; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13524 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13524
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionlysine-rich arabinogalactan protein 19-like
Genome locationctg1838:8276534..8280450
RNA-Seq ExpressionCucsat.G13524
SyntenyCucsat.G13524
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY15921.1 Uncharacterized protein TCM_034844 [Theobroma cacao]4.14e-1145.52Show/hide
Query:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP-----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPV
        VLLALIA+ +LGQAP +AP  SP  SSP  +PKS+P           PP+ +TPPSS+P              S P  +P SSPPAPPT P+ +P   P 
Subjt:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP-----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPV

Query:  PSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        P+SSIS PPA  P+   +P S A +NR+ V GS +  V+++A LL
Subjt:  PSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

KAE8099952.1 hypothetical protein FH972_017895 [Carpinus fangiana]5.49e-1250.66Show/hide
Query:  SAFVFVVLLALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATP-----PSSSP-LAPSGVAPAPFTAT----SPPAMAP-ASSPPAPPTA-PSD
        S+FV ++L+AL+A+S L Q P AAP +SPTKS P S+P +A PPT A P     P+SSP ++P    PAP  AT    SP A +P ASSPPAPPT+ P +
Subjt:  SAFVFVVLLALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATP-----PSSSP-LAPSGVAPAPFTAT----SPPAMAP-ASSPPAPPTA-PSD

Query:  SPMITPVPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        S      P S I  PP    SPTSTPGS A +NR+A +GS+ +A++++ALLL
Subjt:  SPMITPVPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

XP_018833931.2 classical arabinogalactan protein 10-like [Juglans regia]1.40e-1750.7Show/hide
Query:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP-LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVPSS
        S FV+++LL AL+A S   QAPG AP  SPTKS PASSPK+APPPT  + P+ SP ++P   APAP ++ +PP  AP+SSPPAPPT+P+ +P + P    
Subjt:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP-LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVPSS

Query:  SISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        SIS PP+ + SPT +PG+GA +N ++V+GS+ + ++++ LL+
Subjt:  SISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

XP_022937303.1 lysine-rich arabinogalactan protein 19-like [Cucurbita moschata]8.88e-5382.19Show/hide
Query:  MASSSAFVFVVLLALIAASLGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITP
        MASSSAFVFVVL+ALIA SLGQAPGAAPASSPTKS P SSPKSAP PTVATPP+SSP   LAPSG AP+P T TSPPAM+PA+SPPAPPTAPS+SP  TP
Subjt:  MASSSAFVFVVLLALIAASLGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITP

Query:  VPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        VP+ SIS PPALAPSP STPG+G  VNRIAVSGSII AVISSALLL
Subjt:  VPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

XP_040997605.1 classical arabinogalactan protein 10-like [Juglans microcarpa x Juglans regia]7.01e-1548.61Show/hide
Query:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVP
        S FV+++LL AL+A S   QAPG AP  SPTKS PASSPK+APPP   + P+ SP   ++P   APAP +A +PP  AP+SSPPAPPT+   +P   P  
Subjt:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVP

Query:  SSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
         +SIS+PP+ + SP  +PG+GA +N ++V+GS+ + ++++ LL+
Subjt:  SSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

TrEMBL top hitse value%identityAlignment
A0A061FFS3 Uncharacterized protein2.00e-1145.52Show/hide
Query:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP-----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPV
        VLLALIA+ +LGQAP +AP  SP  SSP  +PKS+P           PP+ +TPPSS+P              S P  +P SSPPAPPT P+ +P   P 
Subjt:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP-----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPV

Query:  PSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        P+SSIS PPA  P+   +P S A +NR+ V GS +  V+++A LL
Subjt:  PSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

A0A1R3JNL7 Putative Serineaspartate repeat-containing protein I2.76e-1046.53Show/hide
Query:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVP
        VLLALIA+ +LGQ P +AP  SP  SSP  +PK+AP          PPT ATPP+S+P             TS P  +P SSPPAPPTAP+ +P    +P
Subjt:  VLLALIAA-SLGQAPGAAPASSPTKSSPASSPKSAP----------PPTVATPPSSSPLAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVP

Query:  SSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        + SIS  P    SPTS+P S A +NR+A++GS++  + +SALL+
Subjt:  SSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

A0A2I4FQK5 classical arabinogalactan protein 10-like6.78e-1850.7Show/hide
Query:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP-LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVPSS
        S FV+++LL AL+A S   QAPG AP  SPTKS PASSPK+APPPT  + P+ SP ++P   APAP ++ +PP  AP+SSPPAPPT+P+ +P + P    
Subjt:  SAFVFVVLL-ALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP-LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVPSS

Query:  SISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        SIS PP+ + SPT +PG+GA +N ++V+GS+ + ++++ LL+
Subjt:  SISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

A0A5N6RKA1 Uncharacterized protein2.66e-1250.66Show/hide
Query:  SAFVFVVLLALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATP-----PSSSP-LAPSGVAPAPFTAT----SPPAMAP-ASSPPAPPTA-PSD
        S+FV ++L+AL+A+S L Q P AAP +SPTKS P S+P +A PPT A P     P+SSP ++P    PAP  AT    SP A +P ASSPPAPPT+ P +
Subjt:  SAFVFVVLLALIAAS-LGQAPGAAPASSPTKSSPASSPKSAPPPTVATP-----PSSSP-LAPSGVAPAPFTAT----SPPAMAP-ASSPPAPPTA-PSD

Query:  SPMITPVPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        S      P S I  PP    SPTSTPGS A +NR+A +GS+ +A++++ALLL
Subjt:  SPMITPVPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

A0A6J1FFR5 lysine-rich arabinogalactan protein 19-like4.30e-5382.19Show/hide
Query:  MASSSAFVFVVLLALIAASLGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITP
        MASSSAFVFVVL+ALIA SLGQAPGAAPASSPTKS P SSPKSAP PTVATPP+SSP   LAPSG AP+P T TSPPAM+PA+SPPAPPTAPS+SP  TP
Subjt:  MASSSAFVFVVLLALIAASLGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSP---LAPSGVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITP

Query:  VPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL
        VP+ SIS PPALAPSP STPG+G  VNRIAVSGSII AVISSALLL
Subjt:  VPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACGCGTGTGTTCATTTATATATATACACACACACACACATTATATATAGGTATAAGCCATTGCAGAACCCTTCTCTTCTCTCATCTTCAACCTCTTCACCTCAAACTTC
TCTCTTTTCTCTTCTCTTCCCATTCTTCTTCACCACCATGGCTTCCTCCTCTGCCTTCGTCTTCGTCGTTCTCTTAGCTTTAATAGCCGCCTCTCTTGGCCAAGCTCCGG
GCGCCGCACCGGCCTCTTCTCCAACCAAATCGTCCCCAGCCTCCTCTCCTAAATCTGCACCTCCACCAACAGTGGCGACTCCTCCATCATCTTCACCCCTTGCTCCGTCC
GGCGTTGCTCCCGCTCCTTTCACCGCAACTTCACCACCAGCTATGGCTCCGGCTTCTTCTCCACCAGCTCCACCTACTGCTCCTTCCGACTCACCAATGATCACTCCAGT
TCCATCTTCTTCCATCTCAAACCCTCCTGCACTGGCTCCGTCGCCAACATCCACTCCTGGAAGTGGCGCTTTCGTGAACAGAATCGCCGTCTCTGGATCTATCATAGCTG
CTGTAATTTCCTCCGCTCTACTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CACGCGTGTGTTCATTTATATATATACACACACACACACATTATATATAGGTATAAGCCATTGCAGAACCCTTCTCTTCTCTCATCTTCAACCTCTTCACCTCAAACTTC
TCTCTTTTCTCTTCTCTTCCCATTCTTCTTCACCACCATGGCTTCCTCCTCTGCCTTCGTCTTCGTCGTTCTCTTAGCTTTAATAGCCGCCTCTCTTGGCCAAGCTCCGG
GCGCCGCACCGGCCTCTTCTCCAACCAAATCGTCCCCAGCCTCCTCTCCTAAATCTGCACCTCCACCAACAGTGGCGACTCCTCCATCATCTTCACCCCTTGCTCCGTCC
GGCGTTGCTCCCGCTCCTTTCACCGCAACTTCACCACCAGCTATGGCTCCGGCTTCTTCTCCACCAGCTCCACCTACTGCTCCTTCCGACTCACCAATGATCACTCCAGT
TCCATCTTCTTCCATCTCAAACCCTCCTGCACTGGCTCCGTCGCCAACATCCACTCCTGGAAGTGGCGCTTTCGTGAACAGAATCGCCGTCTCTGGATCTATCATAGCTG
CTGTAATTTCCTCCGCTCTACTTCTTTAA
Protein sequenceShow/hide protein sequence
HACVHLYIYTHTHIIYRYKPLQNPSLLSSSTSSPQTSLFSLLFPFFFTTMASSSAFVFVVLLALIAASLGQAPGAAPASSPTKSSPASSPKSAPPPTVATPPSSSPLAPS
GVAPAPFTATSPPAMAPASSPPAPPTAPSDSPMITPVPSSSISNPPALAPSPTSTPGSGAFVNRIAVSGSIIAAVISSALLL