; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G14679 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G14679
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like
Genome locationctg1869:3327881..3330782
RNA-Seq ExpressionCucsat.G14679
SyntenyCucsat.G14679
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:1903052 - positive regulation of proteolysis involved in cellular protein catabolic process (biological process)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0030674 - protein binding, bridging (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137466.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]4.45e-9399.26Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_008456997.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucumis melo]7.70e-94100Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022136971.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Momordica charantia]1.49e-9196.32Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_022994956.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]1.93e-8793.38Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS L M+SVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVLMKVIPGMT+DNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

XP_038894047.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Benincasa hispida]1.49e-9197.06Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRK RKTSPPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

TrEMBL top hitse value%identityAlignment
A0A0A0LSY6 ClpS domain-containing protein2.15e-9399.26Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKP IEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A1S3C561 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like3.73e-94100Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1C511 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X17.20e-9296.32Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS LMM+SVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKT+PPYRVLLHNDN+NKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GM+VVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1GS56 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic5.41e-8792.65Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS L M+SVAELGKGGGLLEKP  EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVLMKVIPGMT+DNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

A0A6J1K0P0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like9.37e-8893.38Show/hide
Query:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN
        GDKYYFHKQCRNRS L M+SVAELGKGGGLLEKPT EKTTPGRESEF+VRKSRK +PPYRVLLHNDN NKREYVVQVLMKVIPGMT+DNAVNIMQEAHYN
Subjt:  GDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYN

Query:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
        GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
Subjt:  GMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic4.6e-2252.29Show/hide
Query:  GGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS
        GG+++ PT   TT  ++    V +S+K  P Y+VLLHNDN+NKREYVV+VL+KV+  +T+D+AV  MQEAH  G+A+V+ C Q +AE +C  LR NGL S
Subjt:  GGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLS

Query:  SIEPASDGC
        +IEP   GC
Subjt:  SIEPASDGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS3.1e-1858.23Show/hide
Query:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP
        RK +P YRVLLHND+FN  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL SSIEP
Subjt:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS1.0e-1343.14Show/hide
Query:  EKPTIEKTTPGRESEFD--VRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSI
        E PT    +PG  +  D    + RK SP Y+VLLHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ +VI+C    AE +C  L+  GL SSI
Subjt:  EKPTIEKTTPGRESEFD--VRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSI

Query:  EP
        EP
Subjt:  EP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.4e-1556.16Show/hide
Query:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL
        RK +P YRVLLHND+FN  EYVV VLM+ +P +T   AV+IM EAH NG  +VI C    AE +C QL+ +GL
Subjt:  RKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.4e-5577.54Show/hide
Query:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
        GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQVLMKVIPGMT+DNAVNIMQEAH
Subjt:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH

Query:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
         NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.0e-5677.54Show/hide
Query:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
        GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQVLMKVIPGMT+DNAVNIMQEAH
Subjt:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH

Query:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
         NG+AVVI+CAQ DAE HCMQLRGNGLLSS+EP   GC
Subjt:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein5.8e-3658.7Show/hide
Query:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH
        GDK+   K  C NRS LM +S  A LGKGGG+L+KP IEKTTPGRESEFD+RKS+K +PPYRV+LHNDNFNKREYVVQVLMK                  
Subjt:  GDKYYFHK-QCRNRSALMMISV-AELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAH

Query:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC
                     DAE HCMQLRGNGLLSS+EP   GC
Subjt:  YNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTAGTTTTACCTGCAAAATTGTGAAGGCTGTTCATTTTATTATTCATTGGAACTTGCATGACATCTTCATACAATTTTACCCATTTATAATTGCTATTTGTGT
CATAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGTGCCTTAATGATGATATCAGTTGCTGAGCTTGGAAAAGGCGGGGGGTTGTTGGAAAAACCAACAA
TAGAGAAGACAACTCCGGGCCGTGAATCTGAGTTTGATGTTAGGAAATCAAGGAAAACTTCTCCACCTTATCGAGTGTTGCTACATAATGACAATTTCAACAAGCGGGAA
TACGTTGTTCAAGTTCTGATGAAGGTGATTCCTGGAATGACACTTGACAATGCAGTCAACATAATGCAGGAAGCGCATTACAATGGGATGGCAGTGGTAATTATCTGCGC
TCAAGTAGACGCAGAAGATCACTGCATGCAGCTTAGAGGCAATGGCCTTCTCAGTTCAATCGAGCCTGCAAGCGATGGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTAGTTTTACCTGCAAAATTGTGAAGGCTGTTCATTTTATTATTCATTGGAACTTGCATGACATCTTCATACAATTTTACCCATTTATAATTGCTATTTGTGT
CATAGGGGATAAATACTATTTTCATAAACAATGTAGAAACCGGAGTGCCTTAATGATGATATCAGTTGCTGAGCTTGGAAAAGGCGGGGGGTTGTTGGAAAAACCAACAA
TAGAGAAGACAACTCCGGGCCGTGAATCTGAGTTTGATGTTAGGAAATCAAGGAAAACTTCTCCACCTTATCGAGTGTTGCTACATAATGACAATTTCAACAAGCGGGAA
TACGTTGTTCAAGTTCTGATGAAGGTGATTCCTGGAATGACACTTGACAATGCAGTCAACATAATGCAGGAAGCGCATTACAATGGGATGGCAGTGGTAATTATCTGCGC
TCAAGTAGACGCAGAAGATCACTGCATGCAGCTTAGAGGCAATGGCCTTCTCAGTTCAATCGAGCCTGCAAGCGATGGTTGTTGA
Protein sequenceShow/hide protein sequence
MVRSFTCKIVKAVHFIIHWNLHDIFIQFYPFIIAICVIGDKYYFHKQCRNRSALMMISVAELGKGGGLLEKPTIEKTTPGRESEFDVRKSRKTSPPYRVLLHNDNFNKRE
YVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIICAQVDAEDHCMQLRGNGLLSSIEPASDGC