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Cucsat.G13733 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13733
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionsignal recognition particle 19 kDa protein
Genome locationctg184:1756809..1758892
RNA-Seq ExpressionCucsat.G13733
SyntenyCucsat.G13733
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582147.1 Signal recognition particle 19 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]6.73e-6293.94Show/hide
Query:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        E GWNMDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI S K
Subjt:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]3.98e-6598.99Show/hide
Query:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITS K
Subjt:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]4.04e-6198.94Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

XP_022138272.1 signal recognition particle 19 kDa protein [Momordica charantia]1.91e-5995.74Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]1.30e-5996.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

TrEMBL top hitse value%identityAlignment
A0A0A0L2H8 Uncharacterized protein9.89e-78100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSKASSCLF
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSKASSCLF
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSKASSCLF

Query:  GPFSSLGKKTSIYN
        GPFSSLGKKTSIYN
Subjt:  GPFSSLGKKTSIYN

A0A0A0L5F9 Uncharacterized protein2.32e-6093.94Show/hide
Query:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        EFG NMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITS K
Subjt:  EFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

A0A1S3AYC2 signal recognition particle 19 kDa protein5.16e-5995.74Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

A0A6J1CAM2 signal recognition particle 19 kDa protein9.23e-6095.74Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

A0A6J1IY39 signal recognition particle 19 kDa protein5.16e-5995.74Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI S K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein6.9e-1751.11Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      S K+
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA

P49964 Signal recognition particle 19 kDa protein2.0e-3269.32Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTCVEI DCC HLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI + K
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

Q3ZBG7 Signal recognition particle 19 kDa protein5.3e-1751.11Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      S K+
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA

Q5RBR1 Signal recognition particle 19 kDa protein6.9e-1751.11Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      S K+
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSSKA

Q943Z6 Signal recognition particle 19 kDa protein4.9e-3977.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative3.5e-4077.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITS K
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCACCTTCATCTTACTCTTCCAAGTCTTCCATCTCCGTCGTCTCGTCTGTCCGACATCCGGTTTCAGTCTCTCTGATCGTCACGGTTTCAGCTGTTCTTCATTCTGTGA
GGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACGATTGCTGAAGGAAGACGTATAG
GTGTTAGCAAAGCATGCGAGAATCCTACGTGTGTTGAGATCGGGGATTGCTGCGGTCATCTCAAACTTCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTC
ATGCAAAGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGTAAGGCTTCTAGTTGTCTCTTTGGACCCTTTTCATC
CCTTGGAAAAAAGACTTCTATTTATAACTGA
mRNA sequenceShow/hide mRNA sequence
CCCACCTTCATCTTACTCTTCCAAGTCTTCCATCTCCGTCGTCTCGTCTGTCCGACATCCGGTTTCAGTCTCTCTGATCGTCACGGTTTCAGCTGTTCTTCATTCTGTGA
GGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACGATTGCTGAAGGAAGACGTATAG
GTGTTAGCAAAGCATGCGAGAATCCTACGTGTGTTGAGATCGGGGATTGCTGCGGTCATCTCAAACTTCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTC
ATGCAAAGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGTAAGGCTTCTAGTTGTCTCTTTGGACCCTTTTCATC
CCTTGGAAAAAAGACTTCTATTTATAACTGA
Protein sequenceShow/hide protein sequence
PTFILLFQVFHLRRLVCPTSGFSLSDRHGFSCSSFCEEFGWNMDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDF
MQRGRVRVLLKKEDGTLSNPAITSSKASSCLFGPFSSLGKKTSIYN