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Cucsat.G13698 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13698
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationctg184:1115566..1116507
RNA-Seq ExpressionCucsat.G13698
SyntenyCucsat.G13698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]2.07e-3767.92Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYN VIVVIQGK  ISWLDMQS+LLIFEKRL+H N+Q+N GNIVQN  INMA+  ++NE   +  HQ HGN RNNF G RGG  N RG  RGR 
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQ
        +K TCQ
Subjt:  NKPTCQ

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.12e-3366.04Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYN VI VIQGK  ISW+DMQSELL FEKRLEH +TQ+NT NI+QNV +N+A+  +S++    + HQ HGN RNN  GQRGG   GRGR +GR 
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQ
        NKPTCQ
Subjt:  NKPTCQ

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]3.09e-2657.8Show/hide
Query:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN
        GLDEVYNLVIVVIQGK +ISWLDMQS+LLIFEKRL+H NTQ+ NTGNI Q+ A+NMA++F+ N   + +  + +G  R +FSGQRG   NG         
Subjt:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN

Query:  KPTCQAWGQ
         PTCQ  G+
Subjt:  KPTCQAWGQ

XP_031739914.1 uncharacterized protein LOC116403326 isoform X1 [Cucumis sativus]4.22e-7596.69Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYNLVIVVIQGK NISWLDMQSELLIFEK LEHHNTQRNTGNIVQNVAINMAKKFSSNES SNNGHQLHGNIRNNFSGQRGGPYNGRGR RGRD
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQAWGQSYKGNIADRNS
        NKPTCQAWGQSYKGNIADRNS
Subjt:  NKPTCQAWGQSYKGNIADRNS

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]3.84e-6596.3Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYNLVIVVIQGK NISWLDMQSELLIFEK LEHHNTQRNTGNIVQNVAINMAKKFSSNES SNNGHQLHGNIRNNFSGQRGGPYNGRGR RGRD
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQAW
        NKPTCQAW
Subjt:  NKPTCQAW

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein1.00e-3767.92Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYN VIVVIQGK  ISWLDMQS+LLIFEKRL+H N+Q+N GNIVQN  INMA+  ++NE   +  HQ HGN RNNF G RGG  N RG  RGR 
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQ
        +K TCQ
Subjt:  NKPTCQ

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X12.45e-2657.8Show/hide
Query:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN
        GLDEVYNLVIVVIQGK +ISWLDMQS+LLIFEKRL+H NTQ+ NTGNI Q+ A+NMA++F+ N   + +  + +G  R +FSGQRG   NG         
Subjt:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN

Query:  KPTCQAWGQ
         PTCQ  G+
Subjt:  KPTCQAWGQ

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.50e-2657.8Show/hide
Query:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN
        GLDEVYNLVIVVIQGK +ISWLDMQS+LLIFEKRL+H NTQ+ NTGNI Q+ A+NMA++F+ N   + +  + +G  R +FSGQRG   NG         
Subjt:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN

Query:  KPTCQAWGQ
         PTCQ  G+
Subjt:  KPTCQAWGQ

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X51.56e-2659.05Show/hide
Query:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN
        GLDEVYNLVIVVIQGK +ISWLDMQS+LLIFEKRL+H NTQ+ NTGNI Q+ A+NMA++F+ N   + +  + +G  R +FSGQRG   NG         
Subjt:  GLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQR-NTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDN

Query:  KPTCQ
         PTCQ
Subjt:  KPTCQ

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-944.42e-3366.04Show/hide
Query:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD
        LLGLDEVYN VI VIQGK  ISW+DMQSELL FEKRLEH +TQ+NT NI+QNV +N+A+  +S++    + HQ HGN RNN  GQRGG   GRGR +GR 
Subjt:  LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRD

Query:  NKPTCQ
        NKPTCQ
Subjt:  NKPTCQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGTTGGGATTAGATGAAGTATACAATCTGGTGATTGTTGTGATTCAAGGAAAATCGAACATATCATGGTTGGATATGCAATCTGAGCTTTTGATTTTTGAGAAAAGGTT
GGAGCATCATAATACTCAAAGAAATACTGGCAACATAGTCCAAAATGTAGCTATCAACATGGCTAAAAAATTCAGTTCAAATGAATCCCACTCCAATAATGGCCATCAAT
TACATGGAAACATCAGGAACAATTTCAGTGGACAAAGAGGAGGTCCCTACAATGGCAGAGGACGCTGGCGAGGTCGCGATAACAAGCCAACATGCCAAGCTTGGGGACAG
AGCTATAAGGGAAACATTGCTGATAGGAACTCTTAA
mRNA sequenceShow/hide mRNA sequence
CTGTTGGGATTAGATGAAGTATACAATCTGGTGATTGTTGTGATTCAAGGAAAATCGAACATATCATGGTTGGATATGCAATCTGAGCTTTTGATTTTTGAGAAAAGGTT
GGAGCATCATAATACTCAAAGAAATACTGGCAACATAGTCCAAAATGTAGCTATCAACATGGCTAAAAAATTCAGTTCAAATGAATCCCACTCCAATAATGGCCATCAAT
TACATGGAAACATCAGGAACAATTTCAGTGGACAAAGAGGAGGTCCCTACAATGGCAGAGGACGCTGGCGAGGTCGCGATAACAAGCCAACATGCCAAGCTTGGGGACAG
AGCTATAAGGGAAACATTGCTGATAGGAACTCTTAA
Protein sequenceShow/hide protein sequence
LLGLDEVYNLVIVVIQGKSNISWLDMQSELLIFEKRLEHHNTQRNTGNIVQNVAINMAKKFSSNESHSNNGHQLHGNIRNNFSGQRGGPYNGRGRWRGRDNKPTCQAWGQ
SYKGNIADRNS