; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G1502 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G1502
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionExopolygalacturonase-like
Genome locationctg1000:443652..444685
RNA-Seq ExpressionCucsat.G1502
SyntenyCucsat.G1502
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647377.1 hypothetical protein Csa_004085 [Cucumis sativus]6.75e-19399.63Show/hide
Query:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
        PAQPAG AGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
Subjt:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT

Query:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
        GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
Subjt:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC

Query:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
Subjt:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

XP_011657634.1 exopolygalacturonase [Cucumis sativus]1.93e-194100Show/hide
Query:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
        PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
Subjt:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT

Query:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
        GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
Subjt:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC

Query:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
Subjt:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

XP_031742831.1 exopolygalacturonase-like [Cucumis sativus]5.53e-19299.26Show/hide
Query:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
        PAQPAG AGGVFDITKYGAKPNADITAALTSAWK ACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
Subjt:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT

Query:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
        GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
Subjt:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC

Query:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
Subjt:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

XP_031742832.1 exopolygalacturonase-like [Cucumis sativus]1.93e-194100Show/hide
Query:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
        PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
Subjt:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT

Query:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
        GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
Subjt:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC

Query:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
Subjt:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

XP_031742970.1 exopolygalacturonase-like [Cucumis sativus]1.93e-194100Show/hide
Query:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
        PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT
Subjt:  PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGT

Query:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
        GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC
Subjt:  GVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC

Query:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
Subjt:  ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

TrEMBL top hitse value%identityAlignment
A0A5A7TR51 Exopolygalacturonase-like2.35e-17592.78Show/hide
Query:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK
        GGVFDITKYGAKPNAD+TAAL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL+LE  D LTVSGTGVLDGQGK
Subjt:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
        AGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDSKN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+NK
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        QV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFPA+DM
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

A0A5A7TRZ0 Exopolygalacturonase-like2.35e-17592.78Show/hide
Query:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK
        GGVFDITKYGAKPNAD+TAAL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL+LE  D LTVSGTGVLDGQGK
Subjt:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
        AGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDSKN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+NK
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        QV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFPA+DM
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

A0A5A7ULW5 Exopolygalacturonase-like8.56e-16487.07Show/hide
Query:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK
        G VFD+T +GAKP+ADIT AL SAWKE CAS TPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAP+ P+G+GLLILE  D LTVSG GVLDGQGK
Subjt:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
         GWEKNDCHLKK CTKLPMNLKLNFITNSIV  ITSLDSKN+HINLLGCKNLTFDHVTITAPG+SPNTDGIHVSSSE+INILNTNIATGDDCISVGD+NK
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        Q+ ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDS   FPA+DM
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

A0A5D3BWP4 Exopolygalacturonase-like1.83e-17291.63Show/hide
Query:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK
        G V DITK+GAKPNAD+TAAL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL+LE  D LTVSGTGVLDGQGK
Subjt:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
        AGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDSKN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+NK
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        QV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFPA+DM
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

A0A5D3DYI3 Exopolygalacturonase-like1.92e-17492.4Show/hide
Query:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK
        G VFDITKYGAKPNAD+TAAL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL+LE  D LTVSGTGVLDGQGK
Subjt:  GGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
        AGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDSKN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+NK
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        QV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFPA+DM
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)3.8e-7957.61Show/hide
Query:  DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKK
        D T ALT+AWKEACAS +PS +L+PKG++ +    L+GPCKS I LQ++GTL+APA P   +G G + L   DLLT+ G GV DGQGK+ W +NDCH   
Subjt:  DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKK

Query:  E-CTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGP
          C  L MNL+L  +TNSI+  +T+LDSKNFH+N++GCKNLTF+   I+A   S NTDGIH+  S+ +NI+NT I TGDDCIS+GD +K + I+++TCGP
Subjt:  E-CTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGP

Query:  GHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS
        GHGIS+GSLG+Y  E+ VVG+ VK C +TG+ NGVRIKTWP S
Subjt:  GHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS

Q05967 Polygalacturonase3.1e-8158.75Show/hide
Query:  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDG
        GVFDITKYGA  NADI+ AL +A+KEAC ST+PS ++IPKG++ ++Q  L+GPCKSP+ELQI+ TL+AP+ P     GE L +    D  T+SG G+LDG
Subjt:  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDG

Query:  QGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD
        Q  A WE   C   K+C KLP NL  N +TNS +  IT+LDSK+FH+N+  CKNLTF    ++AP NSPNTDGIHVS S  +NI ++N +TGDDCISVGD
Subjt:  QGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD

Query:  SNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS
          +Q+ I+ VTCGPGHGIS+GSLG    EK VVGV V+ C  T T NGVRIKTWP S
Subjt:  SNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS

Q39766 Polygalacturonase9.0e-7350.4Show/hide
Query:  ITKYGAKPN--ADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGK
        + K+GAK +   D++     AWKEACAS TPS V+IPKG+Y LS+ NL+GPCK+PIE+ ++GT+QAPA P   +    +   + +   + G G+ DGQG 
Subjt:  ITKYGAKPN--ADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGK

Query:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK
          +EKN C  ++  +KLP+N++ +F+TN+++  ITS DSK FHIN+  CKN+T + + I AP  SPNTDGIH+  SE +NI+ ++I TGDDCIS+GD  K
Subjt:  AGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNK

Query:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWP
         + I ++TCGPGHGISIGSLGK+  E+ V G+ +  C +T T+NG RIKTWP
Subjt:  QVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWP

Q40312 Polygalacturonase5.1e-8456.67Show/hide
Query:  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDG
        GV DI+K+G KPN+DI  ALTSAW EACASTT +K++IP G+Y L+   LKGPCK+PIELQ++GT+QAPA P      E        D LT+SG GV DG
Subjt:  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDG

Query:  QGKAGWEK----NDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCI
        QG   ++K    +    K   +K+ MN   NF+ NSIV G+TS DSKNFH+ + GCKN+TFD  TITAPG+SPNTDGIH+  S  + ILNTNI TGDDC+
Subjt:  QGKAGWEK----NDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCI

Query:  SVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        S+GD +KQ+ +  V CGPGHG+S+GSLGK+T E+ V G+TVK C LT T NGVRIKTWPD+      +D+
Subjt:  SVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

Q6H9K0 Exopolygalacturonase (Fragment)1.9e-7854.48Show/hide
Query:  AGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCK-SPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVL
        +G VF++  YGAK   DI+ A+  AWK ACAS  PS VLIPKG+Y + +  ++GPCK S I  QI+G ++APA P   + +G +     D LTVSGTG L
Subjt:  AGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCK-SPIELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVL

Query:  DGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISV
        DGQG+  W KN+C     C    MNL+ +F+ +++V  ITSL+SK FHIN+L C+++TF HVT+TAPG S NTDGIHV  S+ + I NT IATGDDCIS+
Subjt:  DGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISV

Query:  GDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        G  ++ V I+ V CGPGHGISIGSLG+Y  EKEV G+TVK C  +GT NGVR+KTWP+S     ATD+
Subjt:  GDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein7.8e-7248.28Show/hide
Query:  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP-EG-EGLLILENTDLLTVSGTGVLDGQGKAG
        ++   G+   +DIT AL  A+  AC S++PSKV+IPKG + L +  ++GPCK+PIE+ ++GT++A  +  +G E  ++  N D   ++G G  DG+G A 
Subjt:  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP-EG-EGLLILENTDLLTVSGTGVLDGQGKAG

Query:  WEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQV
        W  N+CH   EC KLP++++ +FI NS +  I+S+D+KNFHIN+LG KN+T +++ I AP +SPNTDGIH+  S+ + ILN+ I+TGDDCISVGD  K +
Subjt:  WEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQV

Query:  AISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
         +  VTCGPGHGIS+GSLG+Y  E++V G+ V  C L  T NG+RIKTWP +A +  A+D+
Subjt:  AISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

AT3G07830.1 Pectin lyase-like superfamily protein1.2e-6945.15Show/hide
Query:  GGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP--EGEGLLILENTDLLTVSGTGVL
        G +    ++ +  + P +DIT AL  A+  AC S TP KV+IPKG + L +  + GPCKSP+E+ + GT+ A  +     E  ++ +  D   ++G G  
Subjt:  GGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP--EGEGLLILENTDLLTVSGTGVL

Query:  DGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISV
        DG+G A W  N+CH   EC KLP++++ +F+TN+ +  I+S+D+KNFHIN++G KN+TFD+V I AP  SPNTDGIH+  S  ++I+N+ I+TGDDC+SV
Subjt:  DGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISV

Query:  GDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
        GD    + + +V CGPGHGIS+GSLG+Y  E++V G+ V  C L  T NG+RIKTWP +A +  A+++
Subjt:  GDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM

AT3G07840.1 Pectin lyase-like superfamily protein9.2e-7348.65Show/hide
Query:  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQA--PAHPEGEGLLILENTDLLTVSGTGVLDGQGKAG
        ++   G  P +DIT AL  A+  AC + T SKV+I KG + L +  + GPCK+P+E+ ++GTL+A   A    E  ++    +   ++G G+ DG+G A 
Subjt:  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQA--PAHPEGEGLLILENTDLLTVSGTGVLDGQGKAG

Query:  WEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQV
        W  N+CH   EC KLP++++ +F+ N+ +  I+S+D+KNFHIN+LG KN+TFD+V + AP  SPNTDGIH+  SE + ILN+ IATGDDCISVGD  K +
Subjt:  WEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQV

Query:  AISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPAT
         + +V CGPGHGIS+GSLG+Y  E++V G+TV  C L GT NG+RIKTWP +A A  A+
Subjt:  AISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPAT

AT3G07850.1 Pectin lyase-like superfamily protein7.8e-6445.59Show/hide
Query:  GGVFDITKYGAKPNA--DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGT-G
        G   D+   GAK ++  D +AA  +AWKEACA+   S + +PKG Y +     KGPCK P+ L++ G  +APA  +      G +  EN    T++G   
Subjt:  GGVFDITKYGAKPNA--DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGT-G

Query:  VLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCI
        + DGQG   W+ NDC    +C  LP+N++   +TNS +  ITS +SK FH+N+L CKN+T   + I AP  S NTDGIH+  S  +N++   I TGDDC+
Subjt:  VLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCI

Query:  SVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS
        S+GD  + + + +V CGPGHGISIGSLG+Y  E+ V GVTV+KC +  T NGVRIKTWP S
Subjt:  SVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDS

AT5G48140.1 Pectin lyase-like superfamily protein1.9e-7048.65Show/hide
Query:  ITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEG-EGLLILENTDLLTVSGTGVLDGQGKAGWE
        I    + P +DIT AL  A+ EAC   T S V+IPKG Y L +  + GPCK+PI + + GT++A  +  G E  +   N +   ++G GV DG+G A W 
Subjt:  ITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEG-EGLLILENTDLLTVSGTGVLDGQGKAGWE

Query:  KNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAI
         N+CH    C KLP++++ +F+T++ + GITSLD+K+FHIN++G KN+TF+ V I AP  SPNTDGIHV  S+ I I+N+ I+TGDDC+SVGD  K + +
Subjt:  KNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAI

Query:  SDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM
          VTCGPGHGISIGSLG+Y+ E+ V G+ +  C L  T NG+RIKTWP +A    A+D+
Subjt:  SDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGCTCAACCTGCAGGTGGTGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGCATTGACAAGTGCATGGAAGGAGGCATG
TGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGA
CATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGT
TGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAG
CAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTT
CAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGACTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGA
CATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATTAA
AACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATG
mRNA sequenceShow/hide mRNA sequence
CCAGCTCAACCTGCAGGTGGTGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGCATTGACAAGTGCATGGAAGGAGGCATG
TGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGA
CATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGT
TGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAG
CAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTT
CAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGACTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGA
CATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATTAA
AACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATG
Protein sequenceShow/hide protein sequence
PAQPAGGAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAG
WEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPG
HGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDM