREKSWP+  ++GGVLF+ +ENDKG A +GGFLDI ENQKP QQN+IIE QPSS NS   S SPSPSSSN +E+E+ VDRDQ+VSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        KE IYYAAVFRPVNLG ETVEKKRR+NVKMSKEPQT+AAR RREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

TrEMBL top hitse value%identityAlignment
A0A0A0LDH7 BHLH domain-containing protein2.47e-9399.34Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        RVGKLAEDSKVLFE EKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

A0A1S3BIP2 transcription factor bHLH87-like8.86e-7283.55Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        RV KLA+DS V FEREKS P+EVTTGGVLFEVLEND+GIA KGGFLDI ENQK +QQN IIE  PSSTNSTT SPSPS SSS IEEIEQ VD+D+ VSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        K+WIYYAAVF+PVNLGLETVEKKRR+NVK+SKEPQTVAARKRREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

A0A5D3BVP3 Transcription factor bHLH87-like8.86e-7283.55Show/hide
Query:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM
        RV KLA+DS V FEREKS P+EVTTGGVLFEVLEND+GIA KGGFLDI ENQK +QQN IIE  PSSTNSTT SPSPS SSS IEEIEQ VD+D+ VSQM
Subjt:  RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQM

Query:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        K+WIYYAAVF+PVNLGLETVEKKRR+NVK+SKEPQTVAARKRREKISEKIRV
Subjt:  KEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

A0A6J1D4K8 transcription factor bHLH87-like3.30e-4161.33Show/hide
Query:  DSKVLFEREKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQKPNQQNTIIENQPSSTNSTTL----SPSPSPSSSNIEEIEQAVDRDQVVSQMKE
        D K+L +R  SWP   ++GG+L E LENDKG  A + G  DI EN KP QQN I E QPSS N        + SPSPSSSN  ++E A  R+  +++MK 
Subjt:  DSKVLFEREKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQKPNQQNTIIENQPSSTNSTTL----SPSPSPSSSNIEEIEQAVDRDQVVSQMKE

Query:  WIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
         +Y+AA FRPVNLGLETVEKKRR+NVK SKEPQTVAARKRREKISEKIRV
Subjt:  WIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

A0A6J1GXV2 transcription factor bHLH87-like2.10e-3161.34Show/hide
Query:  LENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSK
        +E+DKGIA KGG LDI ENQKP QQN+                    SSSN ++++   +RD+ +SQMKE +YYAAVFRPV+ G ETVEKKRR+NVK SK
Subjt:  LENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSK

Query:  EPQTVAARKRREKISEKIR
        EPQTVAARKRREKISEKIR
Subjt:  EPQTVAARKRREKISEKIR

SwissProt top hitse value%identityAlignment
A0A0P0WQ90 Transcription factor LATE FLOWERING1.8e-0645.71Show/hide
Query:  QVVSQMKEWIYYAAVFRPVNLG------------LETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        + ++Q+KE IY AA  RPV LG                ++ RRKNV++S +PQTVAAR RRE++SE++RV
Subjt:  QVVSQMKEWIYYAAVFRPVNLG------------LETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

O81313 Transcription factor IND9.7e-0843.24Show/hide
Query:  PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        P    +  +++  + D+ +  MKE  Y  AV +PV++   TV K  R+NV++S +PQTV AR+RRE+ISEKIR+
Subjt:  PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

Q8S3D2 Transcription factor bHLH873.1e-1447.9Show/hide
Query:  ASKGGFLDIL-ENQKPNQQNTIIENQPSSTN-----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKE
        + KGGF  I  ENQ  +++    + +  S+N     ST LS +  P +             + ++QMKE IY AA FRPVN GLE VEK +RKNVK+S +
Subjt:  ASKGGFLDIL-ENQKPNQQNTIIENQPSSTN-----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKE

Query:  PQTVAARKRREKISEKIRV
        PQTVAAR+RRE+ISEKIRV
Subjt:  PQTVAARKRREKISEKIRV

Q9FHA7 Transcription factor HEC18.2e-0737.93Show/hide
Query:  TNSTTLSPSPSPSSSNIEEIEQAVDRDQ--VVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        TN +++SP+ + SS  +++   + + +    ++ M+E I+  AV +P+++  E V+  +R+NV++SK+PQ+VAAR RRE+ISE+IR+
Subjt:  TNSTTLSPSPSPSSSNIEEIEQAVDRDQ--VVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

Q9SND4 Transcription factor HEC23.3e-0846.75Show/hide
Query:  SPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        +PSPSSS  E+     D   + + M+E I+  AV +P+++  E+V+  +RKNV++SK+PQ+VAAR RRE+ISE+IR+
Subjt:  SPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

Arabidopsis top hitse value%identityAlignment
AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.2e-1547.9Show/hide
Query:  ASKGGFLDIL-ENQKPNQQNTIIENQPSSTN-----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKE
        + KGGF  I  ENQ  +++    + +  S+N     ST LS +  P +             + ++QMKE IY AA FRPVN GLE VEK +RKNVK+S +
Subjt:  ASKGGFLDIL-ENQKPNQQNTIIENQPSSTN-----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKE

Query:  PQTVAARKRREKISEKIRV
        PQTVAAR+RRE+ISEKIRV
Subjt:  PQTVAARKRREKISEKIRV

AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.4e-0946.75Show/hide
Query:  SPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        +PSPSSS  E+     D   + + M+E I+  AV +P+++  E+V+  +RKNV++SK+PQ+VAAR RRE+ISE+IR+
Subjt:  SPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.9e-0943.24Show/hide
Query:  PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        P    +  +++  + D+ +  MKE  Y  AV +PV++   TV K  R+NV++S +PQTV AR+RRE+ISEKIR+
Subjt:  PSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.4e-0639.08Show/hide
Query:  SSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        S T +T LS          E +E+       +  MKE +Y  A  + V++   TV+K +R+NV++S +PQ+VAAR RRE+ISE+IR+
Subjt:  SSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV

AT5G67060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.8e-0837.93Show/hide
Query:  TNSTTLSPSPSPSSSNIEEIEQAVDRDQ--VVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV
        TN +++SP+ + SS  +++   + + +    ++ M+E I+  AV +P+++  E V+  +R+NV++SK+PQ+VAAR RRE+ISE+IR+
Subjt:  TNSTTLSPSPSPSSSNIEEIEQAVDRDQ--VVSQMKEWIYYAAVFRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGTAGGGAAATTGGCTGAGGATTCCAAGGTTTTATTTGAACGTGAAAAGTCGTGGCCGATGGAAGTTACCACCGGTGGAGTTTTGTTCGAAGTGCTTGAAAATGACAA
AGGAATTGCATCAAAAGGTGGATTTTTGGATATTTTGGAGAACCAAAAACCAAACCAACAAAACACCATAATAGAAAATCAGCCAAGTTCAACCAACTCTACAACTCTAT
CACCATCTCCCTCTCCATCATCTTCGAACATCGAAGAAATCGAGCAGGCTGTTGATCGAGATCAAGTTGTGTCACAAATGAAGGAATGGATATACTATGCAGCGGTGTTT
AGGCCAGTAAACTTGGGATTGGAGACGGTGGAGAAGAAGAGGCGGAAGAACGTCAAAATGTCGAAGGAGCCTCAAACGGTTGCGGCAAGAAAACGAAGGGAGAAAATAAG
CGAAAAAATTAGGGTT
mRNA sequenceShow/hide mRNA sequence
AGAGTAGGGAAATTGGCTGAGGATTCCAAGGTTTTATTTGAACGTGAAAAGTCGTGGCCGATGGAAGTTACCACCGGTGGAGTTTTGTTCGAAGTGCTTGAAAATGACAA
AGGAATTGCATCAAAAGGTGGATTTTTGGATATTTTGGAGAACCAAAAACCAAACCAACAAAACACCATAATAGAAAATCAGCCAAGTTCAACCAACTCTACAACTCTAT
CACCATCTCCCTCTCCATCATCTTCGAACATCGAAGAAATCGAGCAGGCTGTTGATCGAGATCAAGTTGTGTCACAAATGAAGGAATGGATATACTATGCAGCGGTGTTT
AGGCCAGTAAACTTGGGATTGGAGACGGTGGAGAAGAAGAGGCGGAAGAACGTCAAAATGTCGAAGGAGCCTCAAACGGTTGCGGCAAGAAAACGAAGGGAGAAAATAAG
CGAAAAAATTAGGGTT
Protein sequenceShow/hide protein sequence
RVGKLAEDSKVLFEREKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIENQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVF
RPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRV