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Cucsat.G14381 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14381
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein LOL2
Genome locationctg1869:6795199..6798546
RNA-Seq ExpressionCucsat.G14381
SyntenyCucsat.G14381
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146601.1 protein LOL2 isoform X2 [Cucumis sativus]1.28e-9094.89Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS      +DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_008442535.1 PREDICTED: protein LOL2 isoform X3 [Cucumis melo]6.04e-8793.43Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS      ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_008442544.1 PREDICTED: protein LOL2 isoform X4 [Cucumis melo]3.38e-8692.7Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS       DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_011653178.1 protein LOL2 isoform X1 [Cucumis sativus]2.28e-9195.62Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS     +ADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

XP_022927005.1 protein LOL2 [Cucurbita moschata]2.20e-8287.59Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        M++HEIEKDEDDGPPPGWEPITP LP PPP  LS      +DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVN+VLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCT VTEIGVHNRRPPWSV QGQAAPPTN VQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXE3 Uncharacterized protein6.18e-9194.89Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLS      +DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A1S3B6K2 protein LOL2 isoform X32.92e-8793.43Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS      ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A1S3B6Q2 protein LOL2 isoform X41.64e-8692.7Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS       DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A5A7UQS3 Protein LOL2 isoform X41.64e-8692.7Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS       DMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

A0A5D3DST5 Protein LOL2 isoform X32.92e-8793.43Show/hide
Query:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
        MDVHEIEKDEDDGPPPGWEPITPSLPLPP PQLS      ADMAQMVCGTCRRLLKYLKGARYVQCS CSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS
Subjt:  MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGAS

Query:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ
        SVRCSSCTSVTEIGVHNRRPPWSV QGQAAPPTNFVQ
Subjt:  SVRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ

SwissProt top hitse value%identityAlignment
O65426 Protein LOL22.4e-3456.06Show/hide
Query:  EIEKDEDDGPPPGWEPITPSLPLPPP---------PQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMY
        E E++E++GPPPGWE    S  LPPP         P  +    P  + AQMVCG+CRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMY
Subjt:  EIEKDEDDGPPPGWEPITPSLPLPPP---------PQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMY

Query:  PYGASSVRCSSCTSVTEIGVHNRRPPWSVHQG
        PYGA +VRCSSC SVT+I  +N+RPPWS  QG
Subjt:  PYGASSVRCSSCTSVTEIGVHNRRPPWSVHQG

P94077 Protein LSD12.9e-1942.37Show/hide
Query:  LPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHN
        +PPPP       P  DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N
Subjt:  LPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHN

Query:  RRPPWSVHQ--GQAAPPT
         R P   ++  G A PP+
Subjt:  RRPPWSVHQ--GQAAPPT

Q0J7V9 Protein LSD11.2e-2056.58Show/hide
Query:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        P  +MAQ+VCG C  LL Y++GA  VQCSCC TVN  +EA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Q704V3 Protein LOL54.2e-2654.05Show/hide
Query:  PGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV
        P  +   P +P PP P L+ E      + QMVCG+CR LL Y +GA YV C+CC T+N+VLEAHEVG+V CG CA LLMYP+GA +V+CS C  VTEIG 
Subjt:  PGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGV

Query:  HNRRPPWSVHQ
         N R   S+ Q
Subjt:  HNRRPPWSVHQ

Q93ZB1 Protein LOL16.9e-2157.89Show/hide
Query:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        P  +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Arabidopsis top hitse value%identityAlignment
AT1G32540.1 lsd one like 14.9e-2257.89Show/hide
Query:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        P  +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.2 lsd one like 14.9e-2257.89Show/hide
Query:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        P  +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.3 lsd one like 14.9e-2257.89Show/hide
Query:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        P  +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT4G20380.2 LSD1 zinc finger family protein2.1e-2042.37Show/hide
Query:  LPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHN
        +PPPP       P  DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N
Subjt:  LPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHN

Query:  RRPPWSVHQ--GQAAPPT
         R P   ++  G A PP+
Subjt:  RRPPWSVHQ--GQAAPPT

AT4G21610.1 lsd one like 21.7e-3556.06Show/hide
Query:  EIEKDEDDGPPPGWEPITPSLPLPPP---------PQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMY
        E E++E++GPPPGWE    S  LPPP         P  +    P  + AQMVCG+CRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMY
Subjt:  EIEKDEDDGPPPGWEPITPSLPLPPP---------PQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMY

Query:  PYGASSVRCSSCTSVTEIGVHNRRPPWSVHQG
        PYGA +VRCSSC SVT+I  +N+RPPWS  QG
Subjt:  PYGASSVRCSSCTSVTEIGVHNRRPPWSVHQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTCATGAAATCGAGAAAGACGAAGATGACGGCCCTCCTCCTGGATGGGAACCCATCACTCCCTCGCTGCCTCTACCACCGCCACCGCAACTTTCTTGTGAGTG
CTTCCCAGCAGCTGACATGGCACAAATGGTCTGTGGTACATGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAATGCTCTTGCTGTTCAACAGTTAACT
TTGTGTTAGAAGCTCACGAGGTTGGACAAGTTAAATGCGGTTCTTGTGCAGTGTTGCTTATGTACCCATATGGAGCATCATCAGTTAGGTGTTCCTCGTGTACCAGTGTG
ACAGAAATTGGGGTTCATAATAGACGGCCACCGTGGTCTGTTCACCAGGGACAAGCAGCCCCTCCTACCAACTTTGTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTCATGAAATCGAGAAAGACGAAGATGACGGCCCTCCTCCTGGATGGGAACCCATCACTCCCTCGCTGCCTCTACCACCGCCACCGCAACTTTCTTGTGAGTG
CTTCCCAGCAGCTGACATGGCACAAATGGTCTGTGGTACATGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAATGCTCTTGCTGTTCAACAGTTAACT
TTGTGTTAGAAGCTCACGAGGTTGGACAAGTTAAATGCGGTTCTTGTGCAGTGTTGCTTATGTACCCATATGGAGCATCATCAGTTAGGTGTTCCTCGTGTACCAGTGTG
ACAGAAATTGGGGTTCATAATAGACGGCCACCGTGGTCTGTTCACCAGGGACAAGCAGCCCCTCCTACCAACTTTGTCCAATAG
Protein sequenceShow/hide protein sequence
MDVHEIEKDEDDGPPPGWEPITPSLPLPPPPQLSCECFPAADMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSV
TEIGVHNRRPPWSVHQGQAAPPTNFVQ