; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G13970 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G13970
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionHNH domain-containing protein
Genome locationctg1869:667291..670311
RNA-Seq ExpressionCucsat.G13970
SyntenyCucsat.G13970
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002711 - HNH endonuclease
IPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138170.1 uncharacterized protein LOC101222461 [Cucumis sativus]6.67e-143100Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_008453210.1 PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo]6.15e-13997.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGDLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_022972967.1 uncharacterized protein LOC111471489 [Cucurbita maxima]3.38e-12790.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ESR +GS+ S LSPS SLLDRDLVT E++LLGDLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_023529236.1 uncharacterized protein LOC111792136 [Cucurbita pepo subsp. pepo]3.38e-12790.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ESR +GSH S LSPS SLLDRDLVT E++LLGDLK SPD SVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

XP_038880609.1 uncharacterized protein LOC120072255 [Benincasa hispida]3.83e-13394Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRR+KESKKKTR SSPLRDRTG PTSLESR YGS+PSSLSPSASLLDRDL+TGE+SLLGDLK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LUI5 HNH domain-containing protein3.23e-143100Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A1S3BWU4 uncharacterized protein LOC1034939972.98e-13997.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGDLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A5A7US43 HNH endonuclease2.98e-13997.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+PTSLES  YGSHPSSLSPSASLLDRDLVTGES+LLGDLKFSP+DSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1EZE0 uncharacterized protein LOC1114409506.66e-12790Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT      ESR +GSH S LSPS SLLDRDLVT E++LLGDLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD GGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

A0A6J1I688 uncharacterized protein LOC1114714891.64e-12790.5Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT   T  ESR +GS+ S LSPS SLLDRDLVT E++LLGDLK SPDDSVS+YNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
        RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
Subjt:  RRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein1.9e-2739.86Show/hide
Query:  SPDDSVSNYN--------PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNR
        SP  S S  N        PR F    K +CW  A+ + GR P+RWR+D  GN V ++   C GCLC +YDHI+PYSKGG+S  ENCQ+LQ  VNR K  +
Subjt:  SPDDSVSNYN--------PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNR

Query:  TEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCR
          +    L   S   + + +++D++E++ YG+V R      C+
Subjt:  TEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCR

AT3G47490.1 HNH endonuclease2.9e-6364.47Show/hide
Query:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S  S  KTRP       +GSP        G     +  SA+LLDR+    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ
         LGN VFRKLVGCPGCLCHDYDHI+PYSKGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R   S GCRIQ
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ

AT3G47490.2 HNH endonuclease1.2e-2955.81Show/hide
Query:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S  S  KTRP       +GSP        G     +  SA+LLDR+    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYSK
         LGN VFRKLVGCPGCLCHDYDHI+PYSK
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYSK

AT3G47490.3 HNH endonuclease1.1e-5958.53Show/hide
Query:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD
        S  S  KTRP       +GSP        G     +  SA+LLDR+    E  L     +       N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD
Subjt:  SKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRD

Query:  ALGNTVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELS
         LGN VFRKLVGCPGCLCHDYDHI+PYS                    KGGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+
Subjt:  ALGNTVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELS

Query:  AYGNVHRGQDSGGCRIQ
        AYGNV R   S GCRIQ
Subjt:  AYGNVHRGQDSGGCRIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGAAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCCTCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCCTTATGGCTCTCACCCATC
AAGCCTCAGCCCCTCTGCATCCCTTCTCGACCGGGACCTCGTCACCGGCGAATCCAGTCTCCTTGGAGACCTAAAATTCTCTCCAGATGACTCAGTTTCCAACTACAATC
CCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTT
CGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTCTTGCAGGCAAC
TGTGAATCGATCGAAGGGAAATCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTG
CCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCGAAGCAAAGAATCGAAGAAGAAAACTCGCCCCTCCTCACCGCTCAGGGACCGAACTGGTTCTCCAACAAGTCTCGAATCGAGGCCTTATGGCTCTCACCCATC
AAGCCTCAGCCCCTCTGCATCCCTTCTCGACCGGGACCTCGTCACCGGCGAATCCAGTCTCCTTGGAGACCTAAAATTCTCTCCAGATGACTCAGTTTCCAACTACAATC
CCCGGAGCTTTCCTCATAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACACTGTTTTT
CGAAAGCTTGTTGGCTGCCCCGGTTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGGAGGAAAAAGCACACTGGAAAATTGTCAGGTCTTGCAGGCAAC
TGTGAATCGATCGAAGGGAAATCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAACTATCTG
CCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGCTGTAGAATTCAATGA
Protein sequenceShow/hide protein sequence
MRRSKESKKKTRPSSPLRDRTGSPTSLESRPYGSHPSSLSPSASLLDRDLVTGESSLLGDLKFSPDDSVSNYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNTVF
RKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCRIQ