; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13539 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13539
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMADS-box transcription factor 23-like isoform X2
Genome locationctg1838:8650319..8652149
RNA-Seq ExpressionCucsat.G13539
SyntenyCucsat.G13539
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022940463.1 MADS-box transcription factor 23-like isoform X1 [Cucurbita moschata]5.52e-0877.5Show/hide
Query:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        F+SHY NLVL MVAADYN ASKKRPYT  NQED+++FASR
Subjt:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
XP_022940464.1 MADS-box transcription factor 23-like isoform X2 [Cucurbita moschata]5.16e-0877.5Show/hide
Query:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        F+SHY NLVL MVAADYN ASKKRPYT  NQED+++FASR
Subjt:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
XP_023525011.1 MADS-box transcription factor 23-like isoform X1 [Cucurbita pepo subsp. pepo]1.04e-0775Show/hide
Query:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        F+S Y NLVL MVAADYNYASKKRPYT  NQED+++F SR
Subjt:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
XP_023525012.1 MADS-box transcription factor 23-like isoform X2 [Cucurbita pepo subsp. pepo]1.79e-1348.89Show/hide
Query:  MDLVLERMQAYLLTFNSASHNNKTMRHQKELQNWGKIMKRSVNNEFKRTFFRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        M  V ERMQ YL  FNSA+HNNKT+RHQK+ QNW                              ADYNYASKKRPYT  NQED+++F SR
Subjt:  MDLVLERMQAYLLTFNSASHNNKTMRHQKELQNWGKIMKRSVNNEFKRTFFRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
TrEMBL top hitse value%identityAlignment
A0A6J1FK75 MADS-box transcription factor 23-like isoform X22.50e-0877.5Show/hide
Query:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        F+SHY NLVL MVAADYN ASKKRPYT  NQED+++FASR
Subjt:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
A0A6J1FPC1 MADS-box transcription factor 23-like isoform X12.67e-0877.5Show/hide
Query:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
        F+SHY NLVL MVAADYN ASKKRPYT  NQED+++FASR
Subjt:  FRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTAGTGTTGGAGAGGATGCAGGCATACCTATTAACCTTCAACTCAGCCAGCCACAACAACAAGACAATGAGGCACCAGAAAGAGCTACAAAACTGGGGTAAAAT
TATGAAAAGATCCGTAAACAATGAATTCAAACGAACTTTTTTCCGTAGCCACTATTTCAATCTTGTTCTTTTCATGGTTGCAGCAGACTACAACTACGCTAGCAAAAAGA
GACCTTACACCAAGATCAACCAGGAAGATATTTCTTATTTTGCATCAAGAAACGGTGTAAGGTTGCAAATTATCTTTCAATCAACATTAGAGAGACGTCTATTCCATACC
AAAAGAAACCAGCTTTGTCTAGTTTGTGGTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTAGTGTTGGAGAGGATGCAGGCATACCTATTAACCTTCAACTCAGCCAGCCACAACAACAAGACAATGAGGCACCAGAAAGAGCTACAAAACTGGGGTAAAAT
TATGAAAAGATCCGTAAACAATGAATTCAAACGAACTTTTTTCCGTAGCCACTATTTCAATCTTGTTCTTTTCATGGTTGCAGCAGACTACAACTACGCTAGCAAAAAGA
GACCTTACACCAAGATCAACCAGGAAGATATTTCTTATTTTGCATCAAGAAACGGTGTAAGGTTGCAAATTATCTTTCAATCAACATTAGAGAGACGTCTATTCCATACC
AAAAGAAACCAGCTTTGTCTAGTTTGTGGTGATTAA
Protein sequenceShow/hide protein sequence
MDLVLERMQAYLLTFNSASHNNKTMRHQKELQNWGKIMKRSVNNEFKRTFFRSHYFNLVLFMVAADYNYASKKRPYTKINQEDISYFASRNGVRLQIIFQSTLERRLFHT
KRNQLCLVCGD