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Cucsat.G13612 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13612
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCDT1-like protein b
Genome locationctg1838:4420075..4420753
RNA-Seq ExpressionCucsat.G13612
SyntenyCucsat.G13612
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0000278 - mitotic cell cycle (biological process)
GO:0030174 - regulation of DNA-dependent DNA replication initiation (biological process)
GO:0071163 - DNA replication preinitiation complex assembly (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646176.1 hypothetical protein Csa_016825 [Cucumis sativus]1.06e-3260Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T+  KP+LHISFNFGVL  ++KE+ Y QLRKLFR +LSEF+      DDVP       FNFR+Q++++K+  LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
        S NH+SEENQGF I+
Subjt:  SSNHNSEENQGFPII

XP_008447443.1 PREDICTED: CDT1-like protein a, chloroplastic [Cucumis melo]1.69e-3262.61Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        VFDE T+  KP+LHISFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
         SNH+ EENQGF II
Subjt:  SSNHNSEENQGFPII

XP_031739146.1 CDT1-like protein a, chloroplastic [Cucumis sativus]1.06e-67100Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGF
        VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGF
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGF

Query:  PII
        PII
Subjt:  PII

XP_031744900.1 uncharacterized protein LOC105436135 isoform X1 [Cucumis sativus]1.47e-3560Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T+  KP+LHISFNFGVL  ++KE+ Y QLRKLFR +LSEF+      DDVP       FNFR+Q++++K+  LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
        S NH+SEENQGF I+
Subjt:  SSNHNSEENQGFPII

XP_031744901.1 CDT1-like protein a, chloroplastic isoform X2 [Cucumis sativus]9.71e-3660Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T+  KP+LHISFNFGVL  ++KE+ Y QLRKLFR +LSEF+      DDVP       FNFR+Q++++K+  LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
        S NH+SEENQGF I+
Subjt:  SSNHNSEENQGFPII

TrEMBL top hitse value%identityAlignment
A0A1S3BGW9 CDT1-like protein a, chloroplastic8.17e-3362.61Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        VFDE T+  KP+LHISFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
         SNH+ EENQGF II
Subjt:  SSNHNSEENQGFPII

A0A1S3CEP6 CDT1-like protein b1.53e-3159.13Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T   KP+LHISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
          NH+SEENQGF I+
Subjt:  SSNHNSEENQGFPII

A0A5A7T8X4 CDT1-like protein a8.17e-3362.61Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        VFDE T+  KP+LHISFNF +L  +SKE+ Y QLRKLFR +LSEF      IDDVP       FNFR+Q+L  KT  LS VKTSIEQL P QPMPSA+G+
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEF------IDDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
         SNH+ EENQGF II
Subjt:  SSNHNSEENQGFPII

A0A5D3BZJ0 CDT1-like protein b1.53e-3159.13Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T   KP+LHISFNF VL  ++KE+ Y QLRKLFR +LSEF+       DVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFID------DVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
          NH+SEENQGF I+
Subjt:  SSNHNSEENQGFPII

A0A5D3DKW1 CDT1-like protein b2.14e-3158.26Show/hide
Query:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI
        V+DE T   KP+LHISFNFGV   +++E+ Y QLRKLFR +LSEF+      DDVP       FNFR+QDL++K+ +LS +KTSIEQLAP QPMPS +GI
Subjt:  VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFI------DDVPA------FNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGI

Query:  SSNHNSEENQGFPII
        S NH+SEE+QGF ++
Subjt:  SSNHNSEENQGFPII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCTTTGATGAGTGTACCAACTGGAAGAAGCCAGAACTTCATATATCTTTCAATTTTGGTGTCCTAGCTGTAGACAGTAAGGAAAACCATTATACGCAATTGAGGAAGTT
GTTTAGGATACAGCTTTCAGAATTTATTGATGACGTTCCAGCATTCAATTTCAGAACCCAAGATCTTCTCTCAAAAACCAAGACGTTATCTTATGTCAAGACATCAATTG
AGCAACTAGCGCCTGGGCAACCAATGCCATCAGCAAAAGGCATTTCCTCTAATCATAATTCAGAAGAAAATCAAGGTTTCCCAATAATT
mRNA sequenceShow/hide mRNA sequence
GTCTTTGATGAGTGTACCAACTGGAAGAAGCCAGAACTTCATATATCTTTCAATTTTGGTGTCCTAGCTGTAGACAGTAAGGAAAACCATTATACGCAATTGAGGAAGTT
GTTTAGGATACAGCTTTCAGAATTTATTGATGACGTTCCAGCATTCAATTTCAGAACCCAAGATCTTCTCTCAAAAACCAAGACGTTATCTTATGTCAAGACATCAATTG
AGCAACTAGCGCCTGGGCAACCAATGCCATCAGCAAAAGGCATTTCCTCTAATCATAATTCAGAAGAAAATCAAGGTTTCCCAATAATT
Protein sequenceShow/hide protein sequence
VFDECTNWKKPELHISFNFGVLAVDSKENHYTQLRKLFRIQLSEFIDDVPAFNFRTQDLLSKTKTLSYVKTSIEQLAPGQPMPSAKGISSNHNSEENQGFPII