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Cucsat.G15057 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G15057
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhomeobox-leucine zipper protein GLABRA 2-like
Genome locationctg1918:137657..139168
RNA-Seq ExpressionCucsat.G15057
SyntenyCucsat.G15057
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000047 - Helix-turn-helix motif
IPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site
IPR042160 - Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650727.1 hypothetical protein Csa_023399 [Cucumis sativus]8.92e-66100Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDDL
Subjt:  CPNCGTADATQDDL

XP_008447518.1 PREDICTED: homeobox-leucine zipper protein GLABRA 2-like isoform X1 [Cucumis melo]1.45e-6597.37Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDD+
Subjt:  CPNCGTADATQDDL

XP_016900387.1 PREDICTED: homeobox-leucine zipper protein GLABRA 2-like isoform X2 [Cucumis melo]5.46e-6797.37Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDD+
Subjt:  CPNCGTADATQDDL

XP_031737751.1 homeobox-leucine zipper protein GLABRA 2-like [Cucumis sativus]1.12e-65100Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDDL
Subjt:  CPNCGTADATQDDL

XP_038904725.1 homeobox-leucine zipper protein GLABRA 2-like [Benincasa hispida]1.93e-5892.79Show/hide
Query:  VDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGC
        VDHGC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKK+GC
Subjt:  VDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGC

Query:  PNCGTADATQD
         NCG +DA +D
Subjt:  PNCGTADATQD

TrEMBL top hitse value%identityAlignment
A0A097A1M3 Multicellular trichome development class IV homeodomain-leucine zipper transcription factor5.41e-66100Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDDL
Subjt:  CPNCGTADATQDDL

A0A0A0LBQ1 Uncharacterized protein1.85e-68100Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDDL
Subjt:  CPNCGTADATQDDL

A0A1S3BII5 homeobox-leucine zipper protein GLABRA 2-like isoform X17.02e-6697.37Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDD+
Subjt:  CPNCGTADATQDDL

A0A1S4DWM6 homeobox-leucine zipper protein GLABRA 2-like isoform X22.64e-6797.37Show/hide
Query:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
        LVDHGC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG
Subjt:  LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIG

Query:  CPNCGTADATQDDL
        CPNCGTADATQDD+
Subjt:  CPNCGTADATQDDL

A0A6J1G9F2 homeobox-leucine zipper protein GLABRA 2 isoform X11.14e-5791.82Show/hide
Query:  DHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCP
        D GC +KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE++KKK+GCP
Subjt:  DHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCP

Query:  NCGTADATQD
        NCGTA+A +D
Subjt:  NCGTADATQD

SwissProt top hitse value%identityAlignment
P46607 Homeobox-leucine zipper protein GLABRA 23.2e-4082.35Show/hide
Query:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN
        G   ++RKKYHRHTT+QIR MEALFKE+PHPDEKQRQQLSK+LGL+PRQVKFWFQNRRTQIKAIQERHEN+LLKAE+EKLREENKAMRE  SK    CPN
Subjt:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN

Query:  CG
        CG
Subjt:  CG

Q5JMF3 Homeobox-leucine zipper protein ROC97.4e-3773.08Show/hide
Query:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD
        +RRK YHRHT EQIR MEALFKESPHPDE+QRQQ+SK+LGLS RQVKFWFQNRRTQIKA+QERHEN+LLK+E+EKL++E++AMRE++KK   C NCG   
Subjt:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD

Query:  ATQD
         + D
Subjt:  ATQD

Q6EPF0 Homeobox-leucine zipper protein ROC51.8e-2764.29Show/hide
Query:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGT
        KR+K+YHRHT +QI+E+EALFKE PHPDEKQR +LS+RL L  RQVKFWFQNRRTQ+K   ERHEN LLK E +KLR EN  +RE  +  + C +CG+
Subjt:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGT

Q7Y0V9 Homeobox-leucine zipper protein ROC41.8e-3065.05Show/hide
Query:  DHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCP
        +HG   KR+K+YHRHT +QI+E+EA+FKE PHPDEKQR +LSKRLGL PRQVKFWFQNRRTQ+K   ERHEN+LLK E +KLR EN ++RE +   + C 
Subjt:  DHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCP

Query:  NCG
         CG
Subjt:  NCG

Q9FX31 Homeobox-leucine zipper protein HDG112.2e-2860.58Show/hide
Query:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD
        +++K+YHRHT +QI+ +E+ FKE PHPDEKQR QLS+ LGL+PRQ+KFWFQNRRTQ+KA  ER +N+ LKAE +K+R EN A+RE  K  I CPNCG   
Subjt:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD

Query:  ATQD
         ++D
Subjt:  ATQD

Arabidopsis top hitse value%identityAlignment
AT1G73360.1 homeodomain GLABROUS 111.5e-2960.58Show/hide
Query:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD
        +++K+YHRHT +QI+ +E+ FKE PHPDEKQR QLS+ LGL+PRQ+KFWFQNRRTQ+KA  ER +N+ LKAE +K+R EN A+RE  K  I CPNCG   
Subjt:  KRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTAD

Query:  ATQD
         ++D
Subjt:  ATQD

AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain2.3e-4182.35Show/hide
Query:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN
        G   ++RKKYHRHTT+QIR MEALFKE+PHPDEKQRQQLSK+LGL+PRQVKFWFQNRRTQIKAIQERHEN+LLKAE+EKLREENKAMRE  SK    CPN
Subjt:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN

Query:  CG
        CG
Subjt:  CG

AT1G79840.2 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain2.3e-4182.35Show/hide
Query:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN
        G   ++RKKYHRHTT+QIR MEALFKE+PHPDEKQRQQLSK+LGL+PRQVKFWFQNRRTQIKAIQERHEN+LLKAE+EKLREENKAMRE  SK    CPN
Subjt:  GCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE-ISKKKIGCPN

Query:  CG
        CG
Subjt:  CG

AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein5.0e-2864.58Show/hide
Query:  RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCG
        R+K+YHRHT +QI+E+E++FKE PHPDEKQR +LSKRL L  RQVKFWFQNRRTQ+K   ERHEN LL+ E +KLR EN ++RE  +  I C NCG
Subjt:  RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCG

AT4G00730.2 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein5.0e-2864.58Show/hide
Query:  RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCG
        R+K+YHRHT +QI+E+E++FKE PHPDEKQR +LSKRL L  RQVKFWFQNRRTQ+K   ERHEN LL+ E +KLR EN ++RE  +  I C NCG
Subjt:  RRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGTAGATCATGGGTGTCAGTTAAAGAGAAGGAAGAAATATCATCGCCATACCACCGAGCAGATCAGAGAAATGGAGGCGTTGTTTAAAGAGTCGCCACATCCAGATGA
GAAACAAAGGCAGCAACTCAGCAAGAGATTAGGACTTTCACCAAGGCAGGTCAAGTTTTGGTTTCAAAATCGTCGAACCCAAATCAAAGCTATTCAAGAGAGGCATGAAA
ACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTTCCAAGAAAAAAATTGGCTGTCCCAATTGTGGAACTGCCGACGCTACT
CAAGACGACCTC
mRNA sequenceShow/hide mRNA sequence
TTAGTAGATCATGGGTGTCAGTTAAAGAGAAGGAAGAAATATCATCGCCATACCACCGAGCAGATCAGAGAAATGGAGGCGTTGTTTAAAGAGTCGCCACATCCAGATGA
GAAACAAAGGCAGCAACTCAGCAAGAGATTAGGACTTTCACCAAGGCAGGTCAAGTTTTGGTTTCAAAATCGTCGAACCCAAATCAAAGCTATTCAAGAGAGGCATGAAA
ACACATTGTTAAAAGCTGAAATGGAGAAACTTCGAGAAGAAAATAAAGCCATGAGAGAAATTTCCAAGAAAAAAATTGGCTGTCCCAATTGTGGAACTGCCGACGCTACT
CAAGACGACCTC
Protein sequenceShow/hide protein sequence
LVDHGCQLKRRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMREISKKKIGCPNCGTADAT
QDDL