; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G14251 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14251
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationctg1869:4918010..4920907
RNA-Seq ExpressionCucsat.G14251
SyntenyCucsat.G14251
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652616.1 hypothetical protein Csa_013594 [Cucumis sativus]2.23e-4597.26Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        +DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPK RWFCCG
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_004152507.2 protein NOI4 [Cucumis sativus]7.65e-92100Show/hide
Query:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
        MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
Subjt:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG

Query:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]1.62e-4793.42Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_008439265.1 PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]6.10e-4592.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MAS D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

XP_038894676.1 protein NOI4 isoform X1 [Benincasa hispida]5.39e-4692.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQDKGR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTGTAAN VPQ+ +EPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein3.70e-92100Show/hide
Query:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
        MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG
Subjt:  MSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTG

Query:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  TAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AYE6 RPM1-interacting protein 4 isoform X22.95e-4592.11Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MAS D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A1S3AZ04 RPM1-interacting protein 4 isoform X17.83e-4893.42Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MASQD+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKKTTG AANMVP+ERNEPVFNNESYPQYPPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1GRZ4 RPM1-interacting protein 4-like1.59e-4081.58Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

A0A6J1K4F5 RPM1-interacting protein 4-like2.63e-3980.26Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG
        MA QDKG  LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPKKRWFCCG
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCCG

SwissProt top hitse value%identityAlignment
O22633 Protein NOI41.3e-1461.11Show/hide
Query:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC
        DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PKK W CC
Subjt:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC

Q8GYN5 RPM1-interacting protein 42.7e-0741.33Show/hide
Query:  SDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQERNEPVFNNES
        S P+P       S +K   +PKFGDWD NNP+SA+G+T IFNK R E+ +    +G++     Q    P  NN S
Subjt:  SDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT----TGTAANMVPQERNEPVFNNES

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein3.2e-1657.75Show/hide
Query:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCC
        DKGR LPKFG+WDVN+P+SAEGFTVIFNKARNEKK  G + +     ++EP +N         P K+WFCC
Subjt:  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPKKRWFCC

AT3G48450.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-1447.13Show/hide
Query:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTA-----ANMVPQERNEPVFNNES--------YPQYPPPKKRWFC
        MA+ ++ R LPKFG+WD  NP SAEGFTVIFNKAR++KKT  TA     + + P    EP  NN +        + Q P  KK+W C
Subjt:  MASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTA-----ANMVPQERNEPVFNNES--------YPQYPPPKKRWFC

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein3.3e-1357.97Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKR
        +DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P P K+
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKR

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein7.1e-1660.27Show/hide
Query:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC
        +DKGR LPKFG+WDVN+PASAEGFTVIFNKAR+EKKT G   +  P + +E  V +    P  P PKK W CC
Subjt:  QDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNE-PVFNNESYPQYPPPKKRWFCC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein9.3e-1653.25Show/hide
Query:  SQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQERNEPVFNNESYPQYPPPKKRWFC
        +++KG+ LPKFG+WDVNNPASAEGFTVIF+KA +EKKT   +G   N +  PQ       NN    Q P  K +WFC
Subjt:  SQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKT---TGTAANMV--PQERNEPVFNNESYPQYPPPKKRWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTATATGGAGGGTTCATAGAGATAATGAGCGACGTGCAACCGTCGTTAACAATCTCAACTGTCGCTCTCGTAACAAACTATTGTGTGTTACTGTTGACAAATTTGTC
CTTTTCCATCCTGTATTGCTCGCACTCTCTTTTTTCCCTTTCCGTTTTTGGTCTTCTCCTCTCCGATCCACGGCCCTTTCGTCCTGCAATCATGGCATCGCAGGACAAGG
GTCGTGCATTGCCAAAGTTCGGTGATTGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGACCACTGGAACT
GCTGCCAATATGGTTCCTCAAGAAAGAAATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCACCCAAGAAGAGGTGGTTTTGCTGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
TATTTATATGGAGGGTTCATAGAGATAATGAGCGACGTGCAACCGTCGTTAACAATCTCAACTGTCGCTCTCGTAACAAACTATTGTGTGTTACTGTTGACAAATTTGTC
CTTTTCCATCCTGTATTGCTCGCACTCTCTTTTTTCCCTTTCCGTTTTTGGTCTTCTCCTCTCCGATCCACGGCCCTTTCGTCCTGCAATCATGGCATCGCAGGACAAGG
GTCGTGCATTGCCAAAGTTCGGTGATTGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGACCACTGGAACT
GCTGCCAATATGGTTCCTCAAGAAAGAAATGAACCTGTCTTCAACAATGAGAGTTACCCTCAGTATCCTCCACCCAAGAAGAGGTGGTTTTGCTGTGGTTGA
Protein sequenceShow/hide protein sequence
YLYGGFIEIMSDVQPSLTISTVALVTNYCVLLLTNLSFSILYCSHSLFSLSVFGLLLSDPRPFRPAIMASQDKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGT
AANMVPQERNEPVFNNESYPQYPPPKKRWFCCG