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Cucsat.G1372 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1372
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLOB domain-containing protein
Genome locationctg1:12479513..12480075
RNA-Seq ExpressionCucsat.G1372
SyntenyCucsat.G1372
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]1.28e-6494.06Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]1.76e-68100Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]1.92e-6798.02Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]5.63e-6696.04Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]4.47e-6595.05Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein8.52e-69100Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

A0A0A0LLX6 LOB domain-containing protein1.27e-5786.14Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR EAAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

A0A1S3AY36 LOB domain-containing protein 24-like9.30e-6898.02Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR EAAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

A0A6J1E5I6 LOB domain-containing protein 24-like1.46e-6393.07Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAE+L FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

A0A6J1JCD0 LOB domain-containing protein 24-like2.72e-6696.04Show/hide
Query:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Query:  T
        T
Subjt:  T

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 231.9e-3567.01Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT

P59468 LOB domain-containing protein 241.9e-3567.01Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT

Q32SG3 LOB domain-containing protein 63.3e-2754.74Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK
        CAACK+LRR+C  DC+F+P+FP +NPQ+F  VHR++GASNV K L++L    R +A  +L +EA  R+ DPVYGCVG+IS LQH L   +  LA+
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAK

Q8LBW3 LOB domain-containing protein 121.6e-2956.7Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L+FEA  R+ DPVYGCVG IS LQ+++   + QLA
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA

Q9SHE9 LOB domain-containing protein 42.1e-2957.45Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++++EA  R+ DPVYGCVG IS LQ ++ V + QLA
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 41.5e-3057.45Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA
        CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++++EA  R+ DPVYGCVG IS LQ ++ V + QLA
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein1.1e-3056.7Show/hide
Query:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA
        S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L+FEA  R+ DPVYGCVG IS LQ+++   + QLA
Subjt:  SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLA

AT3G26620.1 LOB domain-containing protein 231.4e-3667.01Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT

AT3G26660.1 LOB domain-containing protein 241.4e-3667.01Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT
        RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ ++   + +LAKT
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKT

AT3G27650.1 LOB domain-containing protein 253.1e-2845.61Show/hide
Query:  ILSNNIYSIWIFSMISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQL
        +++ ++  I++ +  +  CAACK+LRR+C SDC+F+P+FP   P +F  VHRI+GASNV+K LH++  H R +A  +L +EA+ R++DPVYGCVG IS L
Subjt:  ILSNNIYSIWIFSMISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQL

Query:  QHELHVAETQLAKT
        Q ++   + +L +T
Subjt:  QHELHVAETQLAKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTCTTCCAAAATCTTGATCTTGTCAAATAATATATATTCAATTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGCCCTTC
CGATTGTATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTA
CACATTTAAGAGCAGAAGCAGCAGAAACTTTAATTTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATGAATTA
CACGTGGCAGAAACCCAGTTGGCCAAAACT
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCCAAAATCTTGATCTTGTCAAATAATATATATTCAATTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAGTATTTAAGAAGAAGATGCCCTTC
CGATTGTATTTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTA
CACATTTAAGAGCAGAAGCAGCAGAAACTTTAATTTTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATGAATTA
CACGTGGCAGAAACCCAGTTGGCCAAAACT
Protein sequenceShow/hide protein sequence
LSSKILILSNNIYSIWIFSMISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHEL
HVAETQLAKT