; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13860 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13860
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription termination/antitermination protein NusG
Genome locationctg184:1800862..1804891
RNA-Seq ExpressionCucsat.G13860
SyntenyCucsat.G13860
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147896.1 uncharacterized protein LOC101211195 [Cucumis sativus]4.24e-22799.39Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSAS+ETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNG+TATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

XP_008448915.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]4.66e-21594.48Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SAS+ETPAAAADD QQLS R+RRKLRNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEAPN+SALKTDLDTNG+TATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

XP_022151589.1 uncharacterized protein LOC111019492 [Momordica charantia]2.12e-19788.62Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+APN++  KTDLDTNG+TATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIIVET

XP_022931956.1 uncharacterized protein LOC111438223 [Cucurbita moschata]7.39e-19586.81Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+LRNERRE KTT NWREEVEERLC+KPKKEFANWTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVR QEIVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+APN S L+TDLDTNG+TATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

XP_038880828.1 transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida]7.60e-20790.8Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MACGLL+WS +SL S SFPALSFSLSS +RTQLS+SA++ETP+AA DD QQLS RERRKLRNERREIKTTTNWREEVEERLC+KPKKEFA WTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        L+KLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSV+EKRKLKNGTYTV PKA+FPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQ+ APN+SAL+TDLDTNG+TATK KGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

TrEMBL top hitse value%identityAlignment
A0A0A0KZV1 NGN domain-containing protein2.05e-22799.39Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSAS+ETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNG+TATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

A0A1S3BKU2 transcription termination/antitermination protein NusG2.26e-21594.48Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SAS+ETPAAAADD QQLS R+RRKLRNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEAPN+SALKTDLDTNG+TATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLVDLDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

A0A6J1DDH4 uncharacterized protein LOC1110194921.03e-19788.62Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+APN++  KTDLDTNG+TATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIIVET

A0A6J1EV13 uncharacterized protein LOC1114382233.58e-19586.81Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+LRNERRE KTT NWREEVEERLC+KPKKEFANWTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVR QEIVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+APN S L+TDLDTNG+TATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

A0A6J1HQX6 uncharacterized protein LOC1114658891.19e-19386.5Show/hide
Query:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY
        MAC LL W+++SL S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+LRNERRE KTT NWREEVEERLC+KPKKEFANWTEKLNLDY
Subjt:  MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK
        L+KLGPQWWVMRV+RVR QEIVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEK++E+APN S L+T LDTNG+TATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIIVETK
        VTVGFTLFGKETLV LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVDLDIGDIIVETK

SwissProt top hitse value%identityAlignment
P35872 Transcription termination/antitermination protein NusG1.1e-0827.36Show/hide
Query:  RCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEA
        R  A    D  F++  P+ +     + G   V  K +FPG +FI+  +       E  + +R   G+ GFVGA +        +P P+S  ++  I + +
Subjt:  RCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEA

Query:  KDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI
                   L K  +EAP                        KA      G  VRV SG FA+F G++ ++N + GKV V  T+FG+ET V+LD   +
Subjt:  KDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI

Query:  I
        +
Subjt:  I

P65591 Transcription termination/antitermination protein NusG1.4e-0822.02Show/hide
Query:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++         Q  +EK                            PK  V     G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

P65592 Transcription termination/antitermination protein NusG1.4e-0822.02Show/hide
Query:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++         Q  +EK                            PK  V     G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Q06795 Transcription termination/antitermination protein NusG1.7e-0926.05Show/hide
Query:  WWVMRVARVRSQEIVERL-ARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKP
        W+V+        ++   L  R  +    D  F++  P  +E+  +KNG   V  K VFPG V +  VM  +    +R   GV GFVG+         +KP
Subjt:  WWVMRVARVRSQEIVERL-ARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKP

Query:  KPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFT
         P+   + E I K    ++ + D  F  KE                                       TV+V  G FA F GS+++++    KV V   
Subjt:  KPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFT

Query:  LFGKETLVDLDIGDI
        +FG+ET V+L+   I
Subjt:  LFGKETLVDLDIGDI

Q9HWC4 Transcription termination/antitermination protein NusG8.4e-0920.18Show/hide
Query:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V+       + ++  L   +     + +F       +E  +++NG    + +  FPG V ++  MN+     +++   V GF+G          
Subjt:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        +KP P+++ + +AI +   D  +                                  K +PK       PG TVRV  G FA+F G ++++N +  ++ V
Subjt:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ T V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Arabidopsis top hitse value%identityAlignment
AT3G09210.1 plastid transcriptionally active 139.3e-8851.91Show/hide
Query:  GLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAK
        GLL WS  SL  + +  ++       +TQ S++A +       +   QL+ +ERR+LRNERRE K   +WREEVEE+L +KPKK +A WTE+LNLD LA+
Subjt:  GLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAK

Query:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
         GPQWW +RV+R+R  E  + LAR LAR +P+++F +Y PSV+ KRKLKNG+ +V PK VFPG +FIRC++NKEIHD IR+ DGVGGF+G+KVGNTKRQI
Subjt:  LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLE--KEQEEA-----------PNTSALKTDLDT-------NGSTATKHKGRPKKAVNTLSPGSTVRVASGT
        NKP+PV ++D+EAIFK+AK+ QE+ D  F E  + +EEA            N+  ++T  ++         + AT+ K + KK    L+ GSTVRV SGT
Subjt:  NKPKPVSEADMEAIFKEAKDEQERHDQAFLE--KEQEEA-----------PNTSALKTDLDT-------NGSTATKHKGRPKKAVNTLSPGSTVRVASGT

Query:  FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVE
        FAEF G+LKKLNRK+ K TVGFTLFGKETLV++DI +++ E
Subjt:  FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGTGGGCTTCTGGTTTGGAGCTCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCCGTCTCCGC
CTCCATCGAAACCCCCGCCGCCGCCGCTGACGATGCTCAGCAGCTGTCGGTGAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATCAAAACCACCACCAATTGGA
GGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTT
ATGCGTGTTGCTCGTGTTCGAAGCCAAGAAATTGTCGAACGCCTTGCTCGTTGTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGA
GAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTCCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAG
AGTGTGATGGAGTTGGAGGCTTTGTTGGTGCCAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAG
GCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAATACTAGCGCACTCAAAACTGACTTAGATACAAATGGTTCTACTGC
TACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGC
TGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGTGGGCTTCTGGTTTGGAGCTCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCCGTCTCCGC
CTCCATCGAAACCCCCGCCGCCGCCGCTGACGATGCTCAGCAGCTGTCGGTGAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATCAAAACCACCACCAATTGGA
GGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTT
ATGCGTGTTGCTCGTGTTCGAAGCCAAGAAATTGTCGAACGCCTTGCTCGTTGTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGA
GAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTCCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAG
AGTGTGATGGAGTTGGAGGCTTTGTTGGTGCCAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATCTTCAAAGAG
GCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAATACTAGCGCACTCAAAACTGACTTAGATACAAATGGTTCTACTGC
TACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGC
TGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGA
Protein sequenceShow/hide protein sequence
MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASIETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWV
MRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKE
AKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK