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Cucsat.G13565 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13565
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome maturation factor
Genome locationctg1838:9258523..9260231
RNA-Seq ExpressionCucsat.G13565
SyntenyCucsat.G13565
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136199.1 uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]8.92e-10599.37Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466004.1 PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]2.63e-10297.5Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQLAEIKAD G ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466005.1 PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo]7.00e-10096.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKAD G ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_011652641.1 uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]3.35e-107100Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_038888243.1 uncharacterized protein LOC120078100 [Benincasa hispida]1.06e-9290.06Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDE PADDQKRKKHSPSSSSI NY GQDDD++SKSFRFSFPSP PPRQEK VHAIPILTIICFLILY  SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSL--KSRPPRKLADF
        QFHGFK P++QL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSL  KSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSL--KSRPPRKLADF
TrEMBL top hitse value%identityAlignment
A0A0A0LE94 Uncharacterized protein4.32e-10599.37Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQ78 uncharacterized protein LOC103503567 isoform X11.28e-10297.5Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQLAEIKAD G ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQJ2 uncharacterized protein LOC103503567 isoform X23.39e-10096.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKAD G ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A5A7T6T2 Uncharacterized protein3.39e-10096.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKAD G ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKAD-GDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A6J1HI49 uncharacterized protein LOC111463852 isoform X13.35e-9187.42Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD+ P  DQKRKKHSPSSSSI+ Y GQDD+K SKSFRFSFPSPSPPRQE LVHAIPILT+ICFLILYI SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PS+QLAEIKADGDELI+PK+GNI+AIQSFRNLKEIEKS SLKSR PRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35470.1 unknown protein2.1e-2447.98Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSP-SSSSILNYGGQDDDKSSKSFR----FSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSH
        MQR SL S  SKLH +G G K D    DD K    SP SSSS ++Y    DD   K F+     S  SP   +  +QEKLVH IPILT+ICF+ILY+ S+
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSP-SSSSILNYGGQDDDKSSKSFR----FSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSH

Query:  SPSQSDLAQFHGFKHPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF
        +PSQSDLAQF+GF  PS+ L     +GDE+    + + L+I+ S RNL+E E S++ KS P      RK ADF
Subjt:  SPSQSDLAQFHGFKHPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCC
ATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTC
ACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAA
CAATTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTC
TCTTAAATCTCGCCCTCCGCGGAAACTCGCCGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCC
ATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTC
ACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAA
CAATTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTC
TCTTAAATCTCGCCCTCCGCGGAAACTCGCCGATTTCTAA
Protein sequenceShow/hide protein sequence
MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQ
QLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF