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Cucsat.G13742 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13742
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description30S ribosomal protein S31, chloroplastic
Genome locationctg184:2032803..2036187
RNA-Seq ExpressionCucsat.G13742
SyntenyCucsat.G13742
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147884.1 30S ribosomal protein S31, chloroplastic [Cucumis sativus]1.13e-74100Show/hide
Query:  MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDNEKIKIEIDESLFGS
        FDDNEKIKIEIDESLFGS
Subjt:  FDDNEKIKIEIDESLFGS

XP_008449316.1 PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo]4.66e-6890.98Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQSP     +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

XP_022151467.1 30S ribosomal protein S31, chloroplastic [Momordica charantia]3.44e-6085.12Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQSP    RFFSFSKSE LGTSLRAS TASLA S  SSPSS+PA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFG
        RKDKF+D+EKIKIEID+SLF 
Subjt:  RKDKFDDNEKIKIEIDESLFG

XP_023517799.1 30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo]2.25e-5680.99Show/hide
Query:  MASLPFGLLQA----PSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA    P+ SPR FSFSKSE LGTSLR S+     IS  SSPSSIPA+YCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQA----PSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFG
        RKDKFDD+EKIKIEIDESLF 
Subjt:  RKDKFDDNEKIKIEIDESLFG

XP_038882305.1 30S ribosomal protein S31, chloroplastic [Benincasa hispida]3.53e-6386.89Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQSP    RFFSFSKSE LGTSLRASSTASLA ST SSPSSIPA+YCGRGDKKTE+GKRFN SYGNARPR+KTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKF+D+EKIKIEIDESLF +
Subjt:  RKDKFDDNEKIKIEIDESLFGS

TrEMBL top hitse value%identityAlignment
A0A0A0KXY4 Uncharacterized protein5.47e-75100Show/hide
Query:  MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
        MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK
Subjt:  MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDK

Query:  FDDNEKIKIEIDESLFGS
        FDDNEKIKIEIDESLFGS
Subjt:  FDDNEKIKIEIDESLFGS

A0A1S3BL51 30S ribosomal protein S31, chloroplastic2.26e-6890.98Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQSP     +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

A0A5A7TU27 30S ribosomal protein S312.26e-6890.98Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        M SLPFGLLQAPSQSP     +FSFSKSE LGTSLRASSTASLAISTPSSPSSIPA+YCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFGS
        RKDKFDD+EKIKIEIDESLF S
Subjt:  RKDKFDDNEKIKIEIDESLFGS

A0A6J1DDL3 30S ribosomal protein S31, chloroplastic1.66e-6085.12Show/hide
Query:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA SQSP    RFFSFSKSE LGTSLRAS TASLA S  SSPSS+PA+YCGRGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PP
Subjt:  MASLPFGLLQAPSQSP----RFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFG
        RKDKF+D+EKIKIEID+SLF 
Subjt:  RKDKFDDNEKIKIEIDESLFG

A0A6J1HRX4 30S ribosomal protein S31, chloroplastic6.29e-5680.17Show/hide
Query:  MASLPFGLLQA----PSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP
        MASLPFGLLQA    P+ SPR FSFSKSE LGTSLR S+      S  SSPSSIPA+YCGRGDKKTE+GKRF HS+GNARPRDKTKGRGTPRVPTPPSPP
Subjt:  MASLPFGLLQA----PSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPP

Query:  RKDKFDDNEKIKIEIDESLFG
        RKDKFDD+EKIKIEIDESLF 
Subjt:  RKDKFDDNEKIKIEIDESLFG

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic1.6e-2665.66Show/hide
Query:  SFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
        S S SE  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Subjt:  SFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS

P47909 30S ribosomal protein S31, mitochondrial3.5e-0555.56Show/hide
Query:  PSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP
        P   +   A+ CGRGDKKT+RGKRF  SYGNARP R+K   R   RV  P S P
Subjt:  PSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARP-RDKTKGRGTPRVPTPPSPP

P47910 30S ribosomal protein S31, chloroplastic8.3e-1551.43Show/hide
Query:  MASLPFGLLQAPSQSPR--FFSFSKSEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPR
        MASL   LL  PS +     FSFS S+++ G SL +  T SL+ S  +SP ++P IYCGRGD+KT +GKRFNHS+GNARP++K KGRG P+ P  P    
Subjt:  MASLPFGLLQAPSQSPR--FFSFSKSEAL-GTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPR

Query:  KDKFD
          K D
Subjt:  KDKFD

Arabidopsis top hitse value%identityAlignment
AT2G38140.1 plastid-specific ribosomal protein 41.1e-2765.66Show/hide
Query:  SFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS
        S S SE  G SL +  T   ++ST SS SSIP +YCGRGD+KT +GKRFNHS+GNARPR+K+KGRG  RVP PP+PPRKDKF+++EKIKI+IDESLF +
Subjt:  SFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIEIDESLFGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATCTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGC
TTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAA
ATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAG
ATTGACGAGTCTCTTTTTGGTAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTCTTCCTTTCGGACTTCTTCAGGCTCCATCTCAATCTCCTCGTTTCTTCTCTTTCTCCAAATCTGAAGCCCTAGGAACATCTCTTCGTGCTTCTTCTACCGC
TTCTCTTGCAATCTCTACACCTTCATCTCCTTCTTCAATTCCTGCTATATATTGTGGCAGAGGCGATAAGAAAACGGAGAGAGGAAAGCGGTTCAATCATTCGTATGGAA
ATGCAAGGCCTCGGGACAAGACCAAGGGGAGAGGGACTCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGATAAATTTGACGACAATGAGAAAATCAAGATCGAG
ATTGACGAGTCTCTTTTTGGTAGCTAG
Protein sequenceShow/hide protein sequence
MASLPFGLLQAPSQSPRFFSFSKSEALGTSLRASSTASLAISTPSSPSSIPAIYCGRGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDNEKIKIE
IDESLFGS