; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13807 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13807
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionheterogeneous nuclear ribonucleoprotein F
Genome locationctg184:755690..759271
RNA-Seq ExpressionCucsat.G13807
SyntenyCucsat.G13807
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041416.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.05e-183100Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN

Query:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

TYJ96136.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]4.64e-183100Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN

Query:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

XP_004142112.1 heterogeneous nuclear ribonucleoprotein F [Cucumis sativus]1.89e-190100Show/hide
Query:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
        MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
Subjt:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF

Query:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
        CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
Subjt:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED

Query:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

XP_022986707.1 heterogeneous nuclear ribonucleoprotein F-like [Cucurbita maxima]5.83e-18094.96Show/hide
Query:  MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCV
        MFYRG YADGGDGREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYA V+QPPPFPVVRLRGLPFDCMETDVVEFFHGLD+VD+LFVHKNGKFTGEGFCV
Subjt:  MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCV

Query:  LGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI
        LGYPLQ+DFALQRNRQNMGRRYVE+FRSNRQEYYKAVANEVFDA GGSPRR+APRSKL DEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGF LSEDSI
Subjt:  LGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI

Query:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        HLT NSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

XP_038901811.1 heterogeneous nuclear ribonucleoprotein F isoform X1 [Benincasa hispida]6.34e-18999.23Show/hide
Query:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
        MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
Subjt:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF

Query:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
        CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKD AEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
Subjt:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED

Query:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

TrEMBL top hitse value%identityAlignment
A0A0A0L205 RRM domain-containing protein9.17e-191100Show/hide
Query:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
        MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
Subjt:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF

Query:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
        CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
Subjt:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED

Query:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

A0A1S3BMM3 heterogeneous nuclear ribonucleoprotein F9.17e-191100Show/hide
Query:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
        MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF
Subjt:  MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGF

Query:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
        CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED
Subjt:  CVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSED

Query:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

A0A5A7TH86 Heterogeneous nuclear ribonucleoprotein H isoform X15.06e-184100Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN

Query:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

A0A5D3BB71 Heterogeneous nuclear ribonucleoprotein H isoform X12.25e-183100Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLN

Query:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  SEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

A0A6J1J8B6 heterogeneous nuclear ribonucleoprotein F-like2.82e-18094.96Show/hide
Query:  MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCV
        MFYRG YADGGDGREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYA V+QPPPFPVVRLRGLPFDCMETDVVEFFHGLD+VD+LFVHKNGKFTGEGFCV
Subjt:  MFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCV

Query:  LGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI
        LGYPLQ+DFALQRNRQNMGRRYVE+FRSNRQEYYKAVANEVFDA GGSPRR+APRSKL DEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGF LSEDSI
Subjt:  LGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI

Query:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        HLT NSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
Subjt:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F4.2e-2736.68Show/hide
Query:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+F++++ ++ A+ K +  +G RYIE+F SS EE+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F6.1e-2635.68Show/hide
Query:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL
        S P S       D+A + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+F++++ ++ A+ K +  +G RYIE+F SS EE+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL

Q60HC3 Heterogeneous nuclear ribonucleoprotein F4.2e-2736.68Show/hide
Query:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+F++++ ++ A+ K +  +G RYIE+F SS EE+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL

Q794E4 Heterogeneous nuclear ribonucleoprotein F4.6e-2636.18Show/hide
Query:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+F++++ ++ A+ K +  +G RYIE+F SS EE+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F4.6e-2636.18Show/hide
Query:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVVEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+F++++ ++ A+ K +  +G RYIE+F SS EE+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEEL

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-10364.41Show/hide
Query:  MFYRGSYADGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYV--NQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGE
        MFYRG Y DG DGREMG KRQR++DQG    +YG  P SGFMYN  PY +V    PPPFP VRLRGLPFDC E DVVEFFHGLD+VD+LFVH+N K TGE
Subjt:  MFYRGSYADGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYV--NQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGE

Query:  GFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRSAPRSKLNDEVK
         FCVLGYPLQVDFALQ+NRQNMGRRYVE+FRS +QEYYKA+ANEV ++R                                 G SPRR   R++ +D+ K
Subjt:  GFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRSAPRSKLNDEVK

Query:  DSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
        +  EHTG+LRLRGLP+SAGK+DILDFFK F LSED +H+T+N EGRP+GEAFVEF N +DS+AAM KDR TLGSRYIELFPSS EEL+EA+SRGR
Subjt:  DSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

AT4G19610.1 nucleotide binding;nucleic acid binding;RNA binding2.3e-0427.96Show/hide
Query:  VKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPS-GEAFVEFSNEQDSKAAMSK-DRMTLGSRYIELFPSSHEELDE
        V D    TG L +R LPY+A ++++++ F  F    + +HL L+ E + S G A++ +   + +  AM + D  +   R + + P+ H E  +
Subjt:  VKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPS-GEAFVEFSNEQDSKAAMSK-DRMTLGSRYIELFPSSHEELDE

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5947.06Show/hide
Query:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQV
        G  G E+G+KRQR++ Q + Y   GT P S       P+ Y      FPVVRLRGLPF+C + D+ EFF GL+IVD+L V KNGKF+GE F V   P+QV
Subjt:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQV

Query:  DFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLT
        + ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T VL++RGLPYS  K  I++FF G+ + +  + + 
Subjt:  DFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLT

Query:  LNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
           +G+ +GEAFVEF   ++++ AM+KD+M++GSRY+ELFP++ EE   A +R R
Subjt:  LNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.6e-3544.94Show/hide
Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI
        +QV+ ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T VL++RGLPYS  K  I++FF G+ + +  +
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSI

Query:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR
         +    +G+ +GEAFVEF   ++++ AM+KD+M++GSRY+ELFP++ EE   A +R R
Subjt:  HLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGTTCTACCGAGGTTCATACGCTGATGGTGGTGATGGTCGTGAAATGGGTGCAAAGCGTCAAAGGATAGTCGATCAGGGATCTTCTTATTATGGGACTTCTCC
GGGTTCTGGGTTTATGTATAATACAAGTCCGTATGCGTATGTTAATCAGCCTCCACCATTTCCTGTTGTCAGACTACGGGGTTTGCCTTTCGATTGCATGGAAACTGATG
TCGTTGAGTTCTTTCATGGTCTGGACATAGTTGACATTCTTTTCGTCCACAAGAACGGCAAATTCACAGGGGAAGGTTTTTGTGTCTTGGGTTATCCTCTCCAGGTTGAT
TTTGCCCTTCAGAGGAATAGGCAAAACATGGGCAGAAGATATGTTGAGATTTTCAGGAGTAATCGTCAAGAATACTACAAGGCTGTAGCTAATGAAGTTTTTGATGCCCG
GGGTGGGTCACCGAGAAGAAGTGCCCCAAGGTCCAAGTTAAACGATGAGGTGAAAGACTCTGCTGAGCACACCGGTGTATTACGCTTGAGAGGACTGCCATATTCTGCAG
GCAAAGATGACATACTGGACTTCTTCAAAGGTTTCAACTTATCAGAAGACTCAATTCATTTGACACTGAATTCAGAGGGGAGACCAAGTGGGGAAGCATTTGTTGAATTC
TCAAACGAACAAGACTCAAAAGCAGCAATGTCCAAGGATAGAATGACACTAGGTAGCCGCTACATTGAGTTGTTCCCATCATCACATGAAGAATTGGACGAAGCAATCTC
TAGAGGACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGTTCTACCGAGGTTCATACGCTGATGGTGGTGATGGTCGTGAAATGGGTGCAAAGCGTCAAAGGATAGTCGATCAGGGATCTTCTTATTATGGGACTTCTCC
GGGTTCTGGGTTTATGTATAATACAAGTCCGTATGCGTATGTTAATCAGCCTCCACCATTTCCTGTTGTCAGACTACGGGGTTTGCCTTTCGATTGCATGGAAACTGATG
TCGTTGAGTTCTTTCATGGTCTGGACATAGTTGACATTCTTTTCGTCCACAAGAACGGCAAATTCACAGGGGAAGGTTTTTGTGTCTTGGGTTATCCTCTCCAGGTTGAT
TTTGCCCTTCAGAGGAATAGGCAAAACATGGGCAGAAGATATGTTGAGATTTTCAGGAGTAATCGTCAAGAATACTACAAGGCTGTAGCTAATGAAGTTTTTGATGCCCG
GGGTGGGTCACCGAGAAGAAGTGCCCCAAGGTCCAAGTTAAACGATGAGGTGAAAGACTCTGCTGAGCACACCGGTGTATTACGCTTGAGAGGACTGCCATATTCTGCAG
GCAAAGATGACATACTGGACTTCTTCAAAGGTTTCAACTTATCAGAAGACTCAATTCATTTGACACTGAATTCAGAGGGGAGACCAAGTGGGGAAGCATTTGTTGAATTC
TCAAACGAACAAGACTCAAAAGCAGCAATGTCCAAGGATAGAATGACACTAGGTAGCCGCTACATTGAGTTGTTCCCATCATCACATGAAGAATTGGACGAAGCAATCTC
TAGAGGACGGTGA
Protein sequenceShow/hide protein sequence
MNMFYRGSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPFDCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVD
FALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEF
SNEQDSKAAMSKDRMTLGSRYIELFPSSHEELDEAISRGR