; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G14332 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14332
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionnuclear transport factor 2
Genome locationctg1869:6016894..6018380
RNA-Seq ExpressionCucsat.G14332
SyntenyCucsat.G14332
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
InterPro domainsIPR002075 - Nuclear transport factor 2
IPR018222 - Nuclear transport factor 2, eukaryote
IPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056878.1 nuclear transport factor 2 [Cucumis melo var. makuwa]3.73e-6192.16Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ

Query:  MF
        ++
Subjt:  MF

XP_004153658.1 nuclear transport factor 2B [Cucumis sativus]1.67e-67100Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

XP_008441397.1 PREDICTED: nuclear transport factor 2 [Cucumis melo]5.33e-6294.12Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ

Query:  MF
        MF
Subjt:  MF

XP_023001318.1 nuclear transport factor 2B [Cucurbita maxima]1.22e-6089.32Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGVHDISS+LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

XP_038895004.1 nuclear transport factor 2B [Benincasa hispida]2.02e-5991.26Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEE DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGV DISSKLQQLPFER RH+VSTIDTQPSSV GS LIFVSGS+E+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

TrEMBL top hitse value%identityAlignment
A0A0A0LUU9 NTF2 domain-containing protein8.08e-68100Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

A0A1S3B3B7 nuclear transport factor 22.58e-6294.12Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ

Query:  MF
        MF
Subjt:  MF

A0A5D3BKX8 Nuclear transport factor 21.80e-6192.16Show/hide
Query:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ
        EE+GDIIGKAFVEHYY LFDNERASLSSLYQPDSMLTFEGQQILGV+DIS+KLQQLPFERCRHVVSTIDTQPSSV GSILIFVSGSIEIPEEEHPLR+SQ
Subjt:  EEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQ

Query:  MF
        ++
Subjt:  MF

A0A6J1F427 nuclear transport factor 2B3.98e-5987.38Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGV DISS+LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+P+EEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

A0A6J1KQ62 nuclear transport factor 2B5.89e-6189.32Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS
        MEEE DI+GKAFVEHYYQLFDNER SLS+LYQPDSMLTFEGQQILGVHDISS+LQQLPFERCRHVVST+DTQPS+V GSILIFVSGS+E+PEEEH LRFS
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFS

Query:  QMF
        QMF
Subjt:  QMF

SwissProt top hitse value%identityAlignment
Q8NJ52 Nuclear transport factor 21.5e-2047.92Show/hide
Query:  IGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        I + F E YY+ FD +RA L+ LY+ +SMLTFE    LG  +I  KLQ+LPF+R  H V+T+D QPS+  G IL+ VSG++ + EE  P+ ++Q F
Subjt:  IGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

Q96VN3 Nuclear transport factor 22.0e-2048.96Show/hide
Query:  IGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        I + FV  YYQ FD  RA L+ LY+  SMLTFE   I GV  I  KL  LPF++ +H VST+D QPS  HG IL+ V+G++ + EE++P+ ++Q F
Subjt:  IGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

Q9C7F5 Nuclear transport factor 2B6.4e-2756.12Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I +KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMF
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

Q9FZK4 Nuclear transport factor 2A5.4e-2655.1Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        D + KAFVEHYY  FD  R  L SLYQ  SMLTFEGQ+I G  +I +KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L+FSQMF
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

Q9XJ54 Nuclear transport factor 29.8e-2857Show/hide
Query:  EGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        + D + KAFVEHYY+ FD  R +L SLYQ  SMLTFEGQQ LG   I+ KL  LPF +C H ++T+D QPS   G +L+FVSGS+    +EHPL+FSQMF
Subjt:  EGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

Arabidopsis top hitse value%identityAlignment
AT1G11570.1 NTF2-like4.0e-3261.32Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEIPEEEHPL
        +EEE   +  AFV HYY LFDN+R+SLSSLY P S+LTFEGQ I GV +IS+KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+HPL
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEIPEEEHPL

Query:  RFSQMF
        RFSQ++
Subjt:  RFSQMF

AT1G11570.2 NTF2-like3.0e-3262.26Show/hide
Query:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEIPEEEHPL
        +EEE   +  AFV HYY LFDN+R+SLSSLY P S+LTFEGQ I GV +IS+KL+QLPF++C H++ST+D+QPSS+    G IL+FVSGSI++  E+HPL
Subjt:  MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVH---GSILIFVSGSIEIPEEEHPL

Query:  RFSQMF
        RFSQ F
Subjt:  RFSQMF

AT1G27310.1 nuclear transport factor 2A3.8e-2755.1Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        D + KAFVEHYY  FD  R  L SLYQ  SMLTFEGQ+I G  +I +KL  LPF++C+H ++T+D QPS   G +L+FVSG++++  E+H L+FSQMF
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

AT1G27970.1 nuclear transport factor 2B4.5e-2856.12Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I +KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMF
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF

AT1G27970.2 nuclear transport factor 2B4.5e-2856.12Show/hide
Query:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF
        D + KAFVEHYY  FD  R  L+ LYQ  SMLTFEGQ+I GV  I +KL  LPF++C+H +ST+D QPS     +L+FVSG++++  EEH L+FSQMF
Subjt:  DIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAGGGTGATATAATTGGGAAAGCTTTTGTGGAACATTACTACCAATTGTTTGATAATGAAAGAGCTTCTCTTTCATCTCTGTATCAGCCTGACTCGATGCT
CACTTTTGAAGGGCAACAAATTTTAGGAGTTCATGATATCTCCTCAAAGCTTCAGCAATTGCCATTTGAACGTTGTCGACATGTGGTTAGCACTATAGACACGCAGCCCT
CCTCCGTCCACGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATACCTGAAGAAGAACACCCACTCAGATTCAGTCAGATGTTTCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAGGGTGATATAATTGGGAAAGCTTTTGTGGAACATTACTACCAATTGTTTGATAATGAAAGAGCTTCTCTTTCATCTCTGTATCAGCCTGACTCGATGCT
CACTTTTGAAGGGCAACAAATTTTAGGAGTTCATGATATCTCCTCAAAGCTTCAGCAATTGCCATTTGAACGTTGTCGACATGTGGTTAGCACTATAGACACGCAGCCCT
CCTCCGTCCACGGCTCCATCCTCATCTTCGTCAGCGGTAGCATTGAGATACCTGAAGAAGAACACCCACTCAGATTCAGTCAGATGTTTCCTTAG
Protein sequenceShow/hide protein sequence
MEEEGDIIGKAFVEHYYQLFDNERASLSSLYQPDSMLTFEGQQILGVHDISSKLQQLPFERCRHVVSTIDTQPSSVHGSILIFVSGSIEIPEEEHPLRFSQMFP