; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G140 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G140
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationctg1:2732949..2735137
RNA-Seq ExpressionCucsat.G140
SyntenyCucsat.G140
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596815.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia]7.20e-10291.62Show/hide
Query:  RNQKLSNTATMDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKD
        +NQKLSNT TMDKRSRDEK SGAATAP QGRPS RPLPPPSQ KAPPP PR RFEPVDREKTCPLLLRVFTKVG HHTDEDFA+RGKEPKDEVQIYTWKD
Subjt:  RNQKLSNTATMDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKD

Query:  ATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        ATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQ+
Subjt:  ATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

XP_004147963.1 histone deacetylase complex subunit SAP18 [Cucumis sativus]7.57e-10799.36Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

XP_008448944.1 PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo]6.21e-10698.09Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA APTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

XP_022152730.1 histone deacetylase complex subunit SAP18-like [Momordica charantia]3.28e-10194.9Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPS RPLPPPSQ KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

XP_038905116.1 histone deacetylase complex subunit SAP18-like [Benincasa hispida]3.62e-10192.64Show/hide
Query:  LSNTATMDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLR
        + NT TMDKRSRDEK SGAATAP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTD+DFA+RGKEPKDEVQIYTWKDATLR
Subjt:  LSNTATMDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLR

Query:  ELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        ELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  ELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

TrEMBL top hitse value%identityAlignment
A0A0A0L751 Uncharacterized protein3.67e-10799.36Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

A0A1S3BLT9 histone deacetylase complex subunit SAP18-like3.01e-10698.09Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA APTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

A0A5D3D7E1 Histone deacetylase complex subunit SAP18-like3.01e-10698.09Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA APTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

A0A6J1DES5 histone deacetylase complex subunit SAP18-like1.59e-10194.9Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPS RPLPPPSQ KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

A0A6J1KTJ0 histone deacetylase complex subunit SAP18-like2.92e-9792.36Show/hide
Query:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAATAP QGRPS RPLPPPSQ KAPPP PR RFEPVDREKTCPLLLRVFTKVG HHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQ+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP186.2e-2452.63Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQV
         DDS  L    FQ+
Subjt:  LDDSKALGELDFQV

O55128 Histone deacetylase complex subunit SAP188.1e-2452.63Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQV
         DDS  L    FQ+
Subjt:  LDDSKALGELDFQV

O64644 Histone deacetylase complex subunit SAP182.0e-4667.59Show/hide
Query:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F++
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

Q3T022 Histone deacetylase complex subunit SAP186.2e-2452.63Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQV
         DDS  L    FQ+
Subjt:  LDDSKALGELDFQV

Q5RDT5 Histone deacetylase complex subunit SAP186.2e-2452.63Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQV
         DDS  L    FQ+
Subjt:  LDDSKALGELDFQV

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P181.4e-4767.59Show/hide
Query:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F++
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV

AT2G45640.2 SIN3 associated polypeptide P181.3e-4567.59Show/hide
Query:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A  A  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV
        +LSFAFVYP+ +G +    VG T +Y N ++ DDSK L EL F++
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCCAACCCATTCCAAAAGCCCAAAACGAGACGAAGAAATGGCTAAACCAAACATGGAGGAATCAGAAGCTTAGTAACACTGCGACCATGGACAAGAGAAGCAGAGATGA
GAAGACGAGCGGAGCTGCAACTGCTCCGACGCAAGGGAGACCGTCGGGGCGGCCACTCCCTCCACCGTCTCAGACCAAAGCTCCGCCACCCAATCCTCGTCCTCGTTTCG
AACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTCCGCGTTTTTACTAAGGTTGGAGGTCATCATACTGATGAGGATTTTGCAGTTAGAGGTAAGGAACCCAAAGAT
GAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCTAGAAGAAGAAATGCCAAGCTTTCTTTTGCTTT
TGTTTATCCCGACAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGACGACAGCAAGGCATTGGGTGAATTGGACT
TCCAGGTATCGTTTATACATGATGAGTATTCACAAATTTGTACATCAAGATACAATGTTGTACAACAGCTGGAAAAATCCTCTCTCTACAAGGCAGGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
GTCCAACCCATTCCAAAAGCCCAAAACGAGACGAAGAAATGGCTAAACCAAACATGGAGGAATCAGAAGCTTAGTAACACTGCGACCATGGACAAGAGAAGCAGAGATGA
GAAGACGAGCGGAGCTGCAACTGCTCCGACGCAAGGGAGACCGTCGGGGCGGCCACTCCCTCCACCGTCTCAGACCAAAGCTCCGCCACCCAATCCTCGTCCTCGTTTCG
AACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTCCGCGTTTTTACTAAGGTTGGAGGTCATCATACTGATGAGGATTTTGCAGTTAGAGGTAAGGAACCCAAAGAT
GAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCTAGAAGAAGAAATGCCAAGCTTTCTTTTGCTTT
TGTTTATCCCGACAAGCGTGGTCGATTTGTTTTGAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGACGACAGCAAGGCATTGGGTGAATTGGACT
TCCAGGTATCGTTTATACATGATGAGTATTCACAAATTTGTACATCAAGATACAATGTTGTACAACAGCTGGAAAAATCCTCTCTCTACAAGGCAGGGCTTTAA
Protein sequenceShow/hide protein sequence
VQPIPKAQNETKKWLNQTWRNQKLSNTATMDKRSRDEKTSGAATAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRGKEPKD
EVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQVSFIHDEYSQICTSRYNVVQQLEKSSLYKAGL