; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G14647 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14647
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionF-box protein At3g07870-like
Genome locationctg1869:2867702..2869849
RNA-Seq ExpressionCucsat.G14647
SyntenyCucsat.G14647
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64030.1 hypothetical protein Csa_013491 [Cucumis sativus]3.69e-9399.28Show/hide
Query:  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE
        RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE
Subjt:  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE

Query:  LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHG
        LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRH 
Subjt:  LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHG

TYJ98917.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.57e-10478.54Show/hide
Query:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN
        +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN
Subjt:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN

Query:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR
         CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   +VQSQWR V S+STTYKM+R
Subjt:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR

Query:  HGTYF
        HGTYF
Subjt:  HGTYF

XP_004137594.1 F-box protein At5g65850 [Cucumis sativus]8.05e-155100Show/hide
Query:  MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWC
        MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWC
Subjt:  MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWC

Query:  SSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTT
        SSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTT
Subjt:  SSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTT

Query:  YKMYRHGTYFYNL
        YKMYRHGTYFYNL
Subjt:  YKMYRHGTYFYNL

XP_008447090.1 PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo]2.83e-10478.54Show/hide
Query:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN
        +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN
Subjt:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN

Query:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR
         CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   +VQSQWR V S+STTYKM+R
Subjt:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR

Query:  HGTYF
        HGTYF
Subjt:  HGTYF

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]3.95e-3844.16Show/hide
Query:  MGKKWNSK-SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFE-----SNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFK
        M KK  SK    +SELP DIL  I  KL PF NL TCRLVS  WN+ + S KF+     SNLF       R+R  +     CVDLDP+H +GM+ + SF 
Subjt:  MGKKWNSK-SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFE-----SNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFK

Query:  LHSSWCSSST--GIVNSCNGFLCILNTKR---------VAMLNPMTNEYMELPSSTQYELSV----YGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTS
         H +  S S    I+NSC+G + +L TKR         V +LNPMTNEY +LP+      SV    YGLG+SP+TK YK+ R  Y   E +VEI AFGTS
Subjt:  LHSSWCSSST--GIVNSCNGFLCILNTKR---------VAMLNPMTNEYMELPSSTQYELSV----YGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTS

Query:  LEDQDGKVQSQWRQVASMSTTYKMYRHGTYF
         E         W  V S+      Y HG YF
Subjt:  LEDQDGKVQSQWRQVASMSTTYKMYRHGTYF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ77 Uncharacterized protein1.79e-9399.28Show/hide
Query:  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE
        RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE
Subjt:  RNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGE

Query:  LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHG
        LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRH 
Subjt:  LLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHG

A0A1S3BGK6 F-box/LRR-repeat protein At2g43260-like1.37e-10478.54Show/hide
Query:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN
        +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN
Subjt:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN

Query:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR
         CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   +VQSQWR V S+STTYKM+R
Subjt:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR

Query:  HGTYF
        HGTYF
Subjt:  HGTYF

A0A1S3BQV8 putative F-box protein At3g211201.43e-3740.57Show/hide
Query:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCN
        ELP DIL QI  K+ PF NL TCRLVS+ WN+ ISS KF+ +  I  +  +R          CV+ DP+H +GM+++ SF  H  +CS+S+ I  +NSC+
Subjt:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCN

Query:  GFLCILNTKR---------VAMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMS
        G + +L TKR         V +LNP+TNEY + P+      +     YGLG+SPKT  YK+ R  + + E +V+I AFGTS E         W  + S+ 
Subjt:  GFLCILNTKR---------VAMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMS

Query:  TTYKMYRHGTYF
             Y HG YF
Subjt:  TTYKMYRHGTYF

A0A5D3BIH1 F-box/LRR-repeat protein1.25e-10478.54Show/hide
Query:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN
        +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN
Subjt:  SIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVN

Query:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR
         CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGLGYSPKTK YKV RHS+KN EL VEILAF TSL DQDG   +VQSQWR V S+STTYKM+R
Subjt:  SCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDG---KVQSQWRQVASMSTTYKMYR

Query:  HGTYF
        HGTYF
Subjt:  HGTYF

A0A5D3CIX9 Putative F-box protein1.43e-3740.57Show/hide
Query:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCN
        ELP DIL QI  K+ PF NL TCRLVS+ WN+ ISS KF+ +  I  +  +R          CV+ DP+H +GM+++ SF  H  +CS+S+ I  +NSC+
Subjt:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGI--VNSCN

Query:  GFLCILNTKR---------VAMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMS
        G + +L TKR         V +LNP+TNEY + P+      +     YGLG+SPKT  YK+ R  + + E +V+I AFGTS E         W  + S+ 
Subjt:  GFLCILNTKR---------VAMLNPMTNEYMELPS----STQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMS

Query:  TTYKMYRHGTYF
             Y HG YF
Subjt:  TTYKMYRHGTYF

SwissProt top hitse value%identityAlignment
Q9FT50 Putative F-box protein At3g523201.7e-0527.45Show/hide
Query:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPS-----RNRRRNRNRFDCV--DLDPKHFDGMNLIGSFKLHSSWCSSSTGI
        E+P ++L+ IL++L P  +L   + VSK+W   I+S ++ +N F    SPS        R N++++  +      +H      +     HS+       +
Subjt:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPS-----RNRRRNRNRFDCV--DLDPKHFDGMNLIGSFKLHSSWCSSSTGI

Query:  VNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKV
        VN+  G LC    +RV + NP T + +ELP            G+ P    YKV
Subjt:  VNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKV

Arabidopsis top hitse value%identityAlignment
AT3G10240.1 F-box and associated interaction domains-containing protein7.1e-0426.29Show/hide
Query:  SELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKH---FDGMN-------LIGSFKLHSSWCSS
        S +P D++ +ILL+L P  ++   R VSK W+  I++  +  NL  T+ SP        N    V   P+H   F+  N       LI  + +  S   +
Subjt:  SELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKH---FDGMN-------LIGSFKLHSSWCSS

Query:  STGIVNSCNGFLCILNTKRVAMLNPMTNEYMEL--PSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQV
              S NG +C   + R+ + NP T + + L  P+    +L+++ LGY P    +KV    +        +L  G++        Q  WR V
Subjt:  STGIVNSCNGFLCILNTKRVAMLNPMTNEYMEL--PSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQV

AT3G52320.1 F-box and associated interaction domains-containing protein1.2e-0627.45Show/hide
Query:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPS-----RNRRRNRNRFDCV--DLDPKHFDGMNLIGSFKLHSSWCSSSTGI
        E+P ++L+ IL++L P  +L   + VSK+W   I+S ++ +N F    SPS        R N++++  +      +H      +     HS+       +
Subjt:  ELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPS-----RNRRRNRNRFDCV--DLDPKHFDGMNLIGSFKLHSSWCSSSTGI

Query:  VNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKV
        VN+  G LC    +RV + NP T + +ELP            G+ P    YKV
Subjt:  VNSCNGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAGTGGAACAGCAAGAGCATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGAAGCTTCAACCATTTTCCAATTTATTCACTTGCAG
GCTAGTGAGTAAAGTTTGGAACGATTGCATTTCAAGTTTTAAGTTTGAGTCCAACCTTTTCATTACCCAAATTTCTCCTAGTCGTAATCGTAGACGTAATCGTAATCGCT
TTGACTGTGTGGACTTGGATCCTAAACATTTTGATGGGATGAATCTTATTGGGTCATTTAAGTTGCATTCTTCATGGTGCTCCTCCTCTACTGGAATTGTCAATAGTTGT
AATGGATTTCTTTGTATCTTGAATACCAAACGTGTTGCAATGTTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGTACTCAATATGAGTTGTCCGTTTATGG
ACTTGGTTATAGTCCCAAGACAAAGGGGTACAAAGTAGGAAGACATTCGTACAAAAATGGTGAGTTGTTAGTAGAGATTTTAGCATTTGGCACAAGTTTGGAGGATCAAG
ATGGGAAGGTTCAAAGTCAATGGAGACAGGTAGCTAGCATGAGTACAACCTATAAAATGTATCGCCATGGTACTTACTTTTACAACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAGTGGAACAGCAAGAGCATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGAAGCTTCAACCATTTTCCAATTTATTCACTTGCAG
GCTAGTGAGTAAAGTTTGGAACGATTGCATTTCAAGTTTTAAGTTTGAGTCCAACCTTTTCATTACCCAAATTTCTCCTAGTCGTAATCGTAGACGTAATCGTAATCGCT
TTGACTGTGTGGACTTGGATCCTAAACATTTTGATGGGATGAATCTTATTGGGTCATTTAAGTTGCATTCTTCATGGTGCTCCTCCTCTACTGGAATTGTCAATAGTTGT
AATGGATTTCTTTGTATCTTGAATACCAAACGTGTTGCAATGTTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGTACTCAATATGAGTTGTCCGTTTATGG
ACTTGGTTATAGTCCCAAGACAAAGGGGTACAAAGTAGGAAGACATTCGTACAAAAATGGTGAGTTGTTAGTAGAGATTTTAGCATTTGGCACAAGTTTGGAGGATCAAG
ATGGGAAGGTTCAAAGTCAATGGAGACAGGTAGCTAGCATGAGTACAACCTATAAAATGTATCGCCATGGTACTTACTTTTACAACCTATAA
Protein sequenceShow/hide protein sequence
MGKKWNSKSIIDSELPSDILLQILLKLQPFSNLFTCRLVSKVWNDCISSFKFESNLFITQISPSRNRRRNRNRFDCVDLDPKHFDGMNLIGSFKLHSSWCSSSTGIVNSC
NGFLCILNTKRVAMLNPMTNEYMELPSSTQYELSVYGLGYSPKTKGYKVGRHSYKNGELLVEILAFGTSLEDQDGKVQSQWRQVASMSTTYKMYRHGTYFYNL