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Cucsat.G13370 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13370
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDynein light chain
Genome locationctg1838:5504236..5505350
RNA-Seq ExpressionCucsat.G13370
SyntenyCucsat.G13370
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]5.34e-6089.52Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ    
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTH
        P PTH
Subjt:  PEPTH

XP_004146843.1 dynein light chain 2, cytoplasmic [Cucumis sativus]9.00e-80100Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTHHFSLMDNTLKP
        PEPTHHFSLMDNTLKP
Subjt:  PEPTHHFSLMDNTLKP

XP_008454627.1 PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo]4.30e-6989.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQ  
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEP-THHFSLMDNTLKP
        P+P THHFSL+D TLKP
Subjt:  PEP-THHFSLMDNTLKP

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]5.34e-6089.52Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ    
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTH
        P PTH
Subjt:  PEPTH

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]2.96e-6487.83Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAI+GETDML+AMQQDALNLAAKALDSFDVTEATDIARFIKKEFD+I+GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS+++QQ 
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTHHFSLMDNTLK
        P+PT  FS+M+ TLK
Subjt:  PEPTHHFSLMDNTLK

TrEMBL top hitse value%identityAlignment
A0A0A0LIK5 Dynein light chain7.93e-66100Show/hide
Query:  DALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEPTHHFSLMDNTLKP
        DALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEPTHHFSLMDNTLKP
Subjt:  DALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEPTHHFSLMDNTLKP

A0A1S3BZU7 Dynein light chain2.08e-6989.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQ  
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEP-THHFSLMDNTLKP
        P+P THHFSL+D TLKP
Subjt:  PEP-THHFSLMDNTLKP

A0A5A7T1H5 Dynein light chain2.08e-6989.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +GGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQ  
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEP-THHFSLMDNTLKP
        P+P THHFSL+D TLKP
Subjt:  PEP-THHFSLMDNTLKP

A0A6J1FSQ1 Dynein light chain2.58e-6089.52Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ    
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTH
        P PTH
Subjt:  PEPTH

A0A6J1J2G7 Dynein light chain2.58e-6089.52Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ    
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQF

Query:  PEPTH
        P PTH
Subjt:  PEPTH

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm6.7e-1750.56Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M E KA++   DM E MQQDA++ A +AL+ F++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

O96860 Dynein light chain 2, cytoplasmic6.7e-1750.56Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM E MQQDA++ A +AL+ +++ +  DIA FIKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q22799 Dynein light chain 1, cytoplasmic1.5e-1648.31Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M++ KA++   DM + MQQDA++ A +AL+ +++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q24117 Dynein light chain 1, cytoplasmic1.5e-1649.44Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM E MQQDA++ A +AL+ +++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q39580 Dynein 8 kDa light chain, flagellar outer arm1.5e-1651.76Show/hide
Query:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        KA++   DM E MQ DA++ A +AL+ +++ +  DIA +IKKEFDR H   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.5e-2152.17Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA
        MLEGKA+V ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  +G GWQC+VG++FG F TH  G FIYF + +L  L+F+G++
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA

AT3G16120.1 Dynein light chain type 1 family protein4.9e-2356.04Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA V ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  +G GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT4G15930.1 Dynein light chain type 1 family protein3.8e-1544.71Show/hide
Query:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        +A++   DM + MQ++A+ +A  A + + V +  DIA  IKKEFD+ HG  W CIVG +FGS+VTH    F+YF +   A+LLF+
Subjt:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

AT4G27360.1 Dynein light chain type 1 family protein1.5e-3575.82Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA++G+TDM + M++DAL+LA+KALD FDVTE T IARFIKKEFDR +G GWQCIVGT FGSFVTHC GCFI+F VGSL ILLF+GS
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT5G20110.1 Dynein light chain type 1 family protein4.1e-1448.72Show/hide
Query:  DMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ +G  W CIVG+ FGSFVTH  GCFIYF +  L +LLF+
Subjt:  DMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGGGAAAGCAATCGTGGGAGAAACGGATATGTTGGAGGCCATGCAACAGGACGCTTTGAACCTTGCAGCTAAGGCACTTGATAGTTTTGATGTCACTGAAGC
CACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGAATACATGGAGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGAT
GCTTCATTTATTTTTGTGTTGGAAGTCTTGCAATTTTACTCTTTAGGGGTTCTGCTGCCTCACAACAACAACAACAATTTCCTGAACCTACTCATCACTTTTCTCTTATG
GACAATACTCTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAGGGAAAGCAATCGTGGGAGAAACGGATATGTTGGAGGCCATGCAACAGGACGCTTTGAACCTTGCAGCTAAGGCACTTGATAGTTTTGATGTCACTGAAGC
CACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGAATACATGGAGGAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGAT
GCTTCATTTATTTTTGTGTTGGAAGTCTTGCAATTTTACTCTTTAGGGGTTCTGCTGCCTCACAACAACAACAACAATTTCCTGAACCTACTCATCACTTTTCTCTTATG
GACAATACTCTCAAACCATGA
Protein sequenceShow/hide protein sequence
MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGGGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQQFPEPTHHFSLM
DNTLKP