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Cucsat.G14084 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14084
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMediator of RNA polymerase II transcription subunit 8 isoform X1
Genome locationctg1869:2456309..2457445
RNA-Seq ExpressionCucsat.G14084
SyntenyCucsat.G14084
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006464 - cellular protein modification process (biological process)
GO:0006796 - phosphate-containing compound metabolic process (biological process)
GO:0034645 - cellular macromolecule biosynthetic process (biological process)
GO:0034654 - nucleobase-containing compound biosynthetic process (biological process)
GO:0140513 - nuclear protein-containing complex (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]9.85e-2560.47Show/hide
Query:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNW
        FD SLS+SV++LL G  LP  PR+I   L KALL+E+W ERNQRIF DK R   EI ++   NAAAWCSL K F NYS Q +CLNW
Subjt:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNW

KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]9.70e-1848.04Show/hide
Query:  LTLLGV---FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS
        L+L GV   FDGS +S++ ++L G  L   PRLI  N+ KALL ++WFE NQRIF+ K     E  +  + NAA WC LNK F +YS Q L +NW  F+S
Subjt:  LTLLGV---FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS

Query:  QS
        Q+
Subjt:  QS

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]3.22e-2164.94Show/hide
Query:  RLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAA-AWCSLNKIFANYSTQVLCLNW
        +L EGPPLP KPRLI  NL KALL ELWFERNQ IF  K++  LEI  S + NA  AWCSLNK F +YS Q +CLNW
Subjt:  RLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAA-AWCSLNKIFANYSTQVLCLNW

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]1.93e-2760.87Show/hide
Query:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLSQ
        FD SLS+SV++LL G  LP  PR+I   L KALL+E+W ERNQRIF DK R   EI ++   NAAAWCSL K F NYS Q +CLNW VFL+Q
Subjt:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLSQ

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]5.85e-1442.39Show/hide
Query:  FDGSLSSSVVRLLEGPP-LPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS
        FD     +V +LL GPP L    R +  N++KALL ELWFERN R+F++K+R   E F S +  A+ WCSL   F ++S  ++  NW  F++
Subjt:  FDGSLSSSVVRLLEGPP-LPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS

TrEMBL top hitse value%identityAlignment
A0A5A7T2Y0 zf-RVT domain-containing protein4.77e-2560.47Show/hide
Query:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNW
        FD SLS+SV++LL G  LP  PR+I   L KALL+E+W ERNQRIF DK R   EI ++   NAAAWCSL K F NYS Q +CLNW
Subjt:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNW

A0A5A7V5N8 GPI-anchor transamidase isoform X14.70e-1848.04Show/hide
Query:  LTLLGV---FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS
        L+L GV   FDGS +S++ ++L G  L   PRLI  N+ KALL ++WFE NQRIF+ K     E  +  + NAA WC LNK F +YS Q L +NW  F+S
Subjt:  LTLLGV---FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS

Query:  QS
        Q+
Subjt:  QS

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X21.56e-2164.94Show/hide
Query:  RLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAA-AWCSLNKIFANYSTQVLCLNW
        +L EGPPLP KPRLI  NL KALL ELWFERNQ IF  K++  LEI  S + NA  AWCSLNK F +YS Q +CLNW
Subjt:  RLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAA-AWCSLNKIFANYSTQVLCLNW

A0A5D3DE60 zf-RVT domain-containing protein9.34e-2860.87Show/hide
Query:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLSQ
        FD SLS+SV++LL G  LP  PR+I   L KALL+E+W ERNQRIF DK R   EI ++   NAAAWCSL K F NYS Q +CLNW VFL+Q
Subjt:  FDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLSQ

A0A6J1DIE2 uncharacterized protein LOC1110207652.83e-1442.39Show/hide
Query:  FDGSLSSSVVRLLEGPP-LPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS
        FD     +V +LL GPP L    R +  N++KALL ELWFERN R+F++K+R   E F S +  A+ WCSL   F ++S  ++  NW  F++
Subjt:  FDGSLSSSVVRLLEGPP-LPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYSTQVLCLNWAVFLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGAGTCATTGCTTCATCTCTTCCTACTTTGCCCCTTTTCCTCTGTTTGTTGGAATAGTTTCTTCTCCATCTTTGACATTGCTTGGGGTATTCGATGGCTCCCT
CAGCTCCTCAGTGGTTAGGCTATTGGAGGGTCCACCTCTTCCTTATAAGCCTCGGCTGATTTTGTCAAATCTATTAAAAGCTCTTTTAGTTGAATTGTGGTTTGAACGTA
ATCAACGGATTTTTCAAGACAAGAAAAGATCAAGCCTAGAAATTTTCAATTCAGTGCAATGTAATGCAGCAGCTTGGTGCTCTCTAAACAAGATTTTTGCAAATTACTCC
ACACAAGTCCTTTGTCTCAATTGGGCAGTTTTTCTATCTCAGTCAGTTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGAGTCATTGCTTCATCTCTTCCTACTTTGCCCCTTTTCCTCTGTTTGTTGGAATAGTTTCTTCTCCATCTTTGACATTGCTTGGGGTATTCGATGGCTCCCT
CAGCTCCTCAGTGGTTAGGCTATTGGAGGGTCCACCTCTTCCTTATAAGCCTCGGCTGATTTTGTCAAATCTATTAAAAGCTCTTTTAGTTGAATTGTGGTTTGAACGTA
ATCAACGGATTTTTCAAGACAAGAAAAGATCAAGCCTAGAAATTTTCAATTCAGTGCAATGTAATGCAGCAGCTTGGTGCTCTCTAAACAAGATTTTTGCAAATTACTCC
ACACAAGTCCTTTGTCTCAATTGGGCAGTTTTTCTATCTCAGTCAGTTTCCTAG
Protein sequenceShow/hide protein sequence
MLMSHCFISSYFAPFPLFVGIVSSPSLTLLGVFDGSLSSSVVRLLEGPPLPYKPRLILSNLLKALLVELWFERNQRIFQDKKRSSLEIFNSVQCNAAAWCSLNKIFANYS
TQVLCLNWAVFLSQSVS