; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1472 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1472
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCiliary neurotrophic factor
Genome locationctg10:198598..200066
RNA-Seq ExpressionCucsat.G1472
SyntenyCucsat.G1472
Gene Ontology termsGO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025378.1 hypothetical protein SDJN02_11873 [Cucurbita argyrosperma subsp. argyrosperma]8.92e-7569.68Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR
        E+EQRLELI  AI RLL++NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGTESEEL SALD LK+K ++S  ++  DDE SRED+VKELKK+KR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        QN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP L+I +LP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

XP_004140639.1 uncharacterized protein LOC101222559 [Cucumis sativus]1.63e-12099.47Show/hide
Query:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL
        MEEEEQRLELISHAIRRLL DNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL
Subjt:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

XP_008459843.1 PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]4.44e-11192.02Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSRED+VKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI +LP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

XP_022155422.1 uncharacterized protein LOC111022569 [Momordica charantia]3.29e-7772.38Show/hide
Query:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECS-REDVVKELKKL
        EEEQRLELI+ AIRRL+ E+N NKKSSDRSSV D DE  + +LLR+LLSQIESLKE  ESEE+ SA+DT KTK ++S++EEIVDDECS RE++V+ELKK+
Subjt:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECS-REDVVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI
        KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ +RPKTIV++T+K SSKQDHDE ++LP +++
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI

XP_038874574.1 uncharacterized protein LOC120067172 [Benincasa hispida]3.95e-10185.42Show/hide
Query:  MEEEEQRLELISHAIRRLLED--NKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELK
        MEEEEQRLELIS AIRRLLE+  NKNKKSSDRSS+DDGDEN N +LLRDLLSQIESLKEGTESEE  S LDTLKTKVESS+KEEIVDDECSRED+VKELK
Subjt:  MEEEEQRLELISHAIRRLLED--NKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELK

Query:  KLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        KLKRQNLLTHCLLSVMI++TVVWQLSEVSIILNVKDKISHPF+SLGN ISG+ +RPKTIVDNT+K SSKQDHDE S+LPPLKI +LP V LQ
Subjt:  KLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K9P4 Uncharacterized protein7.88e-12199.47Show/hide
Query:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL
        MEEEEQRLELISHAIRRLL DNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL
Subjt:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

A0A1S3CAM6 uncharacterized protein LOC1034988432.15e-11192.02Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSRED+VKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI +LP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

A0A5A7T973 Uncharacterized protein2.15e-11192.02Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSRED+VKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI +LP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ

A0A6J1DPA5 uncharacterized protein LOC1110225691.59e-7772.38Show/hide
Query:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECS-REDVVKELKKL
        EEEQRLELI+ AIRRL+ E+N NKKSSDRSSV D DE  + +LLR+LLSQIESLKE  ESEE+ SA+DT KTK ++S++EEIVDDECS RE++V+ELKK+
Subjt:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECS-REDVVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI
        KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ +RPKTIV++T+K SSKQDHDE ++LP +++
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI

A0A6J1KTZ8 uncharacterized protein LOC1114976209.39e-7465.37Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT------------ESEELISALDTLKTKVESSIKEEIVDD----
        E+EQRLELI  AI RLL++NKNK+SSDRS + D DENG+ +LL DLLSQIESLKEGT            ESEEL SALD LK K ++S+KEEI DD    
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGT------------ESEELISALDTLKTKVESSIKEEIVDD----

Query:  -ECSREDVVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLP
         E S+ED+VKELKK+KRQN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTI++N    S KQ+HDE S+LPPL+I +LP
Subjt:  -ECSREDVVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLP

Query:  QVGLQ
         VGL+
Subjt:  QVGLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein2.4e-1934.87Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIES--------LKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVV
        E  + +E +S AI +LL + + +++S  + ++D D+      L  L+SQ+ES        +  G E E+   + D+  +K +S  + ++   E S E++ 
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIES--------LKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVV

Query:  KELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFR---RP-KTIVDNTDKISSKQDHDEVSLL-PPLKISDL
        K++KK+K+QN +TH LLS  I+LT+VWQLSE S+I  +KD+ISHP RS+G  ++GMF+   RP K  +  T   + + +H   S   P L++ +L
Subjt:  KELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFR---RP-KTIVDNTDKISSKQDHDEVSLL-PPLKISDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAGAGCAACGCCTAGAGTTGATTAGCCATGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAAATCCTCTGATCGGAGCTCCGTCGACGATGGCGA
TGAAAACGGAAACCCTTCTCTCCTCCGCGACTTGCTCTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCAGAAGAGTTAATTTCTGCATTAGATACTTTGAAAACAA
AAGTTGAAAGTTCTATTAAAGAGGAAATTGTTGATGATGAGTGCAGTAGAGAAGACGTTGTCAAAGAGTTGAAGAAGCTGAAGAGGCAAAACCTTTTAACTCATTGTCTT
CTCTCAGTGATGATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCCCTTTAGATCTTTGGGTAATTTTAT
CTCAGGAATGTTCAGACGCCCCAAAACCATTGTTGATAATACAGACAAGATTTCATCTAAACAAGACCATGATGAAGTTTCATTGCTTCCCCCTCTCAAAATTTCAGACC
TTCCTCAAGTGGGTTTGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAAGAGCAACGCCTAGAGTTGATTAGCCATGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAAATCCTCTGATCGGAGCTCCGTCGACGATGGCGA
TGAAAACGGAAACCCTTCTCTCCTCCGCGACTTGCTCTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCAGAAGAGTTAATTTCTGCATTAGATACTTTGAAAACAA
AAGTTGAAAGTTCTATTAAAGAGGAAATTGTTGATGATGAGTGCAGTAGAGAAGACGTTGTCAAAGAGTTGAAGAAGCTGAAGAGGCAAAACCTTTTAACTCATTGTCTT
CTCTCAGTGATGATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCCCTTTAGATCTTTGGGTAATTTTAT
CTCAGGAATGTTCAGACGCCCCAAAACCATTGTTGATAATACAGACAAGATTTCATCTAAACAAGACCATGATGAAGTTTCATTGCTTCCCCCTCTCAAAATTTCAGACC
TTCCTCAAGTGGGTTTGCAATAA
Protein sequenceShow/hide protein sequence
MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPSLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDVVKELKKLKRQNLLTHCL
LSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISDLPQVGLQ